{ "type": "genome", "identifier": "GCA_021737685.1", "organism": "Desulfotignum sp.", "title": "Desulfotignum sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Evolutionary Genomics Group", "publication": [ {} ], "properties": { "assembly_accession": "GCA_021737685.1", "bioproject": "PRJNA639779", "biosample": "SAMN21020429", "wgs_master": "JAIPDK000000000.1", "refseq_category": "na", "taxid": "2049434", "species_taxid": "2049434", "organism_name": "Desulfotignum sp.", "infraspecific_name": "", "isolate": "Tobar13.5m-G21", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/01/31", "asm_name": "ASM2173768v1", "submitter": "Evolutionary Genomics Group", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/021/737/685/GCA_021737685.1_ASM2173768v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-01-31", "dateModified": "2022-01-31", "datePublished": "2022-01-31", "_annotation": { "sample_count": 1, "sample_organism": [ "Desulfotignum sp." ], "sample_taxid": [ "2049434" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Spain: Laguna del Tobar" ], "sample_host_location_id": [], "data_size": "0.669 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 91.29, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2383978", "Number of Sequences": "169", "Longest Sequences (bp)": "48020", "N50 (bp)": "15851", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "50.9", "Number of CDSs": "2084", "Average Protein Length": "323.6", "Coding Ratio (%)": "84.9", "Number of rRNAs": "1", "Number of tRNAs": "38", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Desulfotignum balticum", "strain": "strain=DSM 7044", "accession": "GCA_000421285.1", "taxid": 115781, "species_taxid": 115781, "relation_to_type": "type", "validated": true, "ani": 81.8953, "matched_fragments": 514, "total_fragments": 721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfotignum phosphitoxidans", "strain": "strain=DSM 13687", "accession": "GCA_000350545.1", "taxid": 190898, "species_taxid": 190898, "relation_to_type": "type", "validated": true, "ani": 81.734, "matched_fragments": 517, "total_fragments": 721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfospira joergensenii", "strain": "strain=DSM 10085", "accession": "GCA_000420085.1", "taxid": 53329, 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