{ "type": "genome", "identifier": "GCA_020850975.1", "organism": "Burkholderiales bacterium", "title": "Burkholderiales bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "University of Gothenburg", "publication": [ {} ], "properties": { "assembly_accession": "GCA_020850975.1", "bioproject": "PRJNA611787", "biosample": "SAMN16439813", "wgs_master": "JADZDQ000000000.1", "refseq_category": "na", "taxid": "1891238", "species_taxid": "1891238", "organism_name": "Burkholderiales bacterium", "infraspecific_name": "", "isolate": "SJ784", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/11/12", "asm_name": "ASM2085097v1", "submitter": "University of Gothenburg", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/850/975/GCA_020850975.1_ASM2085097v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-11-12", "dateModified": "2021-11-12", "datePublished": "2021-11-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Burkholderiales bacterium" ], "sample_taxid": [ "1891238" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Sweden: Sjolunda WWTP" ], "sample_host_location_id": [], "data_size": "1.366 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 66.67, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "4920259", "Number of Sequences": "153", "Longest Sequences (bp)": "314061", "N50 (bp)": "73691", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "65.5", "Number of CDSs": "4327", "Average Protein Length": "330.9", "Coding Ratio (%)": "87.3", "Number of rRNAs": "0", "Number of tRNAs": "38", "Number of CRISPRs": "4" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Rhodocyclus purpureus", "strain": "strain=DSM 168", "accession": "GCA_016653115.1", "taxid": 1067, "species_taxid": 1067, "relation_to_type": "type", "validated": true, "ani": 76.5419, "matched_fragments": 130, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera aromatica", "strain": "strain=K172", "accession": "GCA_003030465.1", "taxid": 59405, "species_taxid": 59405, "relation_to_type": "type", "validated": true, "ani": 76.3639, "matched_fragments": 137, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodocyclus tenuis", "strain": "strain=2761", "accession": "GCA_009469755.1", "taxid": 1066, "species_taxid": 1066, "relation_to_type": "type", "validated": true, "ani": 76.3413, "matched_fragments": 147, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodocyclus tenuis", "strain": "strain=2761", "accession": "GCA_014197755.1", "taxid": 1066, "species_taxid": 1066, "relation_to_type": "type", "validated": true, "ani": 76.3343, "matched_fragments": 144, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera butanivorans", "strain": "strain=NBRC 103042", "accession": "GCA_001591165.1", "taxid": 86174, "species_taxid": 86174, "relation_to_type": "type", "validated": true, "ani": 76.3288, "matched_fragments": 163, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Usitatibacter palustris", "strain": "strain=Swamp67", "accession": "GCA_013003985.1", "taxid": 2732487, "species_taxid": 2732487, "relation_to_type": "type", "validated": true, "ani": 76.2343, "matched_fragments": 141, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera chlorobenzoica", "strain": "strain=3CB1", "accession": "GCA_001922305.1", "taxid": 96773, "species_taxid": 96773, "relation_to_type": "type", "validated": true, "ani": 76.2177, "matched_fragments": 145, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera chlorobenzoica", "strain": "strain=3CB-1", "accession": "GCA_900108255.1", "taxid": 96773, "species_taxid": 96773, "relation_to_type": "type", "validated": true, "ani": 76.1713, "matched_fragments": 147, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera aminoaromatica", "strain": "strain=S2", "accession": "GCA_000310185.1", "taxid": 164330, "species_taxid": 164330, "relation_to_type": "type", "validated": true, "ani": 76.0382, "matched_fragments": 157, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera humireducens", "strain": "strain=SgZ-1", "accession": "GCA_001051995.2", "taxid": 1134435, "species_taxid": 1134435, "relation_to_type": "type", "validated": true, "ani": 76.033, "matched_fragments": 130, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ottowia beijingensis", "strain": "strain=GCS-AN-3", "accession": "GCA_013423955.1", "taxid": 1207057, "species_taxid": 1207057, "relation_to_type": "type", "validated": true, "ani": 75.9815, "matched_fragments": 119, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aromatoleum aromaticum", "strain": "strain=EbN1", "accession": "GCA_000025965.1", "taxid": 551760, "species_taxid": 551760, "relation_to_type": "type", "validated": true, "ani": 75.9736, "matched_fragments": 137, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ralstonia pseudosolanacearum", "strain": "strain=LMG 9673", "accession": "GCA_024925465.1", "taxid": 1310165, "species_taxid": 1310165, "relation_to_type": "type", "validated": true, "ani": 75.9447, "matched_fragments": 156, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ralstonia pseudosolanacearum", "strain": "strain=LMG 9673", "accession": "GCA_919586305.1", "taxid": 1310165, "species_taxid": 1310165, "relation_to_type": "type", "validated": true, "ani": 75.9292, "matched_fragments": 156, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aromatoleum tolulyticum", "strain": "strain=ATCC 51758", "accession": "GCA_900156155.1", "taxid": 34027, "species_taxid": 34027, "relation_to_type": "type", "validated": true, "ani": 75.9132, "matched_fragments": 173, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera phenylacetica", "strain": "strain=B4P", "accession": "GCA_000310225.1", "taxid": 164400, "species_taxid": 164400, "relation_to_type": "type", "validated": true, "ani": 75.8788, "matched_fragments": 188, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter pinisoli", "strain": "strain=MAH-25", "accession": "GCA_009758015.1", "taxid": 2682844, "species_taxid": 2682844, "relation_to_type": "type", "validated": true, "ani": 75.7081, "matched_fragments": 160, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Zoogloea ramigera", "strain": "strain=NBRC 15342", "accession": "GCA_006539865.1", "taxid": 350, "species_taxid": 350, "relation_to_type": "type", "validated": true, "ani": 75.6699, "matched_fragments": 123, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoduganella flava", "strain": "strain=CGMCC 1.10685", "accession": "GCA_007830495.1", "taxid": 871742, "species_taxid": 871742, "relation_to_type": "type", "validated": true, "ani": 75.643, "matched_fragments": 140, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jeongeupia chitinilytica", "strain": "strain=KCTC 23701", "accession": "GCA_014652315.1", "taxid": 1041641, "species_taxid": 1041641, "relation_to_type": "type", "validated": true, "ani": 75.6389, "matched_fragments": 100, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter humi", "strain": "strain=18x22-1", "accession": "GCA_004681975.1", "taxid": 2530451, "species_taxid": 2530451, "relation_to_type": "type", "validated": true, "ani": 75.6213, "matched_fragments": 142, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerotilus sulfidivorans", "strain": "strain=D-501", "accession": "GCA_013426975.1", "taxid": 639200, "species_taxid": 639200, "relation_to_type": "type", "validated": true, "ani": 75.5815, "matched_fragments": 153, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia glumae", "strain": "strain=LMG 2196", "accession": "GCA_902832765.1", "taxid": 337, "species_taxid": 337, "relation_to_type": "type", "validated": true, "ani": 75.5769, "matched_fragments": 220, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia glumae", "strain": "strain=ATCC 33617", "accession": "GCA_000960995.1", "taxid": 337, "species_taxid": 337, "relation_to_type": "type", "validated": true, "ani": 75.5706, "matched_fragments": 219, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia plantarii", "strain": "strain=LMG 9035", "accession": "GCA_902832905.1", "taxid": 41899, "species_taxid": 41899, "relation_to_type": "type", "validated": true, "ani": 75.5634, "matched_fragments": 224, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia plantarii", "strain": "strain=ATCC 43733", "accession": "GCA_001411805.1", "taxid": 41899, "species_taxid": 41899, "relation_to_type": "type", "validated": true, "ani": 75.5487, "matched_fragments": 224, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium aquaticum", "strain": "strain=DSM 19852", "accession": "GCA_021129195.1", "taxid": 467180, "species_taxid": 467180, "relation_to_type": "type", "validated": true, "ani": 75.5304, "matched_fragments": 87, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vogesella indigofera", "strain": "strain=DSM 3303", "accession": "GCA_003633895.1", "taxid": 45465, "species_taxid": 45465, "relation_to_type": "type", "validated": true, "ani": 75.5002, "matched_fragments": 96, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium subtsugae", "strain": "strain=PRAA4-1", "accession": "GCA_001676875.1", "taxid": 251747, "species_taxid": 251747, "relation_to_type": "type", "validated": true, "ani": 75.4982, "matched_fragments": 93, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium sphagni", "strain": "strain=IIBBL 14B-1", "accession": "GCA_001855555.1", "taxid": 1903179, "species_taxid": 1903179, "relation_to_type": "type", "validated": true, "ani": 75.3183, "matched_fragments": 89, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Solimonas variicoloris", "strain": "strain=DSM 15731", "accession": "GCA_000382285.1", "taxid": 254408, "species_taxid": 254408, "relation_to_type": "type", "validated": true, "ani": 75.2513, "matched_fragments": 148, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 66.67, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_011525945.1", "gtdb_species": "s__WYBJ01 sp011525945", "ani": 99.122, "matched_fragments": 1231, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__WYBJ01;g__WYBJ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_009377585.1", "gtdb_species": "s__WYBJ01 sp009377585", "ani": 83.1323, "matched_fragments": 962, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__WYBJ01;g__WYBJ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001770655.1", "gtdb_species": "s__2-12-FULL-68-20 sp001770655", "ani": 76.6877, "matched_fragments": 189, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__2-12-FULL-68-20", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.77", "min_intra_species_ani": "99.77", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_011046905.1", "gtdb_species": "s__DSOT01 sp011046905", "ani": 76.6602, "matched_fragments": 291, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__DSOT01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_019137045.1", "gtdb_species": "s__JAGVSZ01 sp019137045", "ani": 76.5633, "matched_fragments": 215, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__JAGVSZ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016653115.1", "gtdb_species": "s__Rhodocyclus purpureus", "ani": 76.5112, "matched_fragments": 132, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Rhodocyclus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016720425.1", "gtdb_species": "s__CAIWHR01 sp016720425", "ani": 76.5058, "matched_fragments": 195, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__CAIWHR01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.60", "min_intra_species_ani": "97.38", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.90", "num_clustered_genomes": 10, "status": "-" }, { "accession": "GCA_018971195.1", "gtdb_species": "s__VBCG01 sp018971195", "ani": 76.4324, "matched_fragments": 130, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__VBCG01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016868295.1", "gtdb_species": "s__Desulfobacillus sp016868295", "ani": 76.4229, "matched_fragments": 172, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Desulfobacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001303445.1", "gtdb_species": "s__SG8-39 sp001303445", "ani": 76.3767, "matched_fragments": 151, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__SG8-39", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016868105.1", "gtdb_species": "s__RBG-16-66-20 sp016868105", "ani": 76.3729, "matched_fragments": 145, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__RBG-16-66-20", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001770475.1", "gtdb_species": "s__2-02-FULL-66-14 sp001770475", "ani": 76.2242, "matched_fragments": 121, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__2-02-FULL-66-14", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001771985.1", "gtdb_species": "s__DSOT01 sp001771985", "ani": 76.1957, "matched_fragments": 196, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__DSOT01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903912485.1", "gtdb_species": "s__CAIWHR01 sp903912485", "ani": 76.1613, "matched_fragments": 191, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__CAIWHR01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.88", "min_intra_species_ani": "99.81", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_016192835.1", "gtdb_species": "s__PALSA-1004 sp016192835", "ani": 76.1444, "matched_fragments": 233, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__PALSA-1004", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016202565.1", "gtdb_species": "s__DSOT01 sp016202565", "ani": 76.1002, "matched_fragments": 178, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__DSOT01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017880745.1", "gtdb_species": "s__2-12-FULL-64-23 sp017880745", "ani": 76.075, "matched_fragments": 114, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__2-12-FULL-64-23", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016199485.1", "gtdb_species": "s__JACQGO01 sp016199485", "ani": 76.053, "matched_fragments": 198, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__JACQGO01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007997035.1", "gtdb_species": "s__Ralstonia sp007997035", "ani": 75.7046, "matched_fragments": 102, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ralstonia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000960995.1", "gtdb_species": "s__Burkholderia glumae", "ani": 75.5813, "matched_fragments": 217, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.66", "min_intra_species_ani": "99.30", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.92", "num_clustered_genomes": 18, "status": "-" }, { "accession": "GCF_001411805.1", "gtdb_species": "s__Burkholderia plantarii", "ani": 75.5586, "matched_fragments": 222, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.45", "min_intra_species_ani": "95.52", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.88", "num_clustered_genomes": 5, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.239, "cell_length": 0.156, "doubling_h": 0.378, "growth_tmp": 29.607, "optimum_tmp": 29.969, "optimum_ph": 6.903, "genome_size": 5778279.099, "gc_content": 62.976, "coding_genes": 5025.666, "rRNA16S_genes": 3.776, "tRNA_genes": 58.305, "gram_stain": 0.0, "sporulation": 0.013, "motility": 0.751, "range_salinity": 0.26, "facultative_respiration": 0.09, "anaerobic_respiration": 0.028, "aerobic_respiration": 0.88, "mesophilic_range_tmp": 0.982, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.017, "bacillus_cell_shape": 0.893, "coccus_cell_shape": 0.035, "filament_cell_shape": 0.003, "coccobacillus_cell_shape": 0.031, "vibrio_cell_shape": 0.021, "spiral_cell_shape": 0.014 }, "_gtdb_taxon": [ "d__Bacteria", "p__Pseudomonadota", "c__Gammaproteobacteria", "o__Burkholderiales", "f__WYBJ01", "g__WYBJ01", "s__WYBJ01 sp011525945" ], "_genome_taxon": [ "Burkholderiales", "bacterium", "d__Bacteria", "p__Pseudomonadota", "c__Gammaproteobacteria", "o__Burkholderiales", "f__WYBJ01", "g__WYBJ01", "s__WYBJ01 sp011525945", "Bacteria", "Pseudomonadota", "Gammaproteobacteria", "Burkholderiales", "WYBJ01", "WYBJ01", "WYBJ01", "sp011525945" ], "_meo": [ { "id": "MEO_0000035", "label": "waste water" }, { "id": "MEO_0000119", "label": "bioreactor" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }