{
    "type": "genome",
    "identifier": "GCA_022448455.1",
    "organism": "Candidatus Thioglobus autotrophicus",
    "title": "Candidatus Thioglobus autotrophicus",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "SCOPE",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022448455.1",
        "bioproject": "PRJNA352737",
        "biosample": "SAMN25999176",
        "wgs_master": "JAKUUR000000000.1",
        "refseq_category": "na",
        "taxid": "1705394",
        "species_taxid": "1705394",
        "organism_name": "Candidatus Thioglobus autotrophicus",
        "infraspecific_name": "",
        "isolate": "ALOHA_A2.5_138",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/02",
        "asm_name": "ASM2244845v1",
        "submitter": "SCOPE",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/448/455/GCA_022448455.1_ASM2244845v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-02",
    "dateModified": "2022-03-02",
    "datePublished": "2022-03-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidatus Thioglobus autotrophicus"
        ],
        "sample_taxid": [
            "1705394"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Pacific Ocean: North Pacific Gyre, Station ALOHA"
        ],
        "sample_host_location_id": [],
        "data_size": "0.490 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1706790",
        "Number of Sequences": "70",
        "Longest Sequences (bp)": "135050",
        "N50 (bp)": "52112",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "39.0",
        "Number of CDSs": "1612",
        "Average Protein Length": "315.7",
        "Coding Ratio (%)": "89.5",
        "Number of rRNAs": "3",
        "Number of tRNAs": "32",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Candidatus Pseudothioglobus singularis",
                "strain": "strain=PS1",
                "accession": "GCA_001281385.1",
                "taxid": 1427364,
                "species_taxid": 1427364,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3521,
                "matched_fragments": 108,
                "total_fragments": 533,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_000213395.2",
                "gtdb_species": "s__Pseudothioglobus sp000213395",
                "ani": 91.1959,
                "matched_fragments": 251,
                "total_fragments": 533,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__PS1;f__Thioglobaceae;g__Pseudothioglobus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_000372785.1",
                "gtdb_species": "s__Pseudothioglobus sp000372785",
                "ani": 90.185,
                "matched_fragments": 304,
                "total_fragments": 533,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__PS1;f__Thioglobaceae;g__Pseudothioglobus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.69",
                "min_intra_species_ani": "95.69",
                "mean_intra_species_af": "0.64",
                "min_intra_species_af": "0.64",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902606745.1",
                "gtdb_species": "s__Pseudothioglobus sp902606745",
                "ani": 89.6717,
                "matched_fragments": 324,
                "total_fragments": 533,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__PS1;f__Thioglobaceae;g__Pseudothioglobus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002698045.1",
                "gtdb_species": "s__Pseudothioglobus sp002698045",
                "ani": 78.6939,
                "matched_fragments": 108,
                "total_fragments": 533,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__PS1;f__Thioglobaceae;g__Pseudothioglobus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.47",
                "min_intra_species_ani": "95.47",
                "mean_intra_species_af": "0.68",
                "min_intra_species_af": "0.68",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_905620445.1",
                "gtdb_species": "s__Pseudothioglobus sp905620445",
                "ani": 77.7358,
                "matched_fragments": 83,
                "total_fragments": 533,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__PS1;f__Thioglobaceae;g__Pseudothioglobus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014384565.1",
                "gtdb_species": "s__Pseudothioglobus aerophilus",
                "ani": 77.5799,
                "matched_fragments": 118,
                "total_fragments": 533,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__PS1;f__Thioglobaceae;g__Pseudothioglobus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.14",
                "min_intra_species_ani": "98.97",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 11,
                "status": "-"
            },
            {
                "accession": "GCF_003326015.1",
                "gtdb_species": "s__Pseudothioglobus singularis_A",
                "ani": 77.5529,
                "matched_fragments": 142,
                "total_fragments": 533,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__PS1;f__Thioglobaceae;g__Pseudothioglobus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001281385.1",
                "gtdb_species": "s__Pseudothioglobus singularis",
                "ani": 77.3255,
                "matched_fragments": 109,
                "total_fragments": 533,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__PS1;f__Thioglobaceae;g__Pseudothioglobus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.68",
                "min_intra_species_ani": "95.87",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.66",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_902509905.1",
                "gtdb_species": "s__Pseudothioglobus sp902509905",
                "ani": 77.2993,
                "matched_fragments": 82,
                "total_fragments": 533,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__PS1;f__Thioglobaceae;g__Pseudothioglobus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.83",
                "min_intra_species_ani": "95.81",
                "mean_intra_species_af": "0.73",
                "min_intra_species_af": "0.73",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__PS1",
        "f__Thioglobaceae",
        "g__Pseudothioglobus",
        "s__Pseudothioglobus autotrophicus_A"
    ],
    "_genome_taxon": [
        "Candidatus",
        "Thioglobus",
        "autotrophicus",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__PS1",
        "f__Thioglobaceae",
        "g__Pseudothioglobus",
        "s__Pseudothioglobus autotrophicus_A",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "PS1",
        "Thioglobaceae",
        "Pseudothioglobus",
        "Pseudothioglobus",
        "autotrophicus",
        "A"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}