{
    "type": "genome",
    "identifier": "GCA_022446795.1",
    "organism": "Phycisphaerales bacterium",
    "title": "Phycisphaerales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "SCOPE",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022446795.1",
        "bioproject": "PRJNA358725",
        "biosample": "SAMN25998952",
        "wgs_master": "JAKVBX000000000.1",
        "refseq_category": "na",
        "taxid": "2052180",
        "species_taxid": "2052180",
        "organism_name": "Phycisphaerales bacterium",
        "infraspecific_name": "",
        "isolate": "ALOHA_ZT_39",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/02",
        "asm_name": "ASM2244679v1",
        "submitter": "SCOPE",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/446/795/GCA_022446795.1_ASM2244679v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-02",
    "dateModified": "2022-03-02",
    "datePublished": "2022-03-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Phycisphaerales bacterium"
        ],
        "sample_taxid": [
            "2052180"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Pacific Ocean: North Pacific Gyre, Station ALOHA"
        ],
        "sample_host_location_id": [],
        "data_size": "0.982 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3543612",
        "Number of Sequences": "78",
        "Longest Sequences (bp)": "556741",
        "N50 (bp)": "150295",
        "Gap Ratio (%)": "0.020064",
        "GCcontent (%)": "63.4",
        "Number of CDSs": "2756",
        "Average Protein Length": "383.2",
        "Coding Ratio (%)": "89.4",
        "Number of rRNAs": "1",
        "Number of tRNAs": "47",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Phycisphaera mikurensis",
                "strain": "strain=DSM 103959",
                "accession": "GCA_014207395.1",
                "taxid": 547188,
                "species_taxid": 547188,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.89,
                "matched_fragments": 51,
                "total_fragments": 1137,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Phycisphaera mikurensis",
                "strain": "strain=NBRC 102666",
                "accession": "GCA_000284115.1",
                "taxid": 547188,
                "species_taxid": 547188,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8591,
                "matched_fragments": 50,
                "total_fragments": 1137,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Algisphaera agarilytica",
                "strain": "strain=DSM 103725",
                "accession": "GCA_014207595.1",
                "taxid": 1385975,
                "species_taxid": 1385975,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.6556,
                "matched_fragments": 51,
                "total_fragments": 1137,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aquisphaera giovannonii",
                "strain": "strain=OJF2",
                "accession": "GCA_008087625.1",
                "taxid": 406548,
                "species_taxid": 406548,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8873,
                "matched_fragments": 69,
                "total_fragments": 1137,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_002702575.1",
                "gtdb_species": "s__UBA1668 sp002702575",
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                "matched_fragments": 278,
                "total_fragments": 1137,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__UBA1668",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.83",
                "min_intra_species_ani": "99.83",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.97",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002716385.1",
                "gtdb_species": "s__UBA1668 sp002716385",
                "ani": 77.2718,
                "matched_fragments": 227,
                "total_fragments": 1137,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__UBA1668",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002717655.1",
                "gtdb_species": "s__UBA1668 sp002717655",
                "ani": 77.2166,
                "matched_fragments": 243,
                "total_fragments": 1137,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__UBA1668",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002295885.1",
                "gtdb_species": "s__UBA854 sp002295885",
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                "matched_fragments": 143,
                "total_fragments": 1137,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__UBA854",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.78",
                "min_intra_species_ani": "99.78",
                "mean_intra_species_af": "0.94",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002364555.1",
                "gtdb_species": "s__UBA1668 sp002364555",
                "ani": 76.8502,
                "matched_fragments": 209,
                "total_fragments": 1137,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__UBA1668",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014238205.1",
                "gtdb_species": "s__SP202 sp014238205",
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                "matched_fragments": 89,
                "total_fragments": 1137,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__SP202",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002591705.1",
                "gtdb_species": "s__UBA854 sp002591705",
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                "matched_fragments": 103,
                "total_fragments": 1137,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__UBA854",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002862305.1",
                "gtdb_species": "s__UBA8087 sp002862305",
                "ani": 76.6698,
                "matched_fragments": 66,
                "total_fragments": 1137,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__UBA8087",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003520025.1",
                "gtdb_species": "s__UBA12567 sp003520025",
                "ani": 76.2216,
                "matched_fragments": 63,
                "total_fragments": 1137,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__UBA12567",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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            },
            {
                "accession": "GCA_015709595.1",
                "gtdb_species": "s__CAADGA01 sp900696425",
                "ani": 76.0184,
                "matched_fragments": 72,
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                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__CAADGA01",
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                "mean_intra_species_ani": "99.08",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_016873275.1",
                "gtdb_species": "s__VGXO01 sp016873275",
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                "matched_fragments": 74,
                "total_fragments": 1137,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__VGXO01",
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_009936695.1",
                "gtdb_species": "s__UBA12014 sp009936695",
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                "matched_fragments": 57,
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                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__UBA12014",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": 25.0,
        "optimum_ph": null,
        "genome_size": 3884381.5,
        "gc_content": 72.147,
        "coding_genes": 3146.0,
        "rRNA16S_genes": 1.0,
        "tRNA_genes": 46.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 1.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
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        "p__Planctomycetota",
        "c__Phycisphaerae",
        "o__Phycisphaerales",
        "f__SM1A02",
        "g__UBA1668",
        "s__UBA1668 sp022446795"
    ],
    "_genome_taxon": [
        "Phycisphaerales",
        "bacterium",
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Phycisphaerae",
        "o__Phycisphaerales",
        "f__SM1A02",
        "g__UBA1668",
        "s__UBA1668 sp022446795",
        "Bacteria",
        "Planctomycetota",
        "Phycisphaerae",
        "Phycisphaerales",
        "SM1A02",
        "UBA1668",
        "UBA1668",
        "sp022446795"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}