{
    "type": "genome",
    "identifier": "GCA_022448185.1",
    "organism": "Vicinamibacterales bacterium",
    "title": "Vicinamibacterales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "SCOPE",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022448185.1",
        "bioproject": "PRJNA352737",
        "biosample": "SAMN25999178",
        "wgs_master": "JAKUUT000000000.1",
        "refseq_category": "na",
        "taxid": "2910147",
        "species_taxid": "2910147",
        "organism_name": "Vicinamibacterales bacterium",
        "infraspecific_name": "",
        "isolate": "ALOHA_A2.5_140",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/02",
        "asm_name": "ASM2244818v1",
        "submitter": "SCOPE",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/448/185/GCA_022448185.1_ASM2244818v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-02",
    "dateModified": "2022-03-02",
    "datePublished": "2022-03-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Vicinamibacterales bacterium"
        ],
        "sample_taxid": [
            "2910147"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Pacific Ocean: North Pacific Gyre, Station ALOHA"
        ],
        "sample_host_location_id": [],
        "data_size": "1.137 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4090686",
        "Number of Sequences": "157",
        "Longest Sequences (bp)": "163607",
        "N50 (bp)": "51509",
        "Gap Ratio (%)": "0.000978",
        "GCcontent (%)": "66.7",
        "Number of CDSs": "3395",
        "Average Protein Length": "343.4",
        "Coding Ratio (%)": "85.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "44",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Luteitalea pratensis",
                "strain": "strain=DSM 100886; HEG_-6_39",
                "accession": "GCA_001618865.1",
                "taxid": 1855912,
                "species_taxid": 1855912,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9473,
                "matched_fragments": 131,
                "total_fragments": 1278,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodoplanes piscinae",
                "strain": "strain=DSM 19946",
                "accession": "GCA_003258855.1",
                "taxid": 444923,
                "species_taxid": 444923,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0512,
                "matched_fragments": 70,
                "total_fragments": 1278,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodoplanes elegans",
                "strain": "strain=DSM 11907",
                "accession": "GCA_003258805.1",
                "taxid": 29408,
                "species_taxid": 29408,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9598,
                "matched_fragments": 87,
                "total_fragments": 1278,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodoplanes roseus",
                "strain": "strain=DSM 5909",
                "accession": "GCA_003258865.1",
                "taxid": 29409,
                "species_taxid": 29409,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9569,
                "matched_fragments": 76,
                "total_fragments": 1278,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaeromyxobacter dehalogenans",
                "strain": "strain=2CP-1",
                "accession": "GCA_000022145.1",
                "taxid": 161493,
                "species_taxid": 161493,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9536,
                "matched_fragments": 104,
                "total_fragments": 1278,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodoplanes elegans",
                "strain": "strain=DSM 11907",
                "accession": "GCA_016653355.1",
                "taxid": 29408,
                "species_taxid": 29408,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9419,
                "matched_fragments": 93,
                "total_fragments": 1278,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kaistia adipata",
                "strain": "strain=DSM 17808",
                "accession": "GCA_000423225.1",
                "taxid": 166954,
                "species_taxid": 166954,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8451,
                "matched_fragments": 75,
                "total_fragments": 1278,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paraburkholderia tuberum",
                "strain": "strain=LMG 21444",
                "accession": "GCA_902833905.1",
                "taxid": 157910,
                "species_taxid": 157910,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7708,
                "matched_fragments": 56,
                "total_fragments": 1278,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nonomuraea typhae",
                "strain": "strain=p1410",
                "accession": "GCA_009760925.1",
                "taxid": 2603600,
                "species_taxid": 2603600,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7229,
                "matched_fragments": 112,
                "total_fragments": 1278,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptosporangium becharense",
                "strain": "strain=DSM 46887",
                "accession": "GCA_014204985.1",
                "taxid": 1816182,
                "species_taxid": 1816182,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7218,
                "matched_fragments": 87,
                "total_fragments": 1278,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptosporangium becharense",
                "strain": "strain=CECT 8961",
                "accession": "GCA_014191075.1",
                "taxid": 1816182,
                "species_taxid": 1816182,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.72,
                "matched_fragments": 87,
                "total_fragments": 1278,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nonomuraea dietziae",
                "strain": "strain=DSM 44320",
                "accession": "GCA_014195505.1",
                "taxid": 65515,
                "species_taxid": 65515,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6708,
                "matched_fragments": 107,
                "total_fragments": 1278,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_015659035.1",
                "gtdb_species": "s__NP936 sp015659035",
                "ani": 98.8198,
                "matched_fragments": 910,
                "total_fragments": 1278,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA8438;g__NP936",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002726085.1",
                "gtdb_species": "s__NP936 sp002726085",
                "ani": 81.2042,
                "matched_fragments": 776,
                "total_fragments": 1278,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA8438;g__NP936",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002712885.1",
                "gtdb_species": "s__UBA8438 sp002712885",
                "ani": 77.8427,
                "matched_fragments": 435,
                "total_fragments": 1278,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA8438;g__UBA8438",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011523845.1",
                "gtdb_species": "s__WTFV01 sp011523845",
                "ani": 77.3503,
                "matched_fragments": 425,
                "total_fragments": 1278,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA8438;g__WTFV01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_012271165.1",
                "gtdb_species": "s__JAAXGX01 sp012271165",
                "ani": 77.0553,
                "matched_fragments": 275,
                "total_fragments": 1278,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA8438;g__JAAXGX01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002346545.1",
                "gtdb_species": "s__UBA2994 sp002346545",
                "ani": 76.9833,
                "matched_fragments": 331,
                "total_fragments": 1278,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA8438;g__UBA2994",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.87",
                "min_intra_species_ani": "99.87",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002328835.1",
                "gtdb_species": "s__UBA2161 sp002328835",
                "ani": 76.6158,
                "matched_fragments": 176,
                "total_fragments": 1278,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA823;g__UBA2161",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.85",
                "min_intra_species_ani": "99.81",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_016865485.1",
                "gtdb_species": "s__Luteitalea sp016865485",
                "ani": 76.1849,
                "matched_fragments": 146,
                "total_fragments": 1278,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__Vicinamibacteraceae;g__Luteitalea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016871255.1",
                "gtdb_species": "s__VFZH01 sp016871255",
                "ani": 76.1661,
                "matched_fragments": 161,
                "total_fragments": 1278,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__VFZH01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003223835.1",
                "gtdb_species": "s__Gp6-AA38 sp003223835",
                "ani": 76.0646,
                "matched_fragments": 119,
                "total_fragments": 1278,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__Gp6-AA38",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.48",
                "min_intra_species_ani": "98.48",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_016184105.1",
                "gtdb_species": "s__JACPDI01 sp016184105",
                "ani": 75.9638,
                "matched_fragments": 131,
                "total_fragments": 1278,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__JACPDI01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003222395.1",
                "gtdb_species": "s__Gp6-AA45 sp003222395",
                "ani": 75.9461,
                "matched_fragments": 155,
                "total_fragments": 1278,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__Gp6-AA45",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.74",
                "min_intra_species_ani": "99.72",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_902826065.1",
                "gtdb_species": "s__CADEFD01 sp902826065",
                "ani": 75.7854,
                "matched_fragments": 155,
                "total_fragments": 1278,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__CADEFD01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013362195.1",
                "gtdb_species": "s__QHWT01 sp013362195",
                "ani": 75.7231,
                "matched_fragments": 115,
                "total_fragments": 1278,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__QHWT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003157675.1",
                "gtdb_species": "s__FEN-299 sp003157675",
                "ani": 75.4433,
                "matched_fragments": 66,
                "total_fragments": 1278,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__Fen-181;g__FEN-299",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Vicinamibacteria",
        "o__Vicinamibacterales",
        "f__UBA8438",
        "g__NP936",
        "s__NP936 sp015659035"
    ],
    "_genome_taxon": [
        "Vicinamibacterales",
        "bacterium",
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Vicinamibacteria",
        "o__Vicinamibacterales",
        "f__UBA8438",
        "g__NP936",
        "s__NP936 sp015659035",
        "Bacteria",
        "Acidobacteriota",
        "Vicinamibacteria",
        "Vicinamibacterales",
        "UBA8438",
        "NP936",
        "NP936",
        "sp015659035"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}