# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_6	LOCUS_00060	sequence001:4213..4731(-)	partial			WP_004198682.1	recombination regulator RecX	80.8	42.5	53.2
MGA_18	LOCUS_00180	sequence001:17089..19353(-)	partial			WP_004526440.1	DUF4118 domain-containing protein	96.9	74.3	49.1
MGA_46	LOCUS_00460	sequence001:49185..49718(+)	partial			WP_004198004.1	protein-export chaperone SecB	71.8	79.9	59.1
MGA_54	LOCUS_00540	sequence001:55011..55583(+)	partial			WP_004202928.1	c-type cytochrome	95.8	59.5	50.3
MGA_71	LOCUS_00710	sequence001:76448..77134(+)	partial			WP_149323728.1	calcium-binding protein	91.7	15.4	29.4
MGA_98	LOCUS_00960	sequence002:6021..7334(-)	frameshift		7332,7351	WP_102804916.1	3-phosphoshikimate 1-carboxyvinyltransferase	99.5	57.4	59.5
MGA_99	LOCUS_00970	sequence002:7343..8233(-)	frameshift		7354,7332	WP_102804916.1	3-phosphoshikimate 1-carboxyvinyltransferase	92.6	37.5	53.5
MGA_106	LOCUS_01040	sequence002:17452..18000(-)	partial			WP_011070774.1	A24 family peptidase	89.6	52.3	41.1
MGA_113	LOCUS_01110	sequence002:24678..24929(-)	frameshift		24976	WP_024900429.1	leucyl/phenylalanyl-tRNA--protein transferase	95.2	30.6	48.1
MGA_114	LOCUS_01120	sequence002:24935..25405(-)	frameshift		24976	WP_024900429.1	leucyl/phenylalanyl-tRNA--protein transferase	91.7	56.1	60.8
MGA_160	LOCUS_01580	sequence003:1..1066(+)	partial			WP_004197235.1	lytic transglycosylase domain-containing protein	96.0	52.1	55.9
MGA_169	LOCUS_01670	sequence003:11020..12459(-)	partial			WP_011088341.1	glycosyltransferase family 39 protein	48.4	41.4	24.7
MGA_191	LOCUS_01890	sequence003:38768..39223(-)	internal_stop_codon	39248..39250(-)		WP_003814597.1	4-hydroxyphenylpyruvate dioxygenase	97.4	40.0	72.3
MGA_192	LOCUS_01900	sequence003:39248..39868(-)	internal_stop_codon	39248..39250(-)		WP_004197900.1	4-hydroxyphenylpyruvate dioxygenase	97.6	55.1	77.1
MGA_202	LOCUS_02000	sequence003:51325..53337(+)	partial			WP_063921503.1	M10 family metallopeptidase C-terminal domain-containing protein	45.2	29.3	26.7
MGA_211	LOCUS_02090	sequence003:59193..59708(-)	partial			WP_011083833.1	thiosulfate oxidation carrier protein SoxY	67.3	70.6	38.3
MGA_214	LOCUS_02120	sequence003:61869..62192(-)	partial			WP_004557316.1	c-type cytochrome	76.6	42.3	31.9
MGA_215	LOCUS_02130	sequence003:62195..63085(-)	partial			WP_004524381.1	BON domain-containing protein	69.6	79.7	37.7
MGA_220	LOCUS_02180	sequence004:1225..2217(+)	partial			WP_004194498.1	ParB/RepB/Spo0J family partition protein	78.5	74.9	25.7
MGA_228	LOCUS_02260	sequence004:9980..10723(+)	partial			WP_011107033.1	conjugal transfer protein TraT	50.6	54.3	32.8
MGA_239	LOCUS_02370	sequence004:22661..23218(-)	partial			WP_001055900.1	conjugal transfer protein	55.1	83.5	36.9
MGA_240	LOCUS_02380	sequence004:23172..25421(-)	partial			WP_001141540.1	DUF5710 domain-containing protein	80.8	45.2	22.0
MGA_246	LOCUS_02440	sequence004:28768..29724(+)	partial			WP_000151588.1	IncI1-type conjugal transfer protein TrbB	48.7	43.5	33.3
MGA_247	LOCUS_02450	sequence004:29724..31001(+)	partial			WP_000918829.1	DNA primase	93.4	68.7	38.6
MGA_248	LOCUS_02460	sequence004:31224..33224(+)	partial			WP_011107040.1	F-type conjugative transfer protein TrbC	83.6	70.9	37.3
MGA_258	LOCUS_02560	sequence004:42126..43121(+)	partial			WP_153437801.1	GspE/PulE family protein	41.7	24.5	37.6
MGA_260	LOCUS_02580	sequence004:43610..44821(+)	partial			WP_003425014.1	shufflon system plasmid conjugative transfer pilus tip adhesin PilV	87.3	68.2	31.5
MGA_261	LOCUS_02590	sequence004:44824..45531(+)	partial			WP_011393114.1	lytic transglycosylase domain-containing protein	48.1	54.9	53.9
MGA_268	LOCUS_02660	sequence004:50899..52482(-)	partial			WP_011103425.1	relaxase/mobilization nuclease domain-containing protein	95.8	65.1	36.6
MGA_276	LOCUS_02730	sequence005:583..4743(+)	partial			WP_004535491.1	FAD/FMN-binding oxidoreductase	62.3	65.3	71.6
MGA_277	LOCUS_02740	sequence005:4990..5466(+)	partial			WP_004550872.1	HIT family protein	74.7	75.5	48.7
MGA_281	LOCUS_02780	sequence005:13029..13991(+)	partial			WP_004200429.1	lytic transglycosylase domain-containing protein	52.2	44.3	53.9
MGA_292	LOCUS_02890	sequence005:26746..27240(-)	partial			WP_015040551.1	TlpA disulfide reductase family protein	70.7	63.2	37.9
MGA_308	LOCUS_03050	sequence006:3133..4287(+)	partial			WP_011674550.1	Stk1 family PASTA domain-containing Ser/Thr kinase	49.2	28.5	26.5
MGA_312	LOCUS_03090	sequence006:8228..9214(-)	partial			WP_004522862.1	signal recognition particle-docking protein FtsY	93.6	70.6	64.8
MGA_319	LOCUS_03160	sequence006:14853..17498(-)	partial			WP_004192715.1	Rne/Rng family ribonuclease	67.3	55.9	76.9
MGA_321	LOCUS_03180	sequence006:19006..19494(+)	partial			WP_004524610.1	HAD-IA family hydrolase	77.8	57.5	52.4
MGA_330	LOCUS_03270	sequence006:31490..32206(+)	internal_stop_codon	32204..32206(+)		WP_004189876.1	LPS-assembly protein LptD	63.9	19.6	36.4
MGA_331	LOCUS_03280	sequence006:32228..33808(+)	internal_stop_codon	32204..32206(+)		WP_004189876.1	LPS-assembly protein LptD	98.9	66.3	40.8
MGA_332	LOCUS_03290	sequence006:33792..34826(+)	partial			WP_004550859.1	peptidylprolyl isomerase	46.2	35.5	38.4
MGA_336	LOCUS_03330	sequence006:38370..>38966(-)	partial			WP_004522261.1	lipopolysaccharide heptosyltransferase I	92.9	58.0	50.5
MGA_337	LOCUS_03340	sequence007:1..1663(+)	partial			WP_014917883.1	ATP-dependent DNA helicase RecG	99.8	61.9	66.4
MGA_353	LOCUS_03500	sequence007:18332..19048(+)	partial			WP_004527343.1	DNA-3-methyladenine glycosylase	86.1	65.7	66.8
MGA_365	LOCUS_03620	sequence007:29758..31062(-)	partial			WP_056938256.1	Stk1 family PASTA domain-containing Ser/Thr kinase	43.3	27.8	29.9
MGA_366	LOCUS_03630	sequence007:31259..32878(-)	partial			WP_000904759.1	serine/threonine protein kinase PrkC	34.9	28.9	32.5
MGA_389	LOCUS_03850	sequence008:32919..33146(-)	partial			WP_011083363.1	4a-hydroxytetrahydrobiopterin dehydratase	85.3	64.0	62.5
MGA_395	LOCUS_03900	sequence009:232..750(-)	partial			WP_004192286.1	C40 family peptidase	94.2	43.0	45.3
MGA_408	LOCUS_04030	sequence009:11798..12658(-)	partial			WP_011035702.1	peptidoglycan DD-metalloendopeptidase family protein	32.5	14.6	40.9
MGA_412	LOCUS_04070	sequence009:15506..16264(+)	internal_stop_codon	16262..16264(+)		WP_004193856.1	homoserine dehydrogenase	100.0	56.6	66.8
MGA_413	LOCUS_04080	sequence009:16283..16861(+)	internal_stop_codon	16262..16264(+)		WP_004193856.1	homoserine dehydrogenase	93.2	41.2	59.3
MGA_427	LOCUS_04220	sequence010:4396..7218(-)	partial			WP_063172153.1	autotransporter domain-containing protein	95.5	71.2	21.6
MGA_444	LOCUS_04390	sequence010:22843..26400(+)	partial			WP_011816940.1	filamentous hemagglutinin N-terminal domain-containing protein	97.3	57.6	26.6
MGA_446	LOCUS_04410	sequence010:28403..29470(+)	partial			WP_004526023.1	cytochrome c oxidase subunit II	99.2	67.0	65.9
MGA_463	LOCUS_04560	sequence011:10047..10841(-)	partial			WP_004193321.1	ribonuclease III	91.7	52.5	62.9
MGA_468	LOCUS_04610	sequence011:15707..15937(-)	partial			WP_015370249.1	RnfH family protein	82.9	68.8	42.4
MGA_477	LOCUS_04700	sequence011:26348..26959(+)	partial			WP_011072497.1	response regulator	74.9	81.8	25.6
MGA_485	LOCUS_04760	sequence012:3927..4988(-)	partial			WP_011204087.1	bifunctional transcriptional regulator/glucokinase	95.8	52.1	51.6
MGA_512	LOCUS_05030	sequence013:2097..3380(+)	partial			WP_013087198.1	F-type conjugal transfer pilus assembly protein TraB	79.6	73.0	28.2
MGA_515	LOCUS_05060	sequence013:4769..6025(+)	partial			WP_013087338.1	TraC family protein	83.0	43.9	27.6
MGA_521	LOCUS_05120	sequence013:11033..11731(+)	partial			WP_011331483.1	type-F conjugative transfer system pilin assembly protein TrbC	61.2	58.0	30.1
MGA_523	LOCUS_05140	sequence013:12804..14087(+)	partial			WP_013087340.1	conjugal transfer protein TraN	90.6	69.0	25.4
MGA_525	LOCUS_05160	sequence013:14451..15260(+)	partial			WP_000197598.1	thioredoxin family protein	78.8	64.4	27.3
MGA_528	LOCUS_05190	sequence013:17685..20873(+)	partial			WP_001007080.1	conjugal transfer mating-pair stabilization protein TraG	53.2	56.4	22.6
MGA_532	LOCUS_05230	sequence013:23674..26721(+)	partial			WP_013087386.1	MobF family relaxase	98.5	58.9	29.1
MGA_535	LOCUS_05260	sequence013:27556..>28680(-)	partial			WP_104272554.1	type IV conjugative transfer system coupling protein TraD	95.7	58.1	33.8
MGA_578	LOCUS_05680	sequence015:19062..19247(+)	frameshift		19241	WP_004524370.1	NAD(P)-dependent oxidoreductase	80.3	17.0	57.1
MGA_580	LOCUS_05700	sequence015:21442..25383(+)	partial			WP_010942715.1	putative Ig domain-containing protein	75.9	57.5	27.2
MGA_610	LOCUS_05980	sequence017:9372..9890(+)	partial			WP_007244070.1	YXWGXW repeat-containing protein	53.5	62.7	33.7
MGA_615	LOCUS_06030	sequence017:13842..14819(-)	partial			WP_011476458.1	nucleoid occlusion protein	54.8	61.8	31.1
MGA_618	LOCUS_06060	sequence017:17495..17899(+)	frameshift		17893	WP_003319375.1	RNA polymerase factor sigma-70	84.3	64.0	37.7
MGA_622	LOCUS_06100	sequence017:20624..24559(+)	partial			WP_110101956.1	bifunctional adenylate cyclase toxin/hemolysin CyaA	78.0	57.9	31.7
MGA_627	LOCUS_06150	sequence018:3647..4318(+)	frameshift		3506	WP_004187505.1	autophagy evasion T3SS effector BopA	45.3	20.5	29.9
MGA_628	LOCUS_06160	sequence018:4397..5134(+)	partial			WP_004187505.1	autophagy evasion T3SS effector BopA	49.0	25.2	37.2
MGA_633	LOCUS_06210	sequence018:9940..12450(+)	partial			WP_010974867.1	S8 family peptidase	42.5	37.2	25.5
MGA_636	LOCUS_06240	sequence018:13731..15671(-)	partial			WP_002211637.1	NEL-type E3 ubiquitin ligase domain-containing protein	39.0	42.7	32.9
MGA_658	LOCUS_06440	sequence019:16338..17651(+)	partial			WP_000946989.1	SPI-1 type III secretion system effector GTPase-activating protein SptP	32.5	25.6	28.2
MGA_672	LOCUS_06570	sequence020:7871..8080(-)	frameshift		8072	WP_004534800.1	fimbrial protein	89.9	19.2	43.5
MGA_679	LOCUS_06640	sequence020:16019..20440(-)	partial			WP_224144836.1	hemagglutinin repeat-containing protein	23.7	12.0	25.2
MGA_680	LOCUS_06650	sequence020:20473..>24454(-)	partial			WP_011104446.1	filamentous hemagglutinin N-terminal domain-containing protein	82.4	17.0	25.0
MGA_689	LOCUS_06730	sequence021:8380..8928(-)	partial			WP_004536085.1	hypothetical protein	70.3	64.3	26.7
MGA_691	LOCUS_06750	sequence021:10034..11032(+)	partial			WP_004534186.1	DUF3108 domain-containing protein	63.6	47.8	46.4
MGA_701	LOCUS_06850	sequence021:23768..24229(+)	partial			WP_005168573.1	response regulator transcription factor	83.0	60.5	44.9
MGA_711	LOCUS_06940	sequence022:12385..13578(-)	partial			WP_012256388.1	nucleoside hydrolase	57.7	63.6	33.2
MGA_722	LOCUS_07050	sequence023:1239..1967(-)	partial			WP_000804038.1	leucine-rich repeat domain-containing protein	78.5	46.8	33.5
MGA_741	LOCUS_07240	sequence023:21705..23564(-)	partial			WP_002216388.1	inverse autotransporter beta-barrel domain-containing protein	77.2	45.1	33.2
MGA_777	LOCUS_07580	sequence025:6021..6980(+)	partial			WP_091628724.1	FkbM family methyltransferase	80.6	20.9	32.6
MGA_783	LOCUS_07640	sequence025:10819..11478(+)	partial			WP_011807735.1	uracil-DNA glycosylase	81.7	39.3	60.3
MGA_787	LOCUS_07680	sequence025:14909..16966(+)	partial			WP_011250640.1	S8 family serine peptidase	41.2	42.1	30.5
MGA_792	LOCUS_07730	sequence026:595..918(+)	partial			WP_011119731.1	cupin domain-containing protein	95.3	68.9	47.1
MGA_816	LOCUS_07950	sequence027:1394..2776(+)	partial			WP_103701848.1	acyltransferase family protein	96.1	67.9	33.5
MGA_819	LOCUS_07980	sequence027:4730..5029(-)	internal_stop_codon	4730..4732(-)		WP_015040017.1	6-carboxytetrahydropterin synthase QueD	88.9	59.9	65.9
MGA_827	LOCUS_08060	sequence027:15230..20698(+)	partial			WP_011815969.1	S8 family serine peptidase	57.8	57.6	39.9
MGA_849	LOCUS_08250	sequence029:1907..2866(-)	partial			WP_110101956.1	bifunctional adenylate cyclase toxin/hemolysin CyaA	56.1	10.4	28.4
MGA_868	LOCUS_08440	sequence030:8471..12787(+)	partial			WP_009241452.1	YhdP family protein	50.0	50.1	33.4
MGA_877	LOCUS_08530	sequence030:21262..21597(+)	partial			WP_011267826.1	macrolide transporter subunit MacA	92.8	27.0	53.8
MGA_889	LOCUS_08640	sequence031:14677..15537(+)	partial			WP_004193146.1	fused uroporphyrinogen-III synthase HemD/membrane protein HemX	91.6	39.2	34.7
MGA_890	LOCUS_08650	sequence031:15874..16917(+)	partial			WP_004535588.1	fused uroporphyrinogen-III synthase HemD/membrane protein HemX	83.6	43.7	34.6
MGA_903	LOCUS_08780	sequence032:8202..8573(-)	partial			WP_014206134.1	nuclear transport factor 2 family protein	97.6	45.7	40.0
MGA_917	LOCUS_08920	sequence033:1..518(+)	partial			WP_010979123.1	3-oxoacyl-ACP reductase FabG	66.1	44.0	39.1
MGA_923	LOCUS_08980	sequence033:7779..8810(-)	partial			WP_004529931.1	glycosyltransferase family 2 protein	70.3	70.3	29.2
MGA_925	LOCUS_09000	sequence033:10146..10430(+)	frameshift		10096,10111	WP_004537627.1	YoaK family protein	84.0	30.7	53.2
MGA_951	LOCUS_09240	sequence035:3667..7341(+)	partial			WP_011104446.1	filamentous hemagglutinin N-terminal domain-containing protein	12.7	2.5	53.4
MGA_959	LOCUS_09320	sequence035:17405..17638(+)	partial			WP_011037754.1	DUF378 domain-containing protein	70.1	69.6	67.3
MGA_962	LOCUS_09340	sequence036:934..1665(-)	internal_stop_codon	1684..1686(-)		WP_003092132.1	LysR family transcriptional regulator	88.5	70.3	35.3
MGA_989	LOCUS_09590	sequence038:1..1681(+)	partial			WP_004527907.1	cytochrome c biogenesis protein ResB	96.6	74.9	47.9
MGA_1016	LOCUS_09840	sequence040:7161..9620(+)	partial			WP_011036966.1	filamentous hemagglutinin N-terminal domain-containing protein	80.7	21.6	30.5
MGA_1017	LOCUS_09850	sequence040:9882..10316(+)	partial			WP_149449321.1	DUF637 domain-containing protein	79.9	6.2	43.1
MGA_1023	LOCUS_09910	sequence041:5180..7030(+)	partial			WP_010958422.1	ATP-binding protein	55.7	53.9	23.2
MGA_1050	LOCUS_10160	sequence042:16152..16619(+)	partial			WP_003114910.1	CHASE2 domain-containing protein	69.7	14.2	38.2
MGA_1058	LOCUS_10230	sequence043:6400..9225(-)	partial			WP_101762974.1	phage tail tape measure protein	67.4	58.2	34.1
MGA_1059	LOCUS_10240	sequence043:9366..9659(-)	partial			WP_004531064.1	phage tail assembly protein	86.6	73.7	44.0
MGA_1064	LOCUS_10290	sequence043:12469..14034(-)	partial			WP_011104529.1	phage tail protein	58.7	44.6	52.4
MGA_1069	LOCUS_10340	sequence044:1..758(+)	partial			WP_004190655.1	MlaA family lipoprotein	84.9	64.8	49.8
MGA_1080	LOCUS_10450	sequence044:8649..8918(-)	frameshift		8947	WP_011103115.1	chorismate mutase	97.8	44.9	39.8
MGA_1081	LOCUS_10460	sequence044:8903..9247(-)	frameshift		8947	WP_011103115.1	chorismate mutase	67.5	44.9	39.8
MGA_1088	LOCUS_10520	sequence045:4810..5343(-)	frameshift		5357	WP_004200504.1	glutathione S-transferase N-terminal domain-containing protein	97.2	84.7	62.8
MGA_1098	LOCUS_10610	sequence046:1478..2512(-)	partial			WP_003592794.1	nucleoid occlusion protein	55.8	67.8	31.1
MGA_1118	LOCUS_10810	sequence047:1509..2105(+)	partial			WP_004527196.1	ankyrin repeat domain-containing protein	86.9	70.7	44.2
MGA_1122	LOCUS_10850	sequence047:6032..6853(+)	internal_stop_codon	5963..5965(+)		WP_011390231.1	methylmalonyl Co-A mutase-associated GTPase MeaB	98.2	80.2	48.9
MGA_1131	LOCUS_10940	sequence048:218..709(+)	partial			WP_011036063.1	calcium/calmodulin-dependent protein kinase type II	75.5	71.8	50.4
MGA_1133	LOCUS_10960	sequence048:2593..3078(+)	internal_stop_codon	2575..2577(+)		WP_004196340.1	crossover junction endodeoxyribonuclease RuvC	90.7	80.6	67.8
MGA_1134	LOCUS_10970	sequence048:3204..5228(-)	partial			WP_001011244.1	leucine-rich repeat domain-containing protein	31.3	48.7	38.2
MGA_1138	LOCUS_11010	sequence048:9020..9838(+)	partial			WP_003974391.1	glycosyltransferase	50.4	17.9	30.9
MGA_1141	LOCUS_11040	sequence048:11257..>14968(-)	partial			WP_012256978.1	DUF11 domain-containing protein	75.7	64.0	26.1
MGA_1148	LOCUS_11110	sequence049:5974..7899(+)	partial			WP_176994017.1	FimV/HubP family polar landmark protein	58.2	58.4	26.3
MGA_1157	LOCUS_11180	sequence050:272..1597(+)	partial			WP_005477121.1	LuxQ periplasmic sensor domain-containing protein	94.1	48.8	26.6
MGA_1163	LOCUS_11240	sequence050:8522..9907(-)	partial			WP_001244955.1	recombinase family protein	69.0	66.0	34.5
MGA_1165	LOCUS_11260	sequence050:10726..12537(-)	partial			WP_009936280.1	hypothetical protein	73.8	71.6	45.9
MGA_1187	LOCUS_11460	sequence052:6190..6534(+)	partial			WP_004192357.1	helix-hairpin-helix domain-containing protein	71.9	40.6	61.0
MGA_1195	LOCUS_11540	sequence052:13640..14083(-)	partial			WP_002209042.1	EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein SsaJ	55.8	31.7	41.5
MGA_1205	LOCUS_11640	sequence053:10661..11116(-)	partial			WP_003814065.1	cytochrome c	54.3	70.1	70.7
MGA_1215	LOCUS_11740	sequence054:9680..10924(-)	partial			WP_004521674.1	pseudouridine synthase	78.0	57.9	64.6
MGA_1216	LOCUS_11750	sequence054:10929..11597(-)	partial			WP_004555916.1	SMC-Scp complex subunit ScpB	85.6	41.5	67.9
MGA_1218	LOCUS_11770	sequence054:12991..>13883(-)	partial			WP_004539575.1	glycine C-acetyltransferase	100.0	74.7	72.1
MGA_1223	LOCUS_11820	sequence055:8859..11537(-)	partial			WP_011815296.1	hypothetical protein	34.5	51.9	29.7
MGA_1226	LOCUS_11850	sequence056:1551..2534(-)	partial			WP_004192730.1	pseudouridine synthase	78.3	45.3	64.9
MGA_1237	LOCUS_11950	sequence057:2451..6797(-)	frameshift		6799	WP_011815969.1	S8 family serine peptidase	86.4	68.4	49.1
MGA_1238	LOCUS_11960	sequence057:6779..9079(-)	frameshift		6799	WP_011815969.1	S8 family serine peptidase	46.3	18.3	34.3
MGA_1245	LOCUS_12020	sequence058:2184..2366(+)	internal_stop_codon	2364..2366(+)		WP_004527787.1	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	95.0	26.9	54.2
MGA_1246	LOCUS_12030	sequence058:2382..2804(+)	internal_stop_codon	2364..2366(+)		WP_004194286.1	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	98.6	66.3	54.3
MGA_1260	LOCUS_12150	sequence059:7169..9067(-)	partial			WP_042338787.1	cell wall-binding repeat-containing protein	38.3	10.5	25.7
MGA_1271	LOCUS_12240	sequence060:7381..8127(+)	partial			WP_010942151.1	ABC transporter ATP-binding protein	98.0	61.1	44.6
MGA_1274	LOCUS_12270	sequence060:10239..10847(+)	internal_stop_codon	10845..10847(+)		WP_009939427.1	lipopolysaccharide biosynthesis protein RfbH	98.0	44.0	72.2
MGA_1275	LOCUS_12280	sequence060:10857..11561(+)	internal_stop_codon	10845..10847(+)		WP_009939427.1	lipopolysaccharide biosynthesis protein RfbH	100.0	52.0	73.5
MGA_1294	LOCUS_12450	sequence062:3076..3795(+)	internal_stop_codon	3793..3795(+)		WP_004522738.1	hybrid sensor histidine kinase/response regulator AtsR	89.1	36.5	32.9
MGA_1295	LOCUS_12460	sequence062:3841..4848(+)	internal_stop_codon	3793..3795(+)		WP_005490914.1	ATP-binding protein	91.9	51.4	33.5
MGA_1296	LOCUS_12470	sequence062:4944..5708(+)	partial			WP_011337562.1	glycosyltransferase	44.5	25.8	33.1
MGA_1305	LOCUS_12550	sequence063:1..2273(+)	partial			WP_224144836.1	hemagglutinin repeat-containing protein	37.4	9.8	29.6
MGA_1306	LOCUS_12560	sequence063:2347..4539(+)	partial			WP_011104446.1	filamentous hemagglutinin N-terminal domain-containing protein	20.8	2.5	52.9
MGA_1309	LOCUS_12590	sequence063:7175..7639(-)	partial			WP_004195188.1	single-stranded DNA-binding protein	74.0	57.3	84.2
MGA_1315	LOCUS_12650	sequence064:3140..4630(+)	partial			WP_010918008.1	tetratricopeptide repeat protein	87.5	59.7	22.5
MGA_1318	LOCUS_12680	sequence064:7109..8302(+)	partial			WP_011117629.1	T3SS effector cysteine protease YopT	50.9	51.6	25.7
MGA_1324	LOCUS_12740	sequence065:3381..4181(+)	frameshift		4130,4182	WP_015040149.1	dethiobiotin synthase	89.1	50.4	33.1
MGA_1325	LOCUS_12750	sequence065:4178..4894(+)	frameshift		4136,4182	WP_015064000.1	dethiobiotin synthase	75.6	39.1	48.7
MGA_1333	LOCUS_12830	sequence065:11914..12246(-)	partial			WP_011268019.1	tyrosine-type recombinase/integrase	89.1	28.8	51.5
MGA_1340	LOCUS_12900	sequence066:9786..10265(-)	partial			WP_004194263.1	RNA pyrophosphohydrolase	98.7	72.7	79.6
MGA_1365	LOCUS_13140	sequence069:261..1070(+)	partial			WP_012067720.1	YDG domain-containing protein	57.2	9.3	34.0
MGA_1386	LOCUS_13330	sequence071:1488..1793(-)	partial			WP_004199405.1	GIY-YIG nuclease family protein	75.2	25.5	61.8
MGA_1393	LOCUS_13400	sequence071:10147..11196(-)	partial			WP_024901052.1	lytic murein transglycosylase B	90.0	72.4	47.0
MGA_1428	LOCUS_13740	sequence075:9477..9914(-)	partial			WP_011204126.1	outer membrane protein assembly factor BamE	86.2	46.4	54.7
MGA_1444	LOCUS_13880	sequence077:5578..6741(+)	partial			WP_002224756.1	capsular polysaccharide biosynthesis protein	79.8	45.0	43.3
MGA_1446	LOCUS_13900	sequence077:8084..8668(-)	partial			WP_013098837.1	lipid IV(A) palmitoyltransferase PagP	66.0	61.5	29.5
MGA_1487	LOCUS_14280	sequence080:7086..7835(+)	frameshift		7057	WP_004192732.1	DMT family transporter	87.6	70.6	34.4
MGA_1488	LOCUS_14290	sequence080:7939..8754(+)	partial			WP_004192881.1	patatin-like phospholipase family protein	96.3	74.9	53.1
MGA_1500	LOCUS_14390	sequence081:7550..8191(+)	partial			WP_009941345.1	N-acetylmuramidase family protein	87.8	70.0	52.4
MGA_1510	LOCUS_14480	sequence082:5384..5827(-)	partial			WP_003112364.1	signal peptidase I	83.0	66.5	33.6
MGA_1512	LOCUS_14500	sequence082:6258..8840(-)	partial			WP_013087338.1	TraC family protein	64.9	66.6	22.6
MGA_1530	LOCUS_14650	sequence084:9381..10247(-)	partial			WP_004192700.1	ATP-dependent DNA helicase	92.7	35.5	69.3
MGA_1535	LOCUS_14700	sequence085:4023..5348(-)	partial			WP_001011283.1	leucine-rich repeat domain-containing protein	44.4	59.0	40.5
MGA_1551	LOCUS_14830	sequence087:1737..4928(-)	partial			WP_096583336.1	MobF family relaxase	48.9	33.1	30.6
MGA_1553	LOCUS_14850	sequence087:5454..7013(-)	partial			WP_104272554.1	type IV conjugative transfer system coupling protein TraD	80.0	68.2	32.2
MGA_1558	LOCUS_14900	sequence087:9289..>9890(-)	partial			WP_014207873.1	DNA/RNA non-specific endonuclease	84.4	45.8	46.2
MGA_1562	LOCUS_14940	sequence088:3664..4671(+)	partial			WP_013525329.1	plasmid partitioning protein RepB	41.8	42.4	31.7
MGA_1563	LOCUS_14950	sequence088:4869..5018(-)	partial			WP_176994065.1	DUF1653 domain-containing protein	98.0	63.2	54.2
MGA_1566	LOCUS_14980	sequence088:7037..8536(-)	partial			WP_004522738.1	hybrid sensor histidine kinase/response regulator AtsR	48.3	42.0	27.3
MGA_1567	LOCUS_14990	sequence088:8916..9308(+)	partial			WP_050863361.1	lytic transglycosylase domain-containing protein	94.6	68.7	42.3
MGA_1572	LOCUS_15040	sequence089:2741..4678(+)	partial			WP_004555884.1	DNA polymerase III subunit gamma/tau	85.1	64.7	54.6
MGA_1588	LOCUS_15180	sequence090:8394..8936(+)	partial			WP_009889020.1	barstar family protein	75.6	72.2	64.0
MGA_1598	LOCUS_15270	sequence091:8250..8741(+)	partial			WP_004530902.1	rRNA maturation RNase YbeY	96.9	55.9	50.3
MGA_1607	LOCUS_15350	sequence092:9015..9455(-)	partial			WP_070071251.1	efflux transporter outer membrane subunit	92.5	26.3	47.4
MGA_1614	LOCUS_15420	sequence093:6456..8222(-)	partial			WP_011109041.1	C2 family cysteine protease	32.8	38.2	26.0
MGA_1616	LOCUS_15440	sequence094:628..7863(+)	partial			WP_010929995.1	bifunctional adenylate cyclase toxin/hemolysin CyaA	5.7	8.3	32.7
MGA_1619	LOCUS_15470	sequence095:510..1550(+)	partial			WP_011266879.1	harpin HrpZ family protein	46.5	48.1	29.7
MGA_1620	LOCUS_15480	sequence095:1607..2449(-)	partial			WP_014207442.1	lytic transglycosylase domain-containing protein	50.0	54.5	46.4
MGA_1630	LOCUS_15580	sequence096:665..1078(-)	partial			WP_010969050.1	GFA family protein	88.3	74.2	35.2
MGA_1647	LOCUS_15730	sequence098:2385..3260(-)	partial			WP_004522683.1	AzlC family ABC transporter permease	73.5	84.7	41.6
MGA_1657	LOCUS_15820	sequence099:3503..5134(-)	partial			WP_003103572.1	protein-disulfide reductase DsbD	68.0	57.6	38.8
MGA_1672	LOCUS_15940	sequence101:3835..4464(-)	partial			WP_015064052.1	type II secretion system F family protein	67.5	47.3	39.0
MGA_1673	LOCUS_15950	sequence101:4488..5159(-)	partial			WP_136348290.1	type II secretion system F family protein	97.8	74.8	37.2
MGA_1674	LOCUS_15960	sequence101:5149..6357(-)	partial			WP_015064053.1	ATPase, T2SS/T4P/T4SS family	76.6	57.2	55.8
MGA_1683	LOCUS_16050	sequence102:7860..8264(+)	partial			WP_019213468.1	IS6 family transposase	96.3	55.8	63.6
MGA_1685	LOCUS_16070	sequence103:1389..1841(-)	partial			WP_000779367.1	MepB family protein	81.3	70.2	50.8
MGA_1692	LOCUS_16140	sequence103:6748..7419(+)	partial			WP_050754218.1	DDE-type integrase/transposase/recombinase	69.1	39.3	31.2
MGA_1704	LOCUS_16240	sequence105:955..2214(+)	partial			WP_010920280.1	type IV secretion system protein VirB10	56.1	59.5	33.1
MGA_1706	LOCUS_16260	sequence105:3247..3798(+)	partial			WP_011037614.1	lytic transglycosylase domain-containing protein	67.8	42.6	47.2
MGA_1707	LOCUS_16270	sequence105:3795..4349(+)	partial			WP_092586231.1	hypothetical protein	32.1	34.1	44.1
MGA_1711	LOCUS_16310	sequence105:6414..7895(+)	partial			WP_011704365.1	pilus (MSHA type) biogenesis protein MshL	61.9	58.7	25.3
MGA_1726	LOCUS_16420	sequence108:150..596(+)	partial			WP_005462744.1	fructose-6-phosphate aldolase	87.8	58.9	37.6
MGA_1732	LOCUS_16480	sequence108:4009..6393(+)	partial			WP_011104542.1	VapE family protein	51.4	54.0	42.5
MGA_1737	LOCUS_16520	sequence109:2882..3100(+)	frameshift		3094	WP_004521366.1	MBL fold metallo-hydrolase	93.1	22.8	52.2
MGA_1738	LOCUS_16530	sequence109:3438..3806(+)	partial			WP_003807247.1	MBL fold metallo-hydrolase	98.4	42.9	50.8
MGA_1747	LOCUS_16600	sequence110:4958..5314(+)	partial			WP_004185627.1	preprotein translocase subunit SecG	75.4	71.2	57.3
MGA_1759	LOCUS_16700	sequence111:7257..7616(-)	partial			WP_003814571.1	D-alanine--D-alanine ligase	92.4	34.5	55.5
MGA_1761	LOCUS_16720	sequence112:939..2060(+)	internal_stop_codon	759..761(+)		WP_000936809.1	T3SS effector E3 ubiquitin-protein ligase IpaH9.8	96.8	61.5	34.3
MGA_1776	LOCUS_16860	sequence113:2134..3816(-)	partial			WP_011072683.1	DEAD/DEAH box helicase	68.8	66.1	35.1
MGA_1777	LOCUS_16870	sequence113:3803..4429(-)	partial			WP_011027898.1	endonuclease VII domain-containing protein	42.8	43.1	38.2
MGA_1792	LOCUS_17000	sequence115:1400..2467(-)	partial			WP_013224375.1	SWIM zinc finger family protein	43.1	40.4	37.8
MGA_1793	LOCUS_17010	sequence115:2493..5246(-)	partial			WP_010950658.1	DEAD/DEAH box helicase	66.8	59.7	43.4
MGA_1809	LOCUS_17150	sequence118:141..6821(-)	partial			WP_013844483.1	calcium-binding protein	10.4	67.2	28.7
MGA_1828	LOCUS_17330	sequence121:4807..6048(-)	frameshift		6050	WP_004521708.1	CHASE2 domain-containing protein	98.8	53.2	38.5
MGA_1829	LOCUS_17340	sequence121:6015..6761(-)	frameshift		6044	WP_010925685.1	CHASE2 domain-containing protein	93.5	27.5	32.3
MGA_1834	LOCUS_17390	sequence123:92..1195(-)	partial			WP_002218844.1	DASS family sodium-coupled anion symporter	96.7	73.0	55.9
MGA_1844	LOCUS_17460	sequence125:484..1722(+)	partial			WP_010957349.1	TolC family outer membrane protein	89.3	67.4	23.8
MGA_1860	LOCUS_17580	sequence127:972..2048(+)	partial			WP_011948595.1	tetratricopeptide repeat protein	24.9	15.7	33.7
MGA_1865	LOCUS_17630	sequence128:177..1142(+)	partial			WP_004549921.1	type VI secretion system ATPase TssH	91.0	32.5	43.0
MGA_1870	LOCUS_17680	sequence128:5385..5918(-)	partial			WP_004406534.1	type III secretion system export apparatus subunit SctR	92.1	73.7	50.9
MGA_1882	LOCUS_17780	sequence130:5166..>5863(-)	partial			WP_004192006.1	ABC transporter ATP-binding protein	89.2	73.9	38.9
MGA_1896	LOCUS_17910	sequence132:4705..4971(-)	frameshift		4991	WP_024265848.1	alpha/beta fold hydrolase	100.0	38.3	40.9
MGA_1897	LOCUS_17920	sequence132:4929..5396(-)	frameshift		4988	WP_014206998.1	alpha/beta hydrolase	78.7	52.4	29.5
MGA_1898	LOCUS_17930	sequence133:119..1141(-)	partial			WP_010927472.1	efflux transporter outer membrane subunit	98.5	69.0	32.2
MGA_1899	LOCUS_17940	sequence133:1281..1724(-)	partial			WP_015705570.1	DUF3313 domain-containing protein	71.4	46.8	41.0
MGA_1902	LOCUS_17970	sequence133:5089..5616(+)	partial			WP_004189150.1	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	84.6	31.4	42.9
MGA_1905	LOCUS_18000	sequence134:1564..2286(-)	partial			WP_010971285.1	HK97 family phage prohead protease	55.8	68.9	42.3
MGA_1926	LOCUS_18170	sequence138:36..416(+)	partial			WP_002368685.1	D-Ala-D-Ala dipeptidase VanX	64.3	36.6	38.3
MGA_1928	LOCUS_18190	sequence138:1504..2562(+)	partial			WP_013095791.1	MASE1 domain-containing protein	65.3	42.9	30.2
MGA_1931	LOCUS_18220	sequence138:4483..4713(+)	partial			WP_013095672.1	YaeQ family protein	89.5	37.6	35.3
MGA_1942	LOCUS_18320	sequence140:3861..5168(-)	partial			WP_015039005.1	BB0821 family autotransporter	100.0	44.8	30.0
MGA_1945	LOCUS_18340	sequence142:207..842(+)	partial			WP_076057213.1	4'-phosphopantetheinyl transferase superfamily protein	49.3	53.9	30.0
MGA_1960	LOCUS_18460	sequence144:526..951(-)	partial			WP_000904930.1	recombinase family protein	63.8	48.4	37.8
MGA_1962	LOCUS_18480	sequence144:4142..4381(-)	partial			WP_011035306.1	saccharopine dehydrogenase NADP-binding domain-containing protein	69.6	14.6	52.7
MGA_1967	LOCUS_18520	sequence145:2404..3891(+)	partial			WP_011073811.1	GspE/PulE family protein	83.8	68.6	31.8
MGA_1976	LOCUS_18580	sequence147:489..965(-)	partial			WP_011269111.1	phage GP46 family protein	63.3	75.8	58.0
MGA_1991	LOCUS_18710	sequence149:3931..>4614(-)	partial			WP_054186288.1	DUF1173 domain-containing protein	91.2	52.3	39.5
MGA_1993	LOCUS_18730	sequence150:1027..1398(-)	internal_stop_codon	1423..1425(-)		WP_003115017.1	class I SAM-dependent methyltransferase	95.9	46.6	55.9
MGA_1994	LOCUS_18740	sequence150:1423..1797(-)	internal_stop_codon	1423..1425(-)		WP_013095685.1	class I SAM-dependent methyltransferase	100.0	48.2	50.8
MGA_1996	LOCUS_18760	sequence151:1..592(+)	partial			WP_011337911.1	HK97 family phage prohead protease	62.2	64.9	38.5
MGA_2010	LOCUS_18880	sequence153:2641..>4472(-)	partial			WP_010968308.1	double-strand break repair helicase AddA	58.9	28.4	29.8
MGA_2025	LOCUS_19000	sequence156:2826..2993(-)	frameshift,internal_stop_codon	3023..3025(-)	3166	WP_040233361.1	phage portal protein	96.4	15.3	62.3
MGA_2026	LOCUS_19010	sequence156:3092..3364(-)	frameshift,internal_stop_codon	3023..3025(-),3434..3436(-)	3166	WP_004199886.1	phage portal protein	76.7	19.7	71.0
MGA_2027	LOCUS_19020	sequence156:3715..>4292(-)	partial			WP_004191586.1	enoyl-ACP reductase FabI	99.0	71.9	76.2
MGA_2029	LOCUS_19040	sequence157:1322..1705(+)	partial			WP_014626149.1	thioesterase family protein	97.6	68.1	30.4
MGA_2033	LOCUS_19070	sequence158:70..1491(-)	partial			WP_011266893.1	type III secretion system export apparatus subunit SctV	91.8	63.0	52.1
MGA_2037	LOCUS_19110	sequence158:2755..>4207(-)	partial			WP_004529393.1	carbon starvation CstA family protein	98.6	68.8	71.4
MGA_2041	LOCUS_19140	sequence160:136..771(+)	partial			WP_011707571.1	A24 family peptidase	80.1	59.0	35.7
MGA_2047	LOCUS_19180	sequence161:1641..3950(+)	partial			WP_003115056.1	type VI secretion system ATPase TssH	43.2	35.0	38.2
MGA_2050	LOCUS_19200	sequence162:875..1309(-)	internal_stop_codon	1322..1324(-)		WP_011101946.1	SDR family oxidoreductase	98.6	49.8	60.6
MGA_2051	LOCUS_19210	sequence162:1322..1708(-)	internal_stop_codon	1322..1324(-)		WP_011101946.1	SDR family oxidoreductase	96.9	43.5	50.8
MGA_2053	LOCUS_19230	sequence162:3193..>4016(-)	partial			WP_024696519.1	calcium-binding protein	94.5	39.9	33.3
MGA_2055	LOCUS_19240	sequence163:263..1975(-)	partial			WP_004192408.1	DEAD/DEAH box helicase	70.2	78.1	60.2
MGA_2068	LOCUS_19330	sequence166:596..748(-)	partial			WP_004550904.1	cytochrome bd-I oxidase subunit CydX	50.0	78.1	84.0
MGA_2080	LOCUS_19410	sequence169:415..2352(-)	partial			WP_005763446.1	GspE/PulE family protein	73.8	80.5	29.3
MGA_2083	LOCUS_19430	sequence170:1..1271(+)	partial			WP_004185348.1	isoleucine--tRNA ligase	99.8	43.7	64.7
MGA_2131	LOCUS_19800	sequence181:1..720(+)	partial			WP_000589001.1	ISNCY family transposase	96.7	51.6	31.4
MGA_2167	LOCUS_20030	sequence191:2218..2895(-)	partial			WP_004191984.1	lipoprotein-releasing ABC transporter permease subunit	100.0	54.0	60.0
MGA_2172	LOCUS_20050	sequence193:1760..>2866(-)	partial			WP_004196461.1	ATP-dependent Clp protease ATP-binding subunit ClpA	100.0	48.2	78.3
MGA_2173	LOCUS_20060	sequence194:1..843(+)	partial			WP_011037397.1	MFS transporter	98.2	66.1	44.7