{
    "type": "genome",
    "identifier": "GCA_021740085.1",
    "organism": "Crocinitomicaceae bacterium",
    "title": "Crocinitomicaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Evolutionary Genomics Group",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_021740085.1",
        "bioproject": "PRJNA639779",
        "biosample": "SAMN21020253",
        "wgs_master": "JAIPAL000000000.1",
        "refseq_category": "na",
        "taxid": "2026728",
        "species_taxid": "2026728",
        "organism_name": "Crocinitomicaceae bacterium",
        "infraspecific_name": "",
        "isolate": "Tobar2m-G15",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/01/31",
        "asm_name": "ASM2174008v1",
        "submitter": "Evolutionary Genomics Group",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/021/740/085/GCA_021740085.1_ASM2174008v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-01-31",
    "dateModified": "2022-01-31",
    "datePublished": "2022-01-31",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Crocinitomicaceae bacterium"
        ],
        "sample_taxid": [
            "2026728"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Spain: Laguna del Tobar"
        ],
        "sample_host_location_id": [],
        "data_size": "0.687 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2414403",
        "Number of Sequences": "101",
        "Longest Sequences (bp)": "313980",
        "N50 (bp)": "37619",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "36.4",
        "Number of CDSs": "1966",
        "Average Protein Length": "359.0",
        "Coding Ratio (%)": "87.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "27",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_903939755.1",
                "gtdb_species": "s__UBA952 sp903939755",
                "ani": 89.0037,
                "matched_fragments": 654,
                "total_fragments": 755,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__UBA952",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.13",
                "min_intra_species_ani": "98.32",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_009923965.1",
                "gtdb_species": "s__UBA952 sp009923965",
                "ani": 79.4445,
                "matched_fragments": 51,
                "total_fragments": 755,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__UBA952",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903935095.1",
                "gtdb_species": "s__UBA952 sp903935095",
                "ani": 76.9339,
                "matched_fragments": 58,
                "total_fragments": 755,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__UBA952",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.97",
                "min_intra_species_ani": "99.95",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_018883325.1",
                "gtdb_species": "s__UBA952 sp018883325",
                "ani": 76.3508,
                "matched_fragments": 67,
                "total_fragments": 755,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__UBA952",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017984635.1",
                "gtdb_species": "s__M0103 sp017984635",
                "ani": 76.0878,
                "matched_fragments": 64,
                "total_fragments": 755,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__M0103",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.41,
        "cell_length": 0.478,
        "doubling_h": null,
        "growth_tmp": 21.666,
        "optimum_tmp": 28.9,
        "optimum_ph": 7.366,
        "genome_size": 4274511.2,
        "gc_content": 36.495,
        "coding_genes": 4019.333,
        "rRNA16S_genes": 2.0,
        "tRNA_genes": 40.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.8,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Crocinitomicaceae",
        "g__UBA952",
        "s__UBA952 sp021740085"
    ],
    "_genome_taxon": [
        "Crocinitomicaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Crocinitomicaceae",
        "g__UBA952",
        "s__UBA952 sp021740085",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Flavobacteriales",
        "Crocinitomicaceae",
        "UBA952",
        "UBA952",
        "sp021740085"
    ],
    "_meo": [
        {
            "id": "MEO_0000737",
            "label": "lake water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}