{ "type": "genome", "identifier": "GCA_020849175.1", "organism": "Deltaproteobacteria bacterium", "title": "Deltaproteobacteria bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "University of Gothenburg", "publication": [ {} ], "properties": { "assembly_accession": "GCA_020849175.1", "bioproject": "PRJNA611787", "biosample": "SAMN16439668", "wgs_master": "JADLGR000000000.1", "refseq_category": "na", "taxid": "2026735", "species_taxid": "2026735", "organism_name": "Deltaproteobacteria bacterium", "infraspecific_name": "", "isolate": "SJ448", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/11/12", "asm_name": "ASM2084917v1", "submitter": "University of Gothenburg", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/849/175/GCA_020849175.1_ASM2084917v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-11-12", "dateModified": "2021-11-12", "datePublished": "2021-11-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Deltaproteobacteria bacterium" ], "sample_taxid": [ "2026735" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Sweden: Sjolunda WWTP" ], "sample_host_location_id": [], "data_size": "1.067 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 13.66, "strain_heterogeneity": 35.71, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3951020", "Number of Sequences": "371", "Longest Sequences (bp)": "50738", "N50 (bp)": "14947", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "69.8", "Number of CDSs": "3100", "Average Protein Length": "344.8", "Coding Ratio (%)": "81.2", "Number of rRNAs": "1", "Number of tRNAs": "50", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Vulcaniibacterium thermophilum", "strain": "strain=KCTC 32020", "accession": "GCA_007923255.1", "taxid": 1169913, "species_taxid": 1169913, "relation_to_type": "type", "validated": true, "ani": 75.2794, "matched_fragments": 99, "total_fragments": 1128, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vulcaniibacterium thermophilum", "strain": "strain=KCTC 32020", "accession": "GCA_014656335.1", "taxid": 1169913, "species_taxid": 1169913, "relation_to_type": "type", "validated": true, "ani": 75.255, "matched_fragments": 99, "total_fragments": 1128, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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"accession": "GCA_011317485.1", "taxid": 1920512, "species_taxid": 1920512, "relation_to_type": "type", "validated": true, "ani": 75.1651, "matched_fragments": 112, "total_fragments": 1128, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas salinisoli", "strain": "strain=SJ-92", "accession": "GCA_013425525.1", "taxid": 2752307, "species_taxid": 2752307, "relation_to_type": "type", "validated": true, "ani": 75.146, "matched_fragments": 97, "total_fragments": 1128, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas yantingensis", "strain": "strain=DSM 27244", "accession": "GCA_014199325.1", "taxid": 1241761, "species_taxid": 1241761, "relation_to_type": "type", "validated": true, "ani": 75.1447, "matched_fragments": 63, "total_fragments": 1128, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseiarcus fermentans", "strain": "strain=DSM 24875", "accession": "GCA_003315135.1", "taxid": 1473586, "species_taxid": 1473586, "relation_to_type": "type", "validated": true, "ani": 75.1189, "matched_fragments": 125, "total_fragments": 1128, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioflavicoccus mobilis", "strain": "strain=8321", "accession": "GCA_000327045.1", "taxid": 80679, "species_taxid": 80679, "relation_to_type": "type", "validated": true, "ani": 75.0954, "matched_fragments": 63, "total_fragments": 1128, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteitalea pratensis", "strain": "strain=DSM 100886; HEG_-6_39", "accession": "GCA_001618865.1", "taxid": 1855912, "species_taxid": 1855912, "relation_to_type": "type", "validated": true, "ani": 75.0794, "matched_fragments": 102, "total_fragments": 1128, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aureimonas phyllosphaerae", "strain": "strain=DSM 25024", "accession": "GCA_014196405.1", "taxid": 1166078, "species_taxid": 1166078, "relation_to_type": 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