{
    "type": "genome",
    "identifier": "GCA_022360725.1",
    "organism": "Pirellulales bacterium",
    "title": "Pirellulales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Konstanz",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022360725.1",
        "bioproject": "PRJNA757245",
        "biosample": "SAMN22830480",
        "wgs_master": "JAKSCI000000000.1",
        "refseq_category": "na",
        "taxid": "2715253",
        "species_taxid": "2715253",
        "organism_name": "Pirellulales bacterium",
        "infraspecific_name": "",
        "isolate": "MAG.280",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/02/22",
        "asm_name": "ASM2236072v1",
        "submitter": "University of Konstanz",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/360/725/GCA_022360725.1_ASM2236072v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-02-22",
    "dateModified": "2022-02-22",
    "datePublished": "2022-02-22",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Pirellulales bacterium"
        ],
        "sample_taxid": [
            "2715253"
        ],
        "sample_host_organism": [
            "coral"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Saudi Arabia: Abo Shoosha reef"
        ],
        "sample_host_location_id": [],
        "data_size": "1.149 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 16.67,
        "strain_heterogeneity": 16.67,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3977360",
        "Number of Sequences": "700",
        "Longest Sequences (bp)": "37259",
        "N50 (bp)": "8196",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "56.2",
        "Number of CDSs": "2801",
        "Average Protein Length": "315.8",
        "Coding Ratio (%)": "66.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "46",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Aeoliella mucimassa",
                "strain": "strain=Pan181",
                "accession": "GCA_007748035.1",
                "taxid": 2527972,
                "species_taxid": 2527972,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5146,
                "matched_fragments": 52,
                "total_fragments": 974,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Posidoniimonas polymericola",
                "strain": "strain=Pla123a",
                "accession": "GCA_007859935.1",
                "taxid": 2528002,
                "species_taxid": 2528002,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3852,
                "matched_fragments": 78,
                "total_fragments": 974,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Posidoniimonas corsicana",
                "strain": "strain=KOR34",
                "accession": "GCA_007859765.1",
                "taxid": 1938618,
                "species_taxid": 1938618,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3276,
                "matched_fragments": 82,
                "total_fragments": 974,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lacipirellula limnantheis",
                "strain": "strain=I41",
                "accession": "GCA_007746075.1",
                "taxid": 2528024,
                "species_taxid": 2528024,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2601,
                "matched_fragments": 92,
                "total_fragments": 974,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bythopirellula polymerisocia",
                "strain": "strain=Pla144",
                "accession": "GCA_007860015.1",
                "taxid": 2528003,
                "species_taxid": 2528003,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1335,
                "matched_fragments": 59,
                "total_fragments": 974,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bythopirellula goksoeyrii",
                "strain": "strain=Pr1d",
                "accession": "GCA_008065115.1",
                "taxid": 1400387,
                "species_taxid": 1400387,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1224,
                "matched_fragments": 72,
                "total_fragments": 974,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudobythopirellula maris",
                "strain": "strain=Mal64",
                "accession": "GCA_007859945.1",
                "taxid": 2527991,
                "species_taxid": 2527991,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.065,
                "matched_fragments": 71,
                "total_fragments": 974,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Adhaeretor mobilis",
                "strain": "strain=HG15A2",
                "accession": "GCA_007741515.1",
                "taxid": 1930276,
                "species_taxid": 1930276,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0283,
                "matched_fragments": 60,
                "total_fragments": 974,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pirellulimonas nuda",
                "strain": "strain=Pla175",
                "accession": "GCA_007750855.1",
                "taxid": 2528009,
                "species_taxid": 2528009,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9129,
                "matched_fragments": 68,
                "total_fragments": 974,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lacipirellula parvula",
                "strain": "strain=PX69",
                "accession": "GCA_009177095.1",
                "taxid": 2650471,
                "species_taxid": 2650471,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9106,
                "matched_fragments": 103,
                "total_fragments": 974,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Botrimarina mediterranea",
                "strain": "strain=Spa11",
                "accession": "GCA_007753265.1",
                "taxid": 2528022,
                "species_taxid": 2528022,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7667,
                "matched_fragments": 70,
                "total_fragments": 974,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 16.67,
            "strain_heterogeneity": 16.67
        },
        "gtdb_result": [
            {
                "accession": "GCA_002713555.1",
                "gtdb_species": "s__Bythopirellula sp002713555",
                "ani": 76.7257,
                "matched_fragments": 65,
                "total_fragments": 974,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__Lacipirellulaceae;g__Bythopirellula",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.19",
                "min_intra_species_ani": "98.89",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_007748035.1",
                "gtdb_species": "s__Aeoliella mucimassa",
                "ani": 76.5146,
                "matched_fragments": 52,
                "total_fragments": 974,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__Lacipirellulaceae;g__Aeoliella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013152515.1",
                "gtdb_species": "s__Bythopirellula sp013152515",
                "ani": 76.4211,
                "matched_fragments": 96,
                "total_fragments": 974,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__Lacipirellulaceae;g__Bythopirellula",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_007859765.1",
                "gtdb_species": "s__Posidoniimonas corsicana",
                "ani": 76.3276,
                "matched_fragments": 82,
                "total_fragments": 974,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__Lacipirellulaceae;g__Posidoniimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002702655.1",
                "gtdb_species": "s__GCA-2702655 sp002702655",
                "ani": 76.2995,
                "matched_fragments": 128,
                "total_fragments": 974,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__Lacipirellulaceae;g__GCA-2702655",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_007746075.1",
                "gtdb_species": "s__Lacipirellula limnantheis",
                "ani": 76.2601,
                "matched_fragments": 92,
                "total_fragments": 974,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__Lacipirellulaceae;g__Lacipirellula",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.19",
                "min_intra_species_ani": "97.19",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_013152205.1",
                "gtdb_species": "s__Bythopirellula sp013152205",
                "ani": 76.2106,
                "matched_fragments": 80,
                "total_fragments": 974,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__Lacipirellulaceae;g__Bythopirellula",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_007860015.1",
                "gtdb_species": "s__Bythopirellula polymerisocia",
                "ani": 76.1632,
                "matched_fragments": 58,
                "total_fragments": 974,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__Lacipirellulaceae;g__Bythopirellula",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_007859945.1",
                "gtdb_species": "s__Pseudobythopirellula maris",
                "ani": 76.065,
                "matched_fragments": 71,
                "total_fragments": 974,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__Lacipirellulaceae;g__Pseudobythopirellula",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_007741515.1",
                "gtdb_species": "s__HG15A2 sp007741515",
                "ani": 76.0283,
                "matched_fragments": 60,
                "total_fragments": 974,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__Lacipirellulaceae;g__HG15A2",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003576855.1",
                "gtdb_species": "s__Lacipirellula sp003576855",
                "ani": 76.0021,
                "matched_fragments": 85,
                "total_fragments": 974,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__Lacipirellulaceae;g__Lacipirellula",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009177095.1",
                "gtdb_species": "s__Lacipirellula parvula",
                "ani": 75.9106,
                "matched_fragments": 103,
                "total_fragments": 974,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__Lacipirellulaceae;g__Lacipirellula",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_007753265.1",
                "gtdb_species": "s__Botrimarina mediterranea",
                "ani": 75.7697,
                "matched_fragments": 70,
                "total_fragments": 974,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__Lacipirellulaceae;g__Botrimarina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.49",
                "min_intra_species_ani": "99.49",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_003576845.1",
                "gtdb_species": "s__PLA5 sp003576845",
                "ani": 75.551,
                "matched_fragments": 50,
                "total_fragments": 974,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__PLA5;g__PLA5",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Planctomycetia",
        "o__Pirellulales",
        "f__Lacipirellulaceae",
        "g__Bythopirellula",
        "s__"
    ],
    "_genome_taxon": [
        "Pirellulales",
        "bacterium",
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Planctomycetia",
        "o__Pirellulales",
        "f__Lacipirellulaceae",
        "g__Bythopirellula",
        "s__",
        "Bacteria",
        "Planctomycetota",
        "Planctomycetia",
        "Pirellulales",
        "Lacipirellulaceae",
        "Bythopirellula",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000094",
            "label": "coral reef"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}