{ "type": "genome", "identifier": "GCA_020851535.1", "organism": "Rhodocyclaceae bacterium", "title": "Rhodocyclaceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "University of Gothenburg", "publication": [ {} ], "properties": { "assembly_accession": "GCA_020851535.1", "bioproject": "PRJNA611787", "biosample": "SAMN16439792", "wgs_master": "JADZCO000000000.1", "refseq_category": "na", "taxid": "1898103", "species_taxid": "1898103", "organism_name": "Rhodocyclaceae bacterium", "infraspecific_name": "", "isolate": "SJ726", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/11/12", "asm_name": "ASM2085153v1", "submitter": "University of Gothenburg", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/851/535/GCA_020851535.1_ASM2085153v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-11-12", "dateModified": "2021-11-12", "datePublished": "2021-11-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Rhodocyclaceae bacterium" ], "sample_taxid": [ "1898103" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Sweden: Sjolunda WWTP" ], "sample_host_location_id": [], "data_size": "0.773 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 87.12, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2770410", "Number of Sequences": "137", "Longest Sequences (bp)": "116543", "N50 (bp)": "37730", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "65.1", "Number of CDSs": "2516", "Average Protein Length": "321.5", "Coding Ratio (%)": "87.6", "Number of rRNAs": "0", "Number of tRNAs": "34", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Thauera aromatica", "strain": "strain=K172", "accession": "GCA_003030465.1", "taxid": 59405, "species_taxid": 59405, "relation_to_type": "type", "validated": true, "ani": 77.105, "matched_fragments": 124, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera phenolivorans", "strain": "strain=ZV1C", "accession": "GCA_001696715.1", "taxid": 1792543, "species_taxid": 1792543, "relation_to_type": "type", "validated": true, "ani": 76.7795, "matched_fragments": 139, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera butanivorans", "strain": "strain=NBRC 103042", "accession": 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera terpenica", "strain": "strain=58Eu", "accession": "GCA_000443165.1", "taxid": 76113, "species_taxid": 76113, "relation_to_type": "type", "validated": true, "ani": 76.3285, "matched_fragments": 116, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pandoraea apista", "strain": "strain=DSM 16535", "accession": "GCA_001465595.2", "taxid": 93218, "species_taxid": 93218, "relation_to_type": "type", "validated": true, "ani": 75.9413, "matched_fragments": 58, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pandoraea apista", "strain": "strain=LMG16407", "accession": "GCA_001049515.1", "taxid": 93218, "species_taxid": 93218, "relation_to_type": "type", "validated": true, "ani": 75.8728, "matched_fragments": 59, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Propionivibrio 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