{
    "type": "genome",
    "identifier": "GCA_020853095.1",
    "organism": "Phycisphaerales bacterium",
    "title": "Phycisphaerales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Gothenburg",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020853095.1",
        "bioproject": "PRJNA611787",
        "biosample": "SAMN16439729",
        "wgs_master": "JADYZN000000000.1",
        "refseq_category": "na",
        "taxid": "2052180",
        "species_taxid": "2052180",
        "organism_name": "Phycisphaerales bacterium",
        "infraspecific_name": "",
        "isolate": "SJ572",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/11/12",
        "asm_name": "ASM2085309v1",
        "submitter": "University of Gothenburg",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/853/095/GCA_020853095.1_ASM2085309v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-11-12",
    "dateModified": "2021-11-12",
    "datePublished": "2021-11-12",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Phycisphaerales bacterium"
        ],
        "sample_taxid": [
            "2052180"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Sweden: Sjolunda WWTP"
        ],
        "sample_host_location_id": [],
        "data_size": "1.012 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3609737",
        "Number of Sequences": "77",
        "Longest Sequences (bp)": "230995",
        "N50 (bp)": "78760",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "59.8",
        "Number of CDSs": "3181",
        "Average Protein Length": "340.9",
        "Coding Ratio (%)": "90.1",
        "Number of rRNAs": "1",
        "Number of tRNAs": "48",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Humisphaera borealis",
                "strain": "strain=M1803",
                "accession": "GCA_015169395.1",
                "taxid": 2807512,
                "species_taxid": 2807512,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4925,
                "matched_fragments": 116,
                "total_fragments": 1169,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paludisphaera soli",
                "strain": "strain=JC670",
                "accession": "GCA_011064595.1",
                "taxid": 2712865,
                "species_taxid": 2712865,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2588,
                "matched_fragments": 54,
                "total_fragments": 1169,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Posidoniimonas polymericola",
                "strain": "strain=Pla123a",
                "accession": "GCA_007859935.1",
                "taxid": 2528002,
                "species_taxid": 2528002,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2365,
                "matched_fragments": 50,
                "total_fragments": 1169,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tautonia plasticadhaerens",
                "strain": "strain=ElP",
                "accession": "GCA_007752535.1",
                "taxid": 2527974,
                "species_taxid": 2527974,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.842,
                "matched_fragments": 59,
                "total_fragments": 1169,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Azospirillum cavernae",
                "strain": "strain=K2W22B-5",
                "accession": "GCA_003590795.1",
                "taxid": 2320860,
                "species_taxid": 2320860,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7436,
                "matched_fragments": 66,
                "total_fragments": 1169,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002311745.1",
                "gtdb_species": "s__UBA1161 sp002311745",
                "ani": 77.0117,
                "matched_fragments": 144,
                "total_fragments": 1169,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Tepidisphaerales;f__Tepidisphaeraceae;g__UBA1161",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011367345.1",
                "gtdb_species": "s__DSYW01 sp011367345",
                "ani": 76.7782,
                "matched_fragments": 190,
                "total_fragments": 1169,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Tepidisphaerales;f__Tepidisphaeraceae;g__DSYW01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_015169395.1",
                "gtdb_species": "s__Humisphaera borealis",
                "ani": 76.4925,
                "matched_fragments": 116,
                "total_fragments": 1169,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Tepidisphaerales;f__Tepidisphaeraceae;g__Humisphaera",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003153655.1",
                "gtdb_species": "s__PALSA-1353 sp003153655",
                "ani": 76.0954,
                "matched_fragments": 93,
                "total_fragments": 1169,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Tepidisphaerales;f__Tepidisphaeraceae;g__PALSA-1353",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014379105.1",
                "gtdb_species": "s__JACMML01 sp014379105",
                "ani": 75.9833,
                "matched_fragments": 74,
                "total_fragments": 1169,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Tepidisphaerales;f__Tepidisphaeraceae;g__JACMML01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011358525.1",
                "gtdb_species": "s__DTNO01 sp011358525",
                "ani": 75.7933,
                "matched_fragments": 59,
                "total_fragments": 1169,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Tepidisphaerales;f__Tepidisphaeraceae;g__DTNO01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903871935.1",
                "gtdb_species": "s__CAIQIQ01 sp903871935",
                "ani": 75.757,
                "matched_fragments": 95,
                "total_fragments": 1169,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Tepidisphaerales;f__Tepidisphaeraceae;g__CAIQIQ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.93",
                "min_intra_species_ani": "99.88",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 13,
                "status": "-"
            },
            {
                "accession": "GCA_014380825.1",
                "gtdb_species": "s__JACMJD01 sp014380825",
                "ani": 75.6989,
                "matched_fragments": 76,
                "total_fragments": 1169,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Tepidisphaerales;f__Tepidisphaeraceae;g__JACMJD01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": 25.0,
        "optimum_ph": null,
        "genome_size": 3884381.5,
        "gc_content": 72.147,
        "coding_genes": 3146.0,
        "rRNA16S_genes": 1.0,
        "tRNA_genes": 46.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 1.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Phycisphaerae",
        "o__Tepidisphaerales",
        "f__Tepidisphaeraceae",
        "g__JADYZN01",
        "s__JADYZN01 sp020853095"
    ],
    "_genome_taxon": [
        "Phycisphaerales",
        "bacterium",
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Phycisphaerae",
        "o__Tepidisphaerales",
        "f__Tepidisphaeraceae",
        "g__JADYZN01",
        "s__JADYZN01 sp020853095",
        "Bacteria",
        "Planctomycetota",
        "Phycisphaerae",
        "Tepidisphaerales",
        "Tepidisphaeraceae",
        "JADYZN01",
        "JADYZN01",
        "sp020853095"
    ],
    "_meo": [
        {
            "id": "MEO_0000035",
            "label": "waste water"
        },
        {
            "id": "MEO_0000119",
            "label": "bioreactor"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}