{
    "type": "genome",
    "identifier": "GCA_022448085.1",
    "organism": "Pseudomonadales bacterium",
    "title": "Pseudomonadales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "SCOPE",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022448085.1",
        "bioproject": "PRJNA352737",
        "biosample": "SAMN25999140",
        "wgs_master": "JAKUTH000000000.1",
        "refseq_category": "na",
        "taxid": "1891229",
        "species_taxid": "1891229",
        "organism_name": "Pseudomonadales bacterium",
        "infraspecific_name": "",
        "isolate": "ALOHA_A2.5_102",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/02",
        "asm_name": "ASM2244808v1",
        "submitter": "SCOPE",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/448/085/GCA_022448085.1_ASM2244808v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-02",
    "dateModified": "2022-03-02",
    "datePublished": "2022-03-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Pseudomonadales bacterium"
        ],
        "sample_taxid": [
            "1891229"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Pacific Ocean: North Pacific Gyre, Station ALOHA"
        ],
        "sample_host_location_id": [],
        "data_size": "0.768 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 93.75,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2656600",
        "Number of Sequences": "137",
        "Longest Sequences (bp)": "130177",
        "N50 (bp)": "41008",
        "Gap Ratio (%)": "0.000113",
        "GCcontent (%)": "53.4",
        "Number of CDSs": "2340",
        "Average Protein Length": "329.2",
        "Coding Ratio (%)": "87.0",
        "Number of rRNAs": "1",
        "Number of tRNAs": "27",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 93.75,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002313255.1",
                "gtdb_species": "s__UBA11889 sp002313255",
                "ani": 94.8342,
                "matched_fragments": 713,
                "total_fragments": 819,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA11889",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.77",
                "min_intra_species_ani": "98.77",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002719135.1",
                "gtdb_species": "s__UBA11889 sp002719135",
                "ani": 94.6946,
                "matched_fragments": 553,
                "total_fragments": 819,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA11889",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.11",
                "min_intra_species_ani": "97.65",
                "mean_intra_species_af": "0.74",
                "min_intra_species_af": "0.72",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002715785.1",
                "gtdb_species": "s__UBA11889 sp002715785",
                "ani": 84.3283,
                "matched_fragments": 554,
                "total_fragments": 819,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA11889",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.18",
                "min_intra_species_ani": "99.12",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.159,
        "cell_length": 0.181,
        "doubling_h": 0.003,
        "growth_tmp": 28.99,
        "optimum_tmp": 28.439,
        "optimum_ph": 7.223,
        "genome_size": 4973266.217,
        "gc_content": 54.575,
        "coding_genes": 4450.277,
        "rRNA16S_genes": 5.452,
        "tRNA_genes": 67.069,
        "gram_stain": 0.0,
        "sporulation": 0.007,
        "motility": 0.593,
        "range_salinity": 0.666,
        "facultative_respiration": 0.024,
        "anaerobic_respiration": 0.004,
        "aerobic_respiration": 0.971,
        "mesophilic_range_tmp": 0.92,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.079,
        "bacillus_cell_shape": 0.791,
        "coccus_cell_shape": 0.097,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.111,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Pseudomonadales",
        "f__Azotimanducaceae_A",
        "g__UBA11889",
        "s__UBA11889 sp022448085"
    ],
    "_genome_taxon": [
        "Pseudomonadales",
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Pseudomonadales",
        "f__Azotimanducaceae_A",
        "g__UBA11889",
        "s__UBA11889 sp022448085",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Pseudomonadales",
        "Azotimanducaceae",
        "A",
        "UBA11889",
        "UBA11889",
        "sp022448085"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}