{ "tc_result": [ { "organism_name": "Sphingomonas echinoides", "strain": "strain=ATCC 14820", "accession": "GCA_000241465.1", "taxid": 59803, "species_taxid": 59803, "relation_to_type": "type", "validated": true, "ani": 79.1177, "matched_fragments": 409, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas alpina", "strain": "strain=DSM 22537", "accession": "GCA_025370095.1", "taxid": 653931, "species_taxid": 653931, "relation_to_type": "type", "validated": true, "ani": 78.8688, "matched_fragments": 399, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas alpina", "strain": "strain=DSM 22537", "accession": "GCA_014490665.1", "taxid": 653931, "species_taxid": 653931, "relation_to_type": "type", "validated": true, "ani": 78.8552, "matched_fragments": 402, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas 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"GCA_001717955.1", "taxid": 1560345, "species_taxid": 1560345, "relation_to_type": "type", "validated": true, "ani": 78.4127, "matched_fragments": 355, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas hengshuiensis", "strain": "strain=WHSC-8", "accession": "GCA_000935025.1", "taxid": 1609977, "species_taxid": 1609977, "relation_to_type": "type", "validated": true, "ani": 78.2882, "matched_fragments": 364, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas taxi", "strain": "strain=ATCC 55669", "accession": "GCA_000764535.1", "taxid": 1549858, "species_taxid": 1549858, "relation_to_type": "type", "validated": true, "ani": 78.1899, "matched_fragments": 313, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas naasensis", "strain": "strain=DSM 100060", "accession": "GCA_011762145.1", "taxid": 1344951, "species_taxid": 1344951, "relation_to_type": "type", "validated": true, "ani": 78.157, "matched_fragments": 322, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas insulae", "strain": "strain=KCTC 12872", "accession": "GCA_010450875.1", "taxid": 424800, "species_taxid": 424800, "relation_to_type": "type", "validated": true, "ani": 78.1466, "matched_fragments": 291, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas naasensis", "strain": "strain=KIS18-15", "accession": "GCA_004792695.1", "taxid": 1344951, "species_taxid": 1344951, "relation_to_type": "type", "validated": true, "ani": 78.1419, "matched_fragments": 320, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas insulae", "strain": "strain=DSM 21792", "accession": "GCA_011762035.1", "taxid": 424800, "species_taxid": 424800, "relation_to_type": "type", "validated": true, "ani": 78.1065, "matched_fragments": 290, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas suaedae", "strain": "strain=XS-10", "accession": "GCA_007833215.1", "taxid": 2599297, "species_taxid": 2599297, "relation_to_type": "type", "validated": true, "ani": 77.9493, "matched_fragments": 295, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas kyeonggiensis", "strain": "strain=DSM 101806", "accession": "GCA_014196745.1", "taxid": 1268553, "species_taxid": 1268553, "relation_to_type": "type", "validated": true, "ani": 77.9335, "matched_fragments": 301, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas pituitosa", "strain": "strain=NBRC 102491", "accession": "GCA_001598435.1", "taxid": 99597, "species_taxid": 99597, "relation_to_type": "type", "validated": true, "ani": 77.915, "matched_fragments": 293, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas jeddahensis", "strain": "strain=G39", "accession": "GCA_001981525.1", "taxid": 1915074, "species_taxid": 1915074, "relation_to_type": "type", "validated": true, "ani": 77.8473, "matched_fragments": 242, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas dokdonensis", "strain": "strain=DSM 21029", "accession": "GCA_002197685.1", "taxid": 344880, "species_taxid": 344880, "relation_to_type": "type", "validated": true, "ani": 77.7937, "matched_fragments": 248, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium algorifonticola", "strain": "strain=TLA-22", "accession": "GCA_004005485.1", "taxid": 2008318, "species_taxid": 2008318, "relation_to_type": "type", "validated": true, "ani": 77.7513, "matched_fragments": 221, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas citri", "strain": "strain=RRHST34", "accession": "GCA_019429485.1", "taxid": 2862499, "species_taxid": 2862499, "relation_to_type": "type", "validated": true, "ani": 77.6905, "matched_fragments": 266, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas radiodurans", "strain": "strain=S9-5", "accession": "GCA_020866845.1", "taxid": 2890321, "species_taxid": 2890321, "relation_to_type": "type", "validated": true, "ani": 77.6713, "matched_fragments": 282, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas folli", "strain": "strain=RHCKR7", "accession": "GCA_019429525.1", "taxid": 2862497, "species_taxid": 2862497, "relation_to_type": "type", "validated": true, "ani": 77.6296, "matched_fragments": 257, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas cavernae", "strain": "strain=K2R01-6", "accession": "GCA_003590775.1", "taxid": 2320861, "species_taxid": 2320861, "relation_to_type": "type", "validated": true, "ani": 77.5665, "matched_fragments": 258, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas aracearum", "strain": "strain=WZY 27", "accession": "GCA_003345355.1", "taxid": 2283317, "species_taxid": 2283317, "relation_to_type": "type", "validated": true, "ani": 77.4955, "matched_fragments": 284, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas oligoaromativorans", "strain": "strain=DSM 102246", "accession": "GCA_011762195.1", "taxid": 575322, "species_taxid": 575322, "relation_to_type": "type", "validated": true, "ani": 77.4093, "matched_fragments": 213, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas yunnanensis", "strain": "strain=YIM 3", "accession": "GCA_019898765.1", "taxid": 310400, "species_taxid": 310400, "relation_to_type": "type", "validated": true, "ani": 77.3768, "matched_fragments": 262, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium cupriresistens", "strain": "strain=CCTCC AB 2011146", "accession": "GCA_004152865.1", "taxid": 1132417, "species_taxid": 1132417, "relation_to_type": "type", "validated": true, "ani": 77.3744, "matched_fragments": 242, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas aerophila", "strain": "strain=DSM 100044", "accession": "GCA_014199305.1", "taxid": 1344948, "species_taxid": 1344948, "relation_to_type": "type", "validated": true, "ani": 77.2412, "matched_fragments": 193, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas prati", "strain": "strain=DSM 103336", "accession": "GCA_014199405.1", "taxid": 1843237, "species_taxid": 1843237, "relation_to_type": "type", "validated": true, "ani": 77.2239, "matched_fragments": 190, "total_fragments": 1012, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 83.8, "contamination": 4.17, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCA_001464615.1", "gtdb_species": "s__Sphingomonas sp001464615", "ani": 94.9876, "matched_fragments": 837, "total_fragments": 1012, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.17", "min_intra_species_ani": "95.17", "mean_intra_species_af": "0.82", "min_intra_species_af": "0.82", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_002281535.1", "gtdb_species": "s__Sphingomonas sp002281535", "ani": 82.531, "matched_fragments": 643, "total_fragments": 1012, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.51", "min_intra_species_ani": "96.51", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.87", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_002863155.1", "gtdb_species": "s__Sphingomonas sp002863155", "ani": 79.6433, "matched_fragments": 441, "total_fragments": 1012, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903884945.1", "gtdb_species": "s__Sphingomonas sp903884945", "ani": 78.5488, "matched_fragments": 366, "total_fragments": 1012, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.55", "min_intra_species_ani": "97.55", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_013344685.1", "gtdb_species": "s__Sphingomonas sp013344685", "ani": 78.1272, "matched_fragments": 320, "total_fragments": 1012, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001981525.1", "gtdb_species": "s__Sphingomonas jeddahensis", "ani": 77.847, "matched_fragments": 242, "total_fragments": 1012, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002197685.1", "gtdb_species": "s__Sphingomonas dokdonensis", "ani": 77.8168, "matched_fragments": 247, "total_fragments": 1012, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900109205.1", "gtdb_species": "s__Sphingomonas sp900109205", "ani": 77.6465, "matched_fragments": 249, "total_fragments": 1012, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.55", "min_intra_species_ani": "97.55", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.87", "num_clustered_genomes": 2, "status": "-" } ] }