# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_20	LOCUS_00190	sequence1:20021..20662(-)	partial			WP_003547312.1	aldo/keto reductase	99.1	73.3	75.4
MGA_21	LOCUS_00200	sequence1:20708..21178(-)	internal_stop_codon	21224..21226(-)		WP_011673973.1	IS30 family transposase	95.5	44.1	67.1
MGA_22	LOCUS_00210	sequence1:21224..21733(-)	internal_stop_codon	21224..21226(-)		WP_011673973.1	IS30 family transposase	95.9	47.0	42.0
MGA_23	LOCUS_00220	sequence1:21792..22103(-)	partial			WP_003547312.1	aldo/keto reductase	81.6	29.2	64.3
MGA_46	LOCUS_00450	sequence1:41394..41729(+)	partial			WP_012804602.1	metalloregulator ArsR/SmtB family transcription factor	83.8	64.1	31.2
MGA_48	LOCUS_00470	sequence1:42432..42584(-)	internal_stop_codon	42597..42599(-)		WP_002364009.1	SDR family oxidoreductase	100.0	18.9	90.0
MGA_49	LOCUS_00480	sequence1:42597..43214(-)	internal_stop_codon	42597..42599(-)		WP_002364009.1	SDR family oxidoreductase	100.0	79.2	77.5
MGA_55	LOCUS_00540	sequence1:47499..48071(-)	partial			WP_011101223.1	helix-turn-helix domain-containing protein	32.6	33.9	43.5
MGA_65	LOCUS_00640	sequence1:56951..57442(-)	frameshift		57455	WP_003643610.1	DHH family phosphoesterase	95.1	23.1	65.2
MGA_66	LOCUS_00650	sequence1:57429..58952(-)	frameshift		57467	WP_003643610.1	DHH family phosphoesterase	97.6	73.6	56.6
MGA_75	LOCUS_00740	sequence1:67928..68791(-)	frameshift		68810	WP_003641628.1	chromosomal replication initiator protein DnaA	99.7	62.9	73.1
MGA_76	LOCUS_00750	sequence1:68757..69269(-)	frameshift		68810	WP_003641628.1	chromosomal replication initiator protein DnaA	88.8	35.2	49.4
MGA_82	LOCUS_00810	sequence1:74982..75518(+)	frameshift		75488	WP_011100877.1	peroxide stress protein YaaA	94.9	68.1	63.3
MGA_83	LOCUS_00820	sequence1:75520..75738(+)	frameshift		75488	WP_011458998.1	peroxide stress protein YaaA	88.9	25.5	46.9
MGA_86	LOCUS_00850	sequence1:77402..77686(+)	frameshift		77683	WP_015381020.1	cardiolipin synthase	79.8	15.8	56.6
MGA_87	LOCUS_00860	sequence1:77667..78866(+)	frameshift		77683	WP_015381020.1	cardiolipin synthase	99.2	81.5	67.0
MGA_89	LOCUS_00880	sequence1:80764..81555(-)	frameshift		80772	WP_011102164.1	SGNH/GDSL hydrolase family protein	97.7	79.3	36.6
MGA_94	LOCUS_00930	sequence1:88005..90974(+)	frameshift		90962	WP_011476466.1	helicase-exonuclease AddAB subunit AddA	98.8	79.7	46.2
MGA_95	LOCUS_00940	sequence1:90958..91713(+)	frameshift,internal_stop_codon	90972..90974(+)	90977	WP_011101882.1	helicase-exonuclease AddAB subunit AddA	93.6	18.4	47.0
MGA_98	LOCUS_00970	sequence1:93292..93486(-)	partial			WP_010905285.1	helix-turn-helix transcriptional regulator	98.4	64.9	63.5
MGA_100	LOCUS_00990	sequence1:94258..94485(-)	partial			WP_003703609.1	DUF454 family protein	77.3	58.8	48.3
MGA_107	LOCUS_01060	sequence1:100839..101288(+)	internal_stop_codon	101286..101288(+)		WP_004398763.1	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	96.6	40.2	46.9
MGA_108	LOCUS_01070	sequence1:101307..101900(+)	internal_stop_codon	101286..101288(+)		WP_005167588.1	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	98.5	56.9	32.6
MGA_115	LOCUS_01140	sequence1:107545..107913(+)	frameshift		107877	WP_002286325.1	ABC transporter ATP-binding protein/permease	98.4	15.7	79.5
MGA_116	LOCUS_01150	sequence1:107882..109711(+)	frameshift		107880,109657	WP_002286325.1	ABC transporter ATP-binding protein/permease	97.2	76.3	60.4
MGA_117	LOCUS_01160	sequence1:109656..109877(+)	frameshift		109657	WP_002286325.1	ABC transporter ATP-binding protein/permease	100.0	9.4	64.4
MGA_121	LOCUS_01200	sequence1:114085..114393(-)	frameshift		114021,114117	WP_011101849.1	LacI family DNA-binding transcriptional regulator	90.2	29.5	56.5
MGA_128	LOCUS_01270	sequence1:121897..122253(+)	frameshift		122217,122452	WP_011101945.1	NAD(P)H-binding protein	90.7	54.0	71.0
MGA_129	LOCUS_01280	sequence1:122207..122470(+)	frameshift		122217,122452	WP_011101945.1	NAD(P)H-binding protein	87.4	38.4	71.1
MGA_147	LOCUS_01460	sequence1:142019..142522(+)	partial			WP_002900135.1	DUF1836 domain-containing protein	64.1	71.9	38.2
MGA_149	LOCUS_01480	sequence1:143004..144368(+)	partial			WP_011674061.1	YhgE/Pip domain-containing protein	99.1	46.6	49.1
MGA_150	LOCUS_01490	sequence1:144358..146352(+)	frameshift		144347,144341,146238	WP_103127164.1	YhgE/Pip family protein	96.7	54.5	43.7
MGA_157	LOCUS_01560	sequence1:149763..150701(+)	frameshift		150671	WP_003546946.1	glycoside hydrolase family 1 protein	96.8	65.9	58.7
MGA_158	LOCUS_01570	sequence1:150683..151144(+)	frameshift		150671	WP_003546946.1	glycoside hydrolase family 1 protein	96.7	32.4	65.1
MGA_206	LOCUS_02050	sequence1:196530..197558(+)	frameshift		197519	WP_011100960.1	ATP-dependent DNA helicase	95.9	41.8	59.7
MGA_207	LOCUS_02060	sequence1:197584..197781(+)	frameshift		197522,197730	WP_003592867.1	helicase C-terminal domain-containing protein	78.5	6.4	56.9
MGA_208	LOCUS_02070	sequence1:197741..198883(+)	frameshift		197522,197739	WP_011100960.1	ATP-dependent DNA helicase	99.2	47.4	45.8
MGA_215	LOCUS_02140	sequence1:204037..204741(+)	frameshift		204732	WP_003642429.1	redox-regulated ATPase YchF	99.1	63.4	84.9
MGA_216	LOCUS_02150	sequence1:204719..205144(+)	frameshift		204738	WP_011476456.1	redox-regulated ATPase YchF	94.3	36.3	83.5
MGA_234	LOCUS_02330	sequence1:220917..222239(+)	frameshift		222149	WP_011861594.1	glycosyltransferase	92.5	52.5	41.5
MGA_250	LOCUS_02490	sequence1:237484..237798(-)	frameshift		237896,237838	WP_002365813.1	multidrug effflux MFS transporter	75.0	19.8	61.5
MGA_251	LOCUS_02500	sequence1:237882..238661(-)	frameshift		237896,237838	WP_011101013.1	multidrug effflux MFS transporter	98.5	64.7	66.3
MGA_252	LOCUS_02510	sequence1:238942..239325(-)	frameshift		238950	WP_003642615.1	N-acetyltransferase GCN5	92.1	67.8	53.4
MGA_254	LOCUS_02530	sequence1:240372..240842(+)	partial			WP_011107751.1	cyclophilin-like fold protein	91.0	42.9	22.8
MGA_276	LOCUS_02750	sequence1:251810..252316(-)	frameshift		251824	WP_003815463.1	GTP pyrophosphokinase family protein	96.4	68.2	44.6
MGA_277	LOCUS_02760	sequence1:252464..252943(+)	frameshift		252880	WP_003641763.1	dihydroxyacetone kinase subunit DhaK	87.4	41.9	72.7
MGA_278	LOCUS_02770	sequence1:252936..253457(+)	frameshift		252880	WP_003548125.1	dihydroxyacetone kinase subunit DhaK	100.0	52.6	68.4
MGA_281	LOCUS_02800	sequence1:254638..255237(+)	partial			WP_010905524.1	MarR family transcriptional regulator	73.9	54.3	31.6
MGA_301	LOCUS_03000	sequence1:278666..280003(+)	partial			WP_003642847.1	BCCT family transporter	91.2	73.2	56.2
MGA_308	LOCUS_03070	sequence1:284662..286179(+)	frameshift		284660	WP_002288947.1	oligoendopeptidase F	99.6	83.4	42.3
MGA_310	LOCUS_03090	sequence1:287557..287718(+)	frameshift		287688	WP_011707753.1	ornithine carbamoyltransferase	83.0	13.2	65.9
MGA_311	LOCUS_03100	sequence1:287708..288193(+)	frameshift		287688,288178	WP_001830522.1	ornithine carbamoyltransferase	99.4	48.0	74.4
MGA_312	LOCUS_03110	sequence1:288171..288560(+)	frameshift		288187	WP_000793596.1	ornithine carbamoyltransferase	97.7	38.0	74.6
MGA_316	LOCUS_03150	sequence1:292458..292724(+)	frameshift		292712	WP_002286721.1	arginine-ornithine antiporter	76.1	14.4	52.9
MGA_317	LOCUS_03160	sequence1:292741..293880(+)	frameshift		292718	WP_002286721.1	arginine-ornithine antiporter	99.5	79.5	53.9
MGA_328	LOCUS_03270	sequence1:307974..308429(+)	frameshift		308405	WP_011476272.1	AEC family transporter	96.0	45.0	65.5
MGA_329	LOCUS_03280	sequence1:308419..308946(+)	frameshift		308408	WP_003563892.1	AEC family transporter	98.9	54.0	64.6
MGA_331	LOCUS_03300	sequence1:309642..310877(-)	partial			WP_002326842.1	LTA synthase family protein	97.3	44.5	42.7
MGA_341	LOCUS_03400	sequence1:318834..323723(-)	partial			WP_003243463.1	teichoic acid poly(glycerol phosphate) polymerase	24.1	52.9	43.7
MGA_346	LOCUS_03450	sequence1:329011..330189(+)	partial			WP_003243463.1	teichoic acid poly(glycerol phosphate) polymerase	98.5	52.4	48.0
MGA_347	LOCUS_03460	sequence1:330392..332278(+)	partial			WP_011476405.1	C39 family peptidase	26.1	18.0	45.1
MGA_349	LOCUS_03480	sequence1:333095..334210(-)	frameshift		334232	WP_003641223.1	MDR family MFS transporter	97.8	73.8	65.6
MGA_350	LOCUS_03490	sequence1:334167..334574(-)	frameshift		334232	WP_003641223.1	MDR family MFS transporter	84.4	23.2	75.4
MGA_360	LOCUS_03590	sequence1:342350..342598(-)	frameshift,internal_stop_codon	342701..342703(-)	342723,342707	WP_011674013.1	FAD/NAD(P)-binding protein	92.7	12.4	40.8
MGA_361	LOCUS_03600	sequence1:342673..344214(-)	frameshift,internal_stop_codon	342701..342703(-)	342723,342707	WP_011674013.1	FAD/NAD(P)-binding protein	96.9	80.3	38.6
MGA_369	LOCUS_03680	sequence1:350834..351526(-)	frameshift		351524	WP_011254084.1	ROK family protein	95.2	72.5	37.0
MGA_370	LOCUS_03690	sequence1:351417..351776(-)	frameshift		351524	WP_003721732.1	ROK family protein	64.7	25.7	39.0
MGA_396	LOCUS_03950	sequence1:378635..379120(+)	frameshift		379075,379094	WP_003642081.1	oligosaccharide flippase family protein	90.1	27.2	63.4
MGA_397	LOCUS_03960	sequence1:379120..380124(+)	frameshift		379977,379075,379094	WP_003642081.1	oligosaccharide flippase family protein	85.6	53.9	48.6
MGA_398	LOCUS_03970	sequence1:380027..380221(+)	frameshift		379977	WP_002361558.1	polysaccharide biosynthesis protein	60.9	7.4	66.7
MGA_412	LOCUS_04100	sequence1:398523..398792(+)	frameshift		398768,398524	WP_011101054.1	pyrroline-5-carboxylate reductase	80.9	27.0	40.3
MGA_413	LOCUS_04110	sequence1:398815..399261(+)	frameshift		398768	WP_011101054.1	pyrroline-5-carboxylate reductase	98.6	55.5	68.5
MGA_441	LOCUS_04390	sequence1:429837..430658(+)	frameshift		430646	WP_003549082.1	cysteine--tRNA ligase	98.9	56.8	74.9
MGA_442	LOCUS_04400	sequence1:430651..431250(+)	frameshift		430646	WP_011476233.1	cysteine--tRNA ligase	99.5	42.3	56.3
MGA_479	LOCUS_04770	sequence1:458700..460280(+)	frameshift		460256	WP_003645864.1	phosphoribosylformylglycinamidine synthase subunit PurL	98.3	70.1	66.8
MGA_480	LOCUS_04780	sequence1:460264..460908(+)	frameshift		460262	WP_002288015.1	phosphoribosylformylglycinamidine synthase subunit PurL	96.3	28.0	51.7
MGA_483	LOCUS_04810	sequence1:463408..463776(+)	frameshift		463758	WP_011101893.1	phosphoribosylglycinamide formyltransferase	94.3	59.9	51.3
MGA_484	LOCUS_04820	sequence1:463715..463990(+)	frameshift		463764	WP_002369276.1	phosphoribosylglycinamide formyltransferase	80.2	38.4	54.8
MGA_492	LOCUS_04900	sequence1:471879..472433(-)	partial			WP_012869204.1	folate family ECF transporter S component	50.5	52.2	28.1
MGA_546	LOCUS_05440	sequence1:518911..519465(+)	frameshift		519442,519429	WP_002381364.1	energy-coupling factor ABC transporter ATP-binding protein	94.0	59.9	64.2
MGA_547	LOCUS_05450	sequence1:519462..519782(+)	frameshift		519445,519429	WP_003641276.1	energy-coupling factor ABC transporter ATP-binding protein	90.6	32.5	59.4
MGA_552	LOCUS_05500	sequence1:522422..524824(-)	partial			WP_011101323.1	MucBP domain-containing protein	43.6	35.2	23.1
MGA_557	LOCUS_05550	sequence1:527076..528224(-)	partial			WP_025479011.1	DUF4767 domain-containing protein	41.6	67.8	34.0
MGA_572	LOCUS_05700	sequence1:546942..547670(+)	internal_stop_codon	547668..547670(+)		WP_011101571.1	restriction endonuclease	93.4	79.1	36.2
MGA_577	LOCUS_05750	sequence1:552431..553177(+)	frameshift		553144,553229	WP_003568836.1	gluconate:H+ symporter	91.5	50.4	83.7
MGA_578	LOCUS_05760	sequence1:553216..553785(+)	frameshift		553144,553235	WP_003568836.1	gluconate:H+ symporter	86.8	36.4	84.8
MGA_591	LOCUS_05890	sequence1:565774..566265(+)	frameshift		566229	WP_003642583.1	NADPH-dependent FMN reductase	95.1	76.7	68.4
MGA_592	LOCUS_05900	sequence1:566225..566407(+)	frameshift		566229	WP_003701157.1	NAD(P)H-dependent oxidoreductase	81.7	24.4	53.1
MGA_593	LOCUS_05910	sequence1:566404..567345(+)	frameshift		567333	WP_011101897.1	PAS domain-containing protein	99.0	72.2	62.4
MGA_594	LOCUS_05920	sequence1:567320..567709(+)	frameshift		567333	WP_011476402.1	NADPH-dependent oxidoreductase	95.3	27.4	53.0
MGA_613	LOCUS_06110	sequence1:584938..585135(+)	frameshift,internal_stop_codon	585220..585222(+)	585114	WP_003568488.1	ABC transporter ATP-binding protein	90.8	25.3	76.3
MGA_614	LOCUS_06120	sequence1:585246..585641(+)	frameshift,internal_stop_codon	585220..585222(+)	585114	WP_003568488.1	ABC transporter ATP-binding protein	99.2	55.8	74.6
MGA_615	LOCUS_06130	sequence1:585651..586580(+)	frameshift,internal_stop_codon	586578..586580(+)	586601	WP_011673937.1	ABC transporter permease	78.0	27.9	49.8
MGA_616	LOCUS_06140	sequence1:586690..588264(+)	partial			WP_011673937.1	ABC transporter permease	98.9	60.3	50.8
MGA_635	LOCUS_06330	sequence1:602603..602923(+)	frameshift		602522	WP_011475557.1	DUF975 family protein	86.8	36.2	48.9
MGA_640	LOCUS_06380	sequence1:607076..607312(+)	frameshift		607008	WP_011837646.1	DNA-3-methyladenine glycosylase I	92.3	39.1	36.1
MGA_658	LOCUS_06560	sequence1:625211..626395(+)	frameshift		626392	WP_015381020.1	cardiolipin synthase	95.9	79.0	49.9
MGA_659	LOCUS_06570	sequence1:626388..626639(+)	frameshift		626392	WP_003700053.1	cardiolipin synthase	97.6	16.3	56.8
MGA_661	LOCUS_06590	sequence1:627966..628175(+)	frameshift		628127	WP_011674319.1	pitrilysin family protein	82.6	13.3	36.8
MGA_662	LOCUS_06600	sequence1:628210..629259(+)	frameshift		628139	WP_011476181.1	pitrilysin family protein	98.0	79.4	43.6
MGA_669	LOCUS_06670	sequence1:635831..636886(+)	frameshift		636859	WP_011101708.1	DNA mismatch repair protein MutS	97.7	38.1	70.6
MGA_670	LOCUS_06680	sequence1:636846..638453(+)	frameshift		636859	WP_011101708.1	DNA mismatch repair protein MutS	99.1	61.9	67.9
MGA_673	LOCUS_06710	sequence1:641180..641455(+)	frameshift		641184,641431	WP_003641514.1	Holliday junction branch migration DNA helicase RuvB	90.1	24.4	90.2
MGA_674	LOCUS_06720	sequence1:641436..642044(+)	frameshift		641184,642005,641431	WP_011476176.1	Holliday junction branch migration DNA helicase RuvB	94.1	56.5	72.1
MGA_677	LOCUS_06750	sequence1:644340..644714(+)	partial			WP_003700554.1	preprotein translocase subunit YajC	62.9	61.9	64.1
MGA_693	LOCUS_06910	sequence1:660266..661744(+)	frameshift		661741	WP_011101858.1	pyruvate oxidase	100.0	84.1	67.7
MGA_694	LOCUS_06920	sequence1:661737..662015(+)	frameshift		661741	WP_011101858.1	pyruvate oxidase	97.8	15.9	57.0
MGA_715	LOCUS_07130	sequence1:678649..679404(+)	frameshift		678461	WP_011475752.1	class I SAM-dependent methyltransferase	100.0	72.5	45.0
MGA_718	LOCUS_07160	sequence1:681528..682064(+)	partial			WP_012027595.1	DUF1027 domain-containing protein	84.3	71.8	34.6
MGA_729	LOCUS_07260	sequence1:694326..695363(+)	partial			WP_000628317.1	competence protein CoiA family protein	39.1	32.4	32.6
MGA_731	LOCUS_07280	sequence1:695678..695971(-)	frameshift		695716	WP_002368840.1	ClpXP adapter SpxH family protein	96.9	44.3	36.1
MGA_732	LOCUS_07290	sequence1:696139..696675(+)	frameshift		696666	WP_003640879.1	GTP pyrophosphokinase family protein	98.3	79.5	76.6
MGA_765	LOCUS_07620	sequence1:728518..728784(+)	frameshift		728772	WP_011475892.1	tetratricopeptide repeat protein	90.9	36.5	49.4
MGA_810	LOCUS_08070	sequence1:775342..775602(+)	partial			WP_003640701.1	hypothetical protein	76.7	68.8	66.7
MGA_831	LOCUS_08280	sequence1:795806..796363(+)	frameshift		796267	WP_003644472.1	DNA repair protein RecO	77.8	55.8	49.3
MGA_832	LOCUS_08290	sequence1:796299..796568(+)	frameshift		796258	WP_002288755.1	DNA repair protein RecO	94.4	31.1	46.4
MGA_835	LOCUS_08320	sequence1:800064..800588(+)	frameshift		800534	WP_011101607.1	DNA primase	90.8	25.4	57.9
MGA_836	LOCUS_08330	sequence1:800521..801927(+)	frameshift		800537	WP_011101607.1	DNA primase	99.4	74.6	45.1
MGA_846	LOCUS_08430	sequence1:815349..815768(+)	frameshift		815765	WP_003640600.1	S1-like domain-containing RNA-binding protein	100.0	46.8	52.5
MGA_847	LOCUS_08440	sequence1:815806..816216(+)	frameshift		815759	WP_011476057.1	S1 RNA-binding protein	99.3	46.9	60.0
MGA_848	LOCUS_08450	sequence1:816219..816716(+)	frameshift		816704	WP_003644441.1	site-specific tyrosine recombinase XerD	98.8	55.1	57.1
MGA_849	LOCUS_08460	sequence1:816763..817107(+)	frameshift		816710	WP_003700300.1	site-specific tyrosine recombinase XerD	99.1	39.0	72.6
MGA_852	LOCUS_08490	sequence1:818200..818604(+)	frameshift		818595	WP_003640596.1	SMC-Scp complex subunit ScpB	97.0	65.3	53.8
MGA_853	LOCUS_08500	sequence1:818792..819025(+)	frameshift		819007	WP_003640595.1	pseudouridine synthase	89.6	29.0	71.0
MGA_854	LOCUS_08510	sequence1:819051..819518(+)	frameshift		819007	WP_003640595.1	pseudouridine synthase	96.8	63.0	59.3
MGA_856	LOCUS_08530	sequence1:820530..820841(+)	frameshift		820911,821053,820775	WP_011101581.1	RecQ family ATP-dependent DNA helicase	79.6	17.1	45.1
MGA_858	LOCUS_08550	sequence1:821103..821429(+)	frameshift		821466,821402,820908,821053	WP_011476027.1	ATP-dependent DNA helicase RecQ	82.4	18.5	39.3
MGA_869	LOCUS_08660	sequence1:830110..830445(+)	frameshift		830400	WP_011101577.1	CCA tRNA nucleotidyltransferase	94.6	25.8	65.7
MGA_870	LOCUS_08670	sequence1:830435..831301(+)	frameshift		830397	WP_011475877.1	CCA tRNA nucleotidyltransferase	99.3	71.3	41.0
MGA_873	LOCUS_08700	sequence1:834173..834307(+)	frameshift		834286	WP_003723427.1	dihydrofolate reductase	86.4	23.8	57.9
MGA_874	LOCUS_08710	sequence1:834297..834659(+)	frameshift		834286	WP_011707142.1	type 3 dihydrofolate reductase	99.2	73.6	37.5
MGA_885	LOCUS_08820	sequence1:845216..845479(-)	frameshift		845477	WP_011109294.1	GNAT family N-acetyltransferase	94.3	17.9	40.2
MGA_890	LOCUS_08870	sequence1:848178..849965(+)	partial			WP_000725545.1	glycerophosphodiester phosphodiesterase	37.6	78.4	31.1
MGA_891	LOCUS_08880	sequence1:850218..850997(+)	partial			WP_010966323.1	acyltransferase family protein	96.9	73.9	27.1
MGA_893	LOCUS_08900	sequence1:851422..852546(+)	partial			WP_081581110.1	N-acetylmuramoyl-L-alanine amidase	49.5	17.9	46.8
MGA_900	LOCUS_08960	sequence2:5449..6588(+)	frameshift		6576	WP_003642931.1	ATP-dependent Clp protease ATP-binding subunit	100.0	53.8	81.0
MGA_901	LOCUS_08970	sequence2:6588..7562(+)	frameshift		6579	WP_003642931.1	ATP-dependent Clp protease ATP-binding subunit	99.7	45.9	89.5
MGA_907	LOCUS_09030	sequence2:13030..13377(+)	frameshift		13043,13365	WP_003640464.1	glycoside hydrolase family 65 protein	92.2	14.2	71.7
MGA_908	LOCUS_09040	sequence2:13418..15250(+)	frameshift		13371	WP_003640464.1	glycoside hydrolase family 65 protein	99.0	80.2	65.1
MGA_952	LOCUS_09480	sequence2:62440..62661(-)	frameshift		62457	WP_003131353.1	TMEM175 family protein	94.5	36.2	58.0
MGA_972	LOCUS_09680	sequence2:82891..83412(-)	partial			WP_011101094.1	DUF4373 domain-containing protein	95.4	55.8	58.4
MGA_975	LOCUS_09710	sequence2:84606..84998(-)	frameshift		84608	WP_011476359.1	QueT transporter family protein	91.5	72.1	47.1
MGA_980	LOCUS_09760	sequence2:87388..87969(-)	frameshift		87940	WP_011101636.1	molecular chaperone DnaK	94.8	29.9	72.0
MGA_981	LOCUS_09770	sequence2:87905..88330(-)	frameshift		87940,88319	WP_011101636.1	molecular chaperone DnaK	89.4	20.3	94.4
MGA_982	LOCUS_09780	sequence2:88269..89249(-)	frameshift		88319	WP_011101636.1	molecular chaperone DnaK	95.7	50.2	82.1
MGA_987	LOCUS_09830	sequence2:92992..93162(-)	frameshift		93139	WP_002360497.1	30S ribosome-binding factor RbfA	94.6	45.7	66.0
MGA_988	LOCUS_09840	sequence2:93134..93343(-)	frameshift		93139	WP_011101640.1	30S ribosome-binding factor RbfA	98.6	58.1	77.9
MGA_989	LOCUS_09850	sequence2:93360..96059(-)	partial			WP_011101641.1	translation initiation factor IF-2	72.7	76.0	73.3
MGA_1013	LOCUS_10090	sequence2:119962..121092(-)	partial			WP_002286484.1	peptidoglycan recognition family protein	55.3	61.0	44.1
MGA_1014	LOCUS_10100	sequence2:121076..121318(-)	partial			WP_011101133.1	phage holin	66.2	44.5	58.5
MGA_1016	LOCUS_10120	sequence2:121667..122149(-)	partial			WP_011031718.1	sugar O-acetyltransferase	71.2	57.5	38.6
MGA_1020	LOCUS_10160	sequence2:126397..127533(-)	partial			WP_010989947.1	phage tail protein	70.6	76.5	27.3
MGA_1022	LOCUS_10180	sequence2:128392..133659(-)	partial			WP_011101123.1	tape measure protein	30.8	42.1	28.1
MGA_1032	LOCUS_10280	sequence2:138540..139673(-)	partial			WP_081708749.1	polymorphic toxin type 50 domain-containing protein	95.2	73.5	41.5
MGA_1058	LOCUS_10540	sequence2:152214..152879(+)	partial			WP_010971587.1	transcriptional repressor LexA	57.5	51.2	39.4
MGA_1059	LOCUS_10550	sequence2:152935..153726(+)	partial			WP_003642381.1	DUF805 domain-containing protein	72.2	46.1	49.5
MGA_1060	LOCUS_10560	sequence2:153846..154307(+)	partial			WP_010774187.1	hypothetical protein	39.2	30.5	45.0
MGA_1129	LOCUS_11250	sequence2:212252..212533(-)	frameshift		212601,212459	WP_011475815.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	91.4	30.3	40.9
MGA_1130	LOCUS_11260	sequence2:212536..213186(-)	frameshift		212601,212462	WP_002366931.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	90.3	63.8	51.3
MGA_1131	LOCUS_11270	sequence2:213390..213923(-)	frameshift		213407	WP_003640330.1	glycerophosphodiester phosphodiesterase	94.4	68.4	64.7
MGA_1139	LOCUS_11350	sequence2:217524..218648(-)	frameshift		218763,218782	WP_003640321.1	penicillin-binding protein 2	91.7	50.4	58.9
MGA_1140	LOCUS_11360	sequence2:218780..219616(-)	frameshift		218763,218782	WP_003640321.1	penicillin-binding protein 2	100.0	41.4	51.2
MGA_1141	LOCUS_11370	sequence2:219811..220608(+)	frameshift		220587	WP_011101465.1	YfhO family protein	98.5	29.7	43.1
MGA_1142	LOCUS_11380	sequence2:220613..222367(+)	frameshift		220587	WP_011101465.1	YfhO family protein	97.4	65.2	32.9
MGA_1145	LOCUS_11410	sequence2:223564..224382(-)	frameshift		224404	WP_003640312.1	endolytic transglycosylase MltG	97.8	66.8	48.0
MGA_1146	LOCUS_11420	sequence2:224360..224731(-)	frameshift		224407	WP_011475970.1	endolytic transglycosylase MltG	85.4	27.7	41.0
MGA_1147	LOCUS_11430	sequence2:224818..225303(-)	frameshift		225283	WP_011101464.1	phenylalanine--tRNA ligase subunit beta	94.4	18.9	48.0
MGA_1148	LOCUS_11440	sequence2:225254..227248(-)	frameshift		225283	WP_011101464.1	phenylalanine--tRNA ligase subunit beta	98.0	80.4	57.2
MGA_1151	LOCUS_11470	sequence2:228929..229186(-)	frameshift		229271	WP_003640309.1	hydrolase	95.3	47.9	61.7
MGA_1152	LOCUS_11480	sequence2:229224..229439(-)	frameshift		229268	WP_003700135.1	HD domain-containing protein	80.3	32.8	64.9
MGA_1153	LOCUS_11490	sequence2:229537..230085(-)	frameshift		230025,230125,229985	WP_003640308.1	RNA methyltransferase	98.9	71.0	60.8
MGA_1154	LOCUS_11500	sequence2:230123..230305(-)	frameshift		230125	WP_011475968.1	RNA methyltransferase	93.3	22.1	46.4
MGA_1185	LOCUS_11810	sequence2:258150..258305(-)	frameshift		258360	WP_003640270.1	Bax inhibitor-1/YccA family protein	92.2	19.7	63.8
MGA_1186	LOCUS_11820	sequence2:258298..258849(-)	frameshift		258360	WP_003640270.1	Bax inhibitor-1/YccA family protein	85.8	66.4	44.3
MGA_1188	LOCUS_11840	sequence2:260303..262219(-)	partial			WP_011101414.1	DNA translocase FtsK	71.8	46.1	71.0
MGA_1198	LOCUS_11940	sequence2:268848..269312(-)	partial			WP_002371471.1	AAA family ATPase	98.1	16.8	32.7
MGA_1199	LOCUS_11950	sequence2:269323..271425(-)	frameshift		269325	WP_011101396.1	AAA family ATPase	97.1	79.3	24.4
MGA_1200	LOCUS_11960	sequence2:271415..272212(-)	frameshift		272189	WP_003645226.1	DNA repair exonuclease	92.8	60.1	33.1
MGA_1201	LOCUS_11970	sequence2:272178..272639(-)	frameshift		272180	WP_000238227.1	exonuclease SbcCD subunit D	100.0	38.2	43.1
MGA_1211	LOCUS_12070	sequence2:282868..283680(-)	partial			WP_011101964.1	DNA/RNA non-specific endonuclease	82.2	71.3	59.4
MGA_1225	LOCUS_12210	sequence2:294530..295060(+)	frameshift		295042	WP_003569460.1	NAD(P)H-hydrate dehydratase	86.4	55.3	49.3
MGA_1226	LOCUS_12220	sequence2:295137..295370(+)	frameshift		295042	WP_003569460.1	NAD(P)H-hydrate dehydratase	93.5	26.4	47.2
MGA_1240	LOCUS_12340	sequence2:317207..317719(-)	frameshift		317768	WP_003643292.1	glycosyltransferase family 4 protein	90.0	39.0	64.7
MGA_1241	LOCUS_12350	sequence2:317712..318074(-)	frameshift		317768,318066,318139	WP_003643292.1	glycosyltransferase family 4 protein	82.5	25.0	62.6
MGA_1242	LOCUS_12360	sequence2:318137..318385(-)	frameshift		318066,318139	WP_003643292.1	glycosyltransferase family 4 protein	100.0	20.9	80.5
MGA_1243	LOCUS_12370	sequence2:318606..319250(-)	frameshift		318617,318514	WP_011100893.1	alpha/beta hydrolase	99.1	81.5	38.7
MGA_1251	LOCUS_12450	sequence2:327664..328458(-)	frameshift		328489	WP_003643227.1	peptide chain release factor 3	97.3	49.0	84.4
MGA_1252	LOCUS_12460	sequence2:328478..329251(-)	frameshift		328489	WP_003704258.1	peptide chain release factor 3	98.8	49.0	77.0
MGA_1254	LOCUS_12480	sequence2:329799..330386(-)	frameshift,internal_stop_codon	329823..329825(-)	330402,329849,330418	WP_003643221.1	AI-2E family transporter	94.9	46.6	64.9
MGA_1265	LOCUS_12590	sequence2:340530..340697(-)	frameshift		340692	WP_011101273.1	Gfo/Idh/MocA family oxidoreductase	92.7	14.6	62.7
MGA_1269	LOCUS_12630	sequence2:342996..343448(-)	frameshift		343007,343495,343407,343511	WP_011100869.1	NAD(P)H-dependent oxidoreductase	78.0	54.4	70.9
MGA_1278	LOCUS_12710	sequence3:7886..8665(-)	partial			WP_013097856.1	glycosyltransferase family 2 protein	85.7	71.0	26.0
MGA_1282	LOCUS_12750	sequence3:11978..12946(-)	partial			WP_000998260.1	glycosyltransferase	71.7	34.0	38.0
MGA_1311	LOCUS_13040	sequence3:38379..38840(+)	partial			WP_225852596.1	recombinase family protein	100.0	46.8	66.0
MGA_1313	LOCUS_13060	sequence3:39298..39720(-)	internal_stop_codon	39835..39837(-)		WP_011101571.1	restriction endonuclease	99.3	45.0	50.7
MGA_1317	LOCUS_13100	sequence3:43853..44755(+)	partial			WP_011101247.1	ISL3-like element ISP1 family transposase	100.0	71.4	66.0
MGA_1319	LOCUS_13120	sequence3:46057..46344(+)	partial			WP_003566883.1	asparagine synthase (glutamine-hydrolyzing)	82.1	12.3	70.5
MGA_1322	LOCUS_13150	sequence3:48467..49153(+)	partial			WP_011254599.1	ABC transporter ATP-binding protein	99.6	38.7	44.1
MGA_1329	LOCUS_13220	sequence3:51880..52599(-)	frameshift		52546	WP_003642879.1	PatB family C-S lyase	97.5	59.9	56.7
MGA_1330	LOCUS_13230	sequence3:52526..53047(-)	frameshift		52549	WP_003642879.1	PatB family C-S lyase	96.0	42.9	54.2
MGA_1334	LOCUS_13270	sequence3:57013..57402(-)	partial			WP_167372316.1	DUF6056 family protein	86.0	15.0	35.7
MGA_1341	LOCUS_13340	sequence3:62281..63309(-)	partial			WP_002287681.1	Fe-S cluster assembly protein SufD	50.3	40.2	40.1
MGA_1345	LOCUS_13380	sequence3:66896..68182(-)	partial			WP_005093506.1	Nramp family divalent metal transporter	83.4	63.0	32.3
MGA_1346	LOCUS_13390	sequence3:68511..68711(-)	frameshift		68740	WP_011101948.1	YjjG family noncanonical pyrimidine nucleotidase	86.4	25.1	49.1
MGA_1347	LOCUS_13400	sequence3:68711..69193(-)	frameshift		68740	WP_011101948.1	YjjG family noncanonical pyrimidine nucleotidase	93.8	66.1	46.7
MGA_1351	LOCUS_13440	sequence3:72375..72953(-)	frameshift		72960	WP_011476475.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	100.0	31.7	62.5
MGA_1352	LOCUS_13450	sequence3:72928..74193(-)	frameshift		72960	WP_003641075.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	99.8	69.4	62.5
MGA_1354	LOCUS_13470	sequence3:75806..76735(-)	partial			WP_003641072.1	CdaR family protein	75.7	71.7	37.6
MGA_1358	LOCUS_13510	sequence3:79658..80044(+)	frameshift		79999	WP_003700597.1	3'-5' exonuclease	93.8	67.8	60.8
MGA_1363	LOCUS_13560	sequence3:81955..82344(+)	frameshift		82329	WP_003641058.1	Cof-type HAD-IIB family hydrolase	97.7	43.6	57.9
MGA_1364	LOCUS_13570	sequence3:82331..82828(+)	frameshift		82329	WP_003641058.1	Cof-type HAD-IIB family hydrolase	97.0	55.7	56.5
MGA_1378	LOCUS_13710	sequence3:95887..96285(-)	partial			WP_120171861.1	GBS Bsp-like repeat-containing protein	93.9	11.6	41.3
MGA_1379	LOCUS_13720	sequence3:96356..98182(-)	partial			WP_081581110.1	N-acetylmuramoyl-L-alanine amidase	28.0	16.2	51.7
MGA_1384	LOCUS_13770	sequence3:104141..104929(-)	frameshift		104979,104909	WP_003641029.1	excinuclease ABC subunit UvrB	96.9	38.1	76.4
MGA_1385	LOCUS_13780	sequence3:104971..106146(-)	frameshift		104909,104982	WP_003641029.1	excinuclease ABC subunit UvrB	99.5	58.3	83.3
MGA_1406	LOCUS_13990	sequence3:126238..126669(-)	frameshift		126751	WP_003700642.1	ComF family protein	100.0	62.3	43.1
MGA_1411	LOCUS_14040	sequence3:130242..130961(-)	frameshift		131008,130965	WP_003640987.1	APC family permease	100.0	39.1	77.4
MGA_1412	LOCUS_14050	sequence3:130958..131443(-)	frameshift		131456,130968,131008	WP_003640987.1	APC family permease	89.4	23.6	81.9
MGA_1413	LOCUS_14060	sequence3:131421..132077(-)	frameshift		131456	WP_003640987.1	APC family permease	95.0	33.9	74.4
MGA_1418	LOCUS_14110	sequence3:136184..137551(-)	frameshift		137540	WP_011101213.1	M1 family metallopeptidase	98.9	53.3	64.7
MGA_1419	LOCUS_14120	sequence3:137508..138719(-)	frameshift		137540	WP_011476551.1	M1 family metallopeptidase	99.5	47.5	73.6
MGA_1420	LOCUS_14130	sequence3:138768..139691(-)	frameshift		139707	WP_003566217.1	MFS transporter	96.4	62.9	55.4
MGA_1421	LOCUS_14140	sequence3:139612..140169(-)	frameshift		139710	WP_003566217.1	MFS transporter	83.2	32.8	70.8
MGA_1425	LOCUS_14180	sequence3:143016..143738(-)	frameshift		143772	WP_003644035.1	glutamine-hydrolyzing GMP synthase	100.0	46.3	90.0
MGA_1426	LOCUS_14190	sequence3:143758..144570(-)	frameshift		143775	WP_172824490.1	glutamine-hydrolyzing GMP synthase	96.7	51.1	75.6
MGA_1428	LOCUS_14210	sequence3:146744..147349(-)	frameshift		146721,146746	WP_003645583.1	DNA starvation/stationary phase protection protein	59.7	65.2	45.0
MGA_1430	LOCUS_14230	sequence3:148219..148548(-)	frameshift		148555	WP_003566294.1	type I pantothenate kinase	99.1	35.1	67.6
MGA_1431	LOCUS_14240	sequence3:148550..149137(-)	frameshift		148558	WP_003641152.1	type I pantothenate kinase	99.0	63.1	54.4
MGA_1451	LOCUS_14440	sequence3:169749..170255(-)	partial			WP_003641117.1	hypothetical protein	66.1	68.6	32.8
MGA_1459	LOCUS_14520	sequence3:175441..175845(+)	frameshift		175821	WP_011101183.1	Xaa-Pro dipeptidyl-peptidase	94.8	15.9	31.0
MGA_1460	LOCUS_14530	sequence3:175826..177880(+)	frameshift		175821	WP_011101183.1	Xaa-Pro dipeptidyl-peptidase	99.4	83.3	57.9
MGA_1476	LOCUS_14690	sequence3:192840..194492(+)	frameshift		194489,194495	WP_011101852.1	Na+/H+ antiporter	100.0	83.1	41.5
MGA_1477	LOCUS_14700	sequence3:194470..194817(+)	frameshift		194489,194495	WP_011101852.1	Na+/H+ antiporter	86.1	14.8	44.4
MGA_1479	LOCUS_14720	sequence3:196178..196543(+)	frameshift		196191	WP_003642665.1	helix-turn-helix transcriptional regulator	83.5	73.2	58.4
MGA_1482	LOCUS_14750	sequence3:198686..199351(-)	partial			WP_011475532.1	L,D-transpeptidase	67.0	70.8	62.2
MGA_1493	LOCUS_14860	sequence3:207504..207887(+)	frameshift		207848,207948,207982	WP_002325134.1	GyrI-like domain-containing protein	89.0	54.6	57.5
MGA_1495	LOCUS_14880	sequence3:208273..209127(-)	frameshift		208341	WP_003642346.1	aldo/keto reductase	92.3	84.2	64.4
MGA_1515	LOCUS_15080	sequence3:225031..227688(-)	partial			WP_011100953.1	MMPL family transporter	81.5	55.8	42.1
MGA_1527	LOCUS_15200	sequence3:240313..241515(-)	frameshift		241609,241612	WP_011101886.1	carbamoyl-phosphate synthase large subunit	98.8	37.4	65.4
MGA_1528	LOCUS_15210	sequence3:241565..243487(-)	frameshift		241609,241612	WP_011101886.1	carbamoyl-phosphate synthase large subunit	97.8	59.2	75.7
MGA_1531	LOCUS_15240	sequence3:245859..246044(-)	frameshift		246063	WP_001016166.1	aspartate carbamoyltransferase catalytic subunit	83.6	17.4	62.7
MGA_1532	LOCUS_15250	sequence3:246004..246786(-)	frameshift		246057	WP_011101888.1	aspartate carbamoyltransferase catalytic subunit	91.9	76.8	62.8
MGA_1540	LOCUS_15330	sequence3:252463..252768(+)	frameshift		252741	WP_011102167.1	GNAT family N-acetyltransferase	93.1	54.8	36.2
MGA_1571	LOCUS_15640	sequence3:282281..283279(-)	frameshift		283316	WP_003548236.1	DHA2 family efflux MFS transporter permease subunit	98.8	68.9	61.0
MGA_1572	LOCUS_15650	sequence3:283293..283721(-)	frameshift		283316	WP_011674808.1	DHA2 family efflux MFS transporter permease subunit	88.7	26.7	66.7
MGA_1580	LOCUS_15730	sequence3:288274..288948(-)	frameshift		288931	WP_003643825.1	TatD family hydrolase	96.4	83.7	60.2
MGA_1581	LOCUS_15740	sequence3:288923..289057(-)	frameshift		288931	WP_004468999.1	TatD family hydrolase	93.2	15.8	61.0
MGA_1633	LOCUS_16230	sequence4:33559..34785(-)	partial			WP_011101323.1	MucBP domain-containing protein	61.8	23.1	36.0
MGA_1636	LOCUS_16260	sequence4:38198..39217(+)	partial			WP_011014068.1	glycosyltransferase family 2 protein	98.2	70.8	34.4
MGA_1638	LOCUS_16280	sequence4:39476..40606(+)	partial			WP_010905509.1	collagen binding domain-containing protein	66.2	72.3	36.5
MGA_1657	LOCUS_16470	sequence4:62509..62682(+)	partial			WP_003246574.1	DUF2188 domain-containing protein	94.7	36.0	66.7
MGA_1666	LOCUS_16560	sequence4:69014..69331(+)	frameshift		69310	WP_002355340.1	N-acetylmuramic acid 6-phosphate etherase	94.3	33.4	59.6
MGA_1667	LOCUS_16570	sequence4:69324..69896(+)	frameshift		69310	WP_002355340.1	N-acetylmuramic acid 6-phosphate etherase	100.0	64.2	55.3
MGA_1679	LOCUS_16690	sequence4:81507..82349(-)	partial			WP_007052501.1	C4-dicarboxylate transporter DcuC	100.0	57.8	46.3
MGA_1680	LOCUS_16700	sequence4:82420..83205(+)	partial			WP_002287111.1	sigma-54-dependent transcriptional regulator	96.2	27.1	38.6
MGA_1686	LOCUS_16760	sequence4:86924..87133(+)	frameshift		87121	WP_002311505.1	HAD family phosphatase	91.3	30.0	50.8
MGA_1687	LOCUS_16770	sequence4:87193..87552(+)	frameshift		87103	WP_002355232.1	HAD family phosphatase	93.3	50.0	42.1
MGA_1695	LOCUS_16850	sequence4:97592..97819(+)	partial			WP_011102180.1	UDP-glucose--hexose-1-phosphate uridylyltransferase	93.3	14.4	71.4
MGA_1699	LOCUS_16890	sequence4:101809..102804(+)	frameshift		101873,102777,102892	WP_003641313.1	class II fumarate hydratase	91.2	65.7	76.2
MGA_1700	LOCUS_16900	sequence4:102906..103229(+)	frameshift		102780,102895	WP_011476283.1	class II fumarate hydratase	100.0	23.3	72.9