{ "type": "genome", "identifier": "GCA_022448985.1", "organism": "Roseibacillus sp.", "title": "Roseibacillus sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "SCOPE", "publication": [ {} ], "properties": { "assembly_accession": "GCA_022448985.1", "bioproject": "PRJNA358725", "biosample": "SAMN25998972", "wgs_master": "JAKVCR000000000.1", "refseq_category": "na", "taxid": "2024856", "species_taxid": "2024856", "organism_name": "Roseibacillus sp.", "infraspecific_name": "", "isolate": "ALOHA_ZT_59", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/03/02", "asm_name": "ASM2244898v1", "submitter": "SCOPE", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/448/985/GCA_022448985.1_ASM2244898v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-03-02", "dateModified": "2022-03-02", "datePublished": "2022-03-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Roseibacillus sp." ], "sample_taxid": [ "2024856" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Pacific Ocean: North Pacific Gyre, Station ALOHA" ], "sample_host_location_id": [], "data_size": "1.313 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "4609624", "Number of Sequences": "290", "Longest Sequences (bp)": "162632", "N50 (bp)": "40756", "Gap Ratio (%)": "0.007940", "GCcontent (%)": "59.5", "Number of CDSs": "3164", "Average Protein Length": "402.4", "Coding Ratio (%)": "82.9", "Number of rRNAs": "1", "Number of tRNAs": "52", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [], "cc_result": { "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCA_014240355.1", "gtdb_species": "s__Roseibacillus_B sp014240355", "ani": 84.891, "matched_fragments": 676, "total_fragments": 1379, "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Verrucomicrobiales;f__Akkermansiaceae;g__Roseibacillus_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003483645.1", "gtdb_species": "s__Roseibacillus_B sp003483645", "ani": 84.1715, "matched_fragments": 570, "total_fragments": 1379, 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"Verrucomicrobiae", "Verrucomicrobiales", "Akkermansiaceae", "Roseibacillus", "B", "Roseibacillus", "B", "sp022448985" ], "_meo": [ { "id": "MEO_0000041", "label": "marine water" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }