{
    "type": "genome",
    "identifier": "GCA_022425385.1",
    "organism": "Candidatus Nanopelagicales bacterium",
    "title": "Candidatus Nanopelagicales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Monash University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022425385.1",
        "bioproject": "PRJNA801081",
        "biosample": "SAMN25339195",
        "wgs_master": "JAKMFQ000000000.1",
        "refseq_category": "na",
        "taxid": "2518612",
        "species_taxid": "2518612",
        "organism_name": "Candidatus Nanopelagicales bacterium",
        "infraspecific_name": "",
        "isolate": "MOX_bin76",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/02/28",
        "asm_name": "ASM2242538v1",
        "submitter": "Monash University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/425/385/GCA_022425385.1_ASM2242538v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-02-28",
    "dateModified": "2022-02-28",
    "datePublished": "2022-02-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidatus Nanopelagicales bacterium"
        ],
        "sample_taxid": [
            "2518612"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Australia: Port Phillip Bay"
        ],
        "sample_host_location_id": [],
        "data_size": "0.489 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 6.44,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1726885",
        "Number of Sequences": "195",
        "Longest Sequences (bp)": "124684",
        "N50 (bp)": "13324",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "62.8",
        "Number of CDSs": "1568",
        "Average Protein Length": "302.7",
        "Coding Ratio (%)": "82.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "30",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Actinomadura harenae",
                "strain": "strain=NEAU-Ht49",
                "accession": "GCA_003696215.1",
                "taxid": 2483351,
                "species_taxid": 2483351,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.5946,
                "matched_fragments": 50,
                "total_fragments": 475,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 6.44,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002729215.1",
                "gtdb_species": "s__S36-B12 sp002729215",
                "ani": 97.6966,
                "matched_fragments": 400,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__S36-B12",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.32",
                "min_intra_species_ani": "97.43",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 12,
                "status": "conclusive"
            },
            {
                "accession": "GCA_012103605.1",
                "gtdb_species": "s__S36-B12 sp012103605",
                "ani": 91.1732,
                "matched_fragments": 389,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__S36-B12",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.57",
                "min_intra_species_ani": "95.57",
                "mean_intra_species_af": "0.76",
                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002728915.1",
                "gtdb_species": "s__S36-B12 sp002728915",
                "ani": 90.4617,
                "matched_fragments": 381,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__S36-B12",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.13",
                "min_intra_species_ani": "98.99",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_010029945.1",
                "gtdb_species": "s__S36-B12 sp010029945",
                "ani": 90.3819,
                "matched_fragments": 338,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__S36-B12",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.25",
                "min_intra_species_ani": "98.18",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.75",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_002694095.1",
                "gtdb_species": "s__S36-B12 sp002694095",
                "ani": 89.7133,
                "matched_fragments": 383,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__S36-B12",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.65",
                "min_intra_species_ani": "97.49",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_018402235.1",
                "gtdb_species": "s__S36-B12 sp018402235",
                "ani": 77.4762,
                "matched_fragments": 137,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__S36-B12",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009699015.1",
                "gtdb_species": "s__WLND01 sp009699015",
                "ani": 75.8315,
                "matched_fragments": 59,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__WLND01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.95",
                "min_intra_species_ani": "98.95",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__S36-B12",
        "f__S36-B12",
        "g__S36-B12",
        "s__S36-B12 sp002729215"
    ],
    "_genome_taxon": [
        "Candidatus",
        "Nanopelagicales",
        "bacterium",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__S36-B12",
        "f__S36-B12",
        "g__S36-B12",
        "s__S36-B12 sp002729215",
        "Bacteria",
        "Actinomycetota",
        "Actinomycetes",
        "S36-B12",
        "S36-B12",
        "S36-B12",
        "S36-B12",
        "sp002729215"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}