{
    "type": "genome",
    "identifier": "GCA_022241465.1",
    "organism": "Blastomonas sp.",
    "title": "Blastomonas sp.",
    "description": "derived from metagenome; fragmented assembly",
    "data type": "Genome sequencing and assembly",
    "organization": "Universidad de Antofagasta",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022241465.1",
        "bioproject": "PRJNA804195",
        "biosample": "SAMN25755440",
        "wgs_master": "JAKOMR000000000.1",
        "refseq_category": "na",
        "taxid": "1909299",
        "species_taxid": "1909299",
        "organism_name": "Blastomonas sp.",
        "infraspecific_name": "",
        "isolate": "LLA-3",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/02/15",
        "asm_name": "ASM2224146v1",
        "submitter": "Universidad de Antofagasta",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/241/465/GCA_022241465.1_ASM2224146v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-02-15",
    "dateModified": "2022-02-15",
    "datePublished": "2022-02-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Blastomonas sp."
        ],
        "sample_taxid": [
            "1909299"
        ],
        "sample_host_organism": [
            "Nostoc sp."
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Chile: Visviri, Atacama Desert"
        ],
        "sample_host_location_id": [],
        "data_size": "0.525 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 44.44,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1863535",
        "Number of Sequences": "522",
        "Longest Sequences (bp)": "8238",
        "N50 (bp)": "4809",
        "Gap Ratio (%)": "0.000859",
        "GCcontent (%)": "64.2",
        "Number of CDSs": "1358",
        "Average Protein Length": "277.8",
        "Coding Ratio (%)": "60.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "20",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Blastomonas fulva",
                "strain": "strain=T2",
                "accession": "GCA_003431825.1",
                "taxid": 1550728,
                "species_taxid": 1550728,
                "relation_to_type": "type",
                "validated": true,
                "ani": 87.3699,
                "matched_fragments": 317,
                "total_fragments": 362,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Blastomonas aquatica",
                "strain": "strain=CGMCC 1.12851",
                "accession": "GCA_014639875.1",
                "taxid": 1510276,
                "species_taxid": 1510276,
                "relation_to_type": "type",
                "validated": true,
                "ani": 85.9163,
                "matched_fragments": 306,
                "total_fragments": 362,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingomonas leidyi",
                "strain": "strain=DSM 4733",
                "accession": "GCA_011761945.1",
                "taxid": 68569,
                "species_taxid": 68569,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0949,
                "matched_fragments": 110,
                "total_fragments": 362,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingomonas trueperi",
                "strain": "strain=DSM 7225",
                "accession": "GCA_011927635.1",
                "taxid": 53317,
                "species_taxid": 53317,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7369,
                "matched_fragments": 134,
                "total_fragments": 362,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhizorhabdus histidinilytica",
                "strain": "strain=UM2",
                "accession": "GCA_900167915.1",
                "taxid": 439228,
                "species_taxid": 439228,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6842,
                "matched_fragments": 121,
                "total_fragments": 362,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 44.44,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_003431825.1",
                "gtdb_species": "s__Blastomonas fulva",
                "ani": 87.3699,
                "matched_fragments": 317,
                "total_fragments": 362,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Blastomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.01",
                "min_intra_species_ani": "97.97",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_014639875.1",
                "gtdb_species": "s__Blastomonas aquatica",
                "ani": 85.9163,
                "matched_fragments": 306,
                "total_fragments": 362,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Blastomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000786215.1",
                "gtdb_species": "s__Blastomonas sp000786215",
                "ani": 85.2965,
                "matched_fragments": 305,
                "total_fragments": 362,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Blastomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000331245.1",
                "gtdb_species": "s__Blastomonas sp000331245",
                "ani": 84.8816,
                "matched_fragments": 308,
                "total_fragments": 362,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Blastomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_000503195.1",
                "gtdb_species": "s__Blastomonas sp000503195",
                "ani": 84.4558,
                "matched_fragments": 299,
                "total_fragments": 362,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Blastomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.00",
                "min_intra_species_ani": "97.00",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 26.5,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": 4084537.5,
        "gc_content": 64.172,
        "coding_genes": 3762.0,
        "rRNA16S_genes": null,
        "tRNA_genes": 46.0,
        "gram_stain": 0.0,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Sphingomonadales",
        "f__Sphingomonadaceae",
        "g__Blastomonas",
        "s__"
    ],
    "_genome_taxon": [
        "Blastomonas",
        "sp.",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Sphingomonadales",
        "f__Sphingomonadaceae",
        "g__Blastomonas",
        "s__",
        "Bacteria",
        "Pseudomonadota",
        "Alphaproteobacteria",
        "Sphingomonadales",
        "Sphingomonadaceae",
        "Blastomonas",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0001054",
            "label": "algal bloom"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}