{ "type": "genome", "identifier": "GCA_021815005.1", "organism": "Chloroflexota bacterium", "title": "Chloroflexota bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Sun Yat-sen University, Guangzhou", "publication": [ {} ], "properties": { "assembly_accession": "GCA_021815005.1", "bioproject": "PRJNA666025", "biosample": "SAMN20844286", "wgs_master": "JAKAHL000000000.1", "refseq_category": "na", "taxid": "2026724", "species_taxid": "2026724", "organism_name": "Chloroflexota bacterium", "infraspecific_name": "", "isolate": "WY3.bin108", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/02/01", "asm_name": "ASM2181500v1", "submitter": "Sun Yat-sen University, Guangzhou", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/021/815/005/GCA_021815005.1_ASM2181500v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-02-01", "dateModified": "2022-02-01", "datePublished": "2022-02-01", "_annotation": { "sample_count": 1, "sample_organism": [ "Chloroflexota bacterium" ], "sample_taxid": [ "2026724" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Wuyi Polymetallic Mine, Guangxi Province" ], "sample_host_location_id": [], "data_size": "0.552 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 79.17, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2053035", "Number of Sequences": "317", "Longest Sequences (bp)": "23067", "N50 (bp)": "7671", "Gap Ratio (%)": "0.000487", "GCcontent (%)": "73.7", "Number of CDSs": "1660", "Average Protein Length": "309.2", "Coding Ratio (%)": "75.0", "Number of rRNAs": "0", "Number of tRNAs": "28", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Mangrovactinospora gilvigriseus", "strain": "strain=MUSC 26", "accession": "GCA_001879105.1", "taxid": 1428644, "species_taxid": 1428644, "relation_to_type": "type", "validated": true, "ani": 75.2086, "matched_fragments": 90, "total_fragments": 536, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptoalloteichus tenebrarius", "strain": "strain=DSM 40477", "accession": "GCA_024171885.1", "taxid": 1933, "species_taxid": 1933, "relation_to_type": "type", "validated": true, "ani": 75.1405, "matched_fragments": 105, "total_fragments": 536, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura viridis", "strain": "strain=DSM 43175", "accession": "GCA_015751755.1", "taxid": 58110, "species_taxid": 58110, "relation_to_type": "type", "validated": true, "ani": 75.0245, "matched_fragments": 123, "total_fragments": 536, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saccharothrix obliqua", "strain": "strain=SC076", "accession": "GCA_019375475.1", "taxid": 2861747, "species_taxid": 2861747, "relation_to_type": "type", "validated": true, "ani": 75.0226, "matched_fragments": 106, "total_fragments": 536, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulosimicrobium funkei", "strain": "strain=NBRC 104118", "accession": "GCA_001570825.1", "taxid": 264251, "species_taxid": 264251, "relation_to_type": "suspected-type", "validated": true, "ani": 74.9919, "matched_fragments": 101, "total_fragments": 536, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulosimicrobium funkei", "strain": "strain=JCM 14302", "accession": "GCA_004519295.1", "taxid": 264251, "species_taxid": 264251, "relation_to_type": "suspected-type", "validated": true, "ani": 74.9454, "matched_fragments": 105, "total_fragments": 536, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura rudentiformis", "strain": "strain=HMC1", "accession": "GCA_008923185.1", "taxid": 359158, "species_taxid": 359158, "relation_to_type": "type", "validated": true, "ani": 74.9105, "matched_fragments": 121, "total_fragments": 536, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas abaci", "strain": "strain=DSM 15867", "accession": "GCA_014199625.1", "taxid": 237611, "species_taxid": 237611, "relation_to_type": "type", "validated": true, "ani": 74.8336, "matched_fragments": 54, "total_fragments": 536, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halosimplex pelagicum", "strain": "strain=R2", "accession": "GCA_013415905.1", 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