# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_4	LOCUS_00030	sequence1:2328..2822(+)	partial			WP_011109294.1	GNAT family N-acetyltransferase	93.9	33.8	38.7
MGA_7	LOCUS_00060	sequence1:5225..6316(-)	frameshift		6338	WP_201626527.1	Na+/H+ antiporter NhaC family protein	94.8	77.0	43.3
MGA_23	LOCUS_00220	sequence1:20120..20875(-)	frameshift		20975	WP_003644434.1	tetratricopeptide repeat protein	100.0	60.4	37.3
MGA_24	LOCUS_00230	sequence1:20952..21389(-)	frameshift		20978	WP_003644434.1	tetratricopeptide repeat protein	95.9	32.9	54.0
MGA_48	LOCUS_00470	sequence1:46102..46911(-)	frameshift		46937	WP_011101607.1	DNA primase	100.0	43.5	37.1
MGA_49	LOCUS_00480	sequence1:46926..47963(-)	frameshift		46937	WP_011101607.1	DNA primase	98.6	54.3	56.6
MGA_73	LOCUS_00720	sequence1:72425..72685(-)	partial			WP_003640701.1	hypothetical protein	76.7	68.8	66.7
MGA_152	LOCUS_01510	sequence1:152662..153699(-)	partial			WP_010906110.1	competence protein CoiA	72.5	77.8	28.8
MGA_163	LOCUS_01610	sequence1:165960..166496(-)	partial			WP_012027595.1	DUF1027 domain-containing protein	84.3	71.8	34.6
MGA_165	LOCUS_01630	sequence1:167164..167865(-)	frameshift		167866	WP_011101694.1	amino acid permease	95.3	48.4	60.1
MGA_166	LOCUS_01640	sequence1:167852..168529(-)	frameshift		167869	WP_003703924.1	amino acid permease	96.0	47.8	65.3
MGA_192	LOCUS_01900	sequence1:189764..190360(-)	frameshift,internal_stop_codon	190372..190374(-)	190365	WP_011674284.1	glutamate racemase	93.4	38.8	60.6
MGA_199	LOCUS_01970	sequence1:195266..195580(-)	frameshift		195530	WP_011101703.1	alanine--tRNA ligase	81.7	9.7	67.1
MGA_200	LOCUS_01980	sequence1:195528..196406(-)	frameshift		195529,196516	WP_011476171.1	alanine--tRNA ligase	100.0	33.2	66.8
MGA_201	LOCUS_01990	sequence1:196487..197911(-)	frameshift		196492	WP_011101703.1	alanine--tRNA ligase	98.1	53.0	75.3
MGA_206	LOCUS_02040	sequence1:203308..203682(-)	partial			WP_003700554.1	preprotein translocase subunit YajC	62.9	61.9	64.1
MGA_212	LOCUS_02100	sequence1:209567..210355(-)	frameshift		210359	WP_011476178.1	DNA mismatch repair protein MutS	100.0	30.0	65.2
MGA_213	LOCUS_02110	sequence1:210357..212189(-)	frameshift		210362	WP_011101708.1	DNA mismatch repair protein MutS	100.0	67.9	71.1
MGA_227	LOCUS_02250	sequence1:226023..226331(-)	frameshift		226311	WP_003641488.1	rod shape-determining protein MreC	92.2	33.5	54.3
MGA_228	LOCUS_02260	sequence1:226288..226869(-)	frameshift		226314	WP_003641488.1	rod shape-determining protein MreC	96.4	66.5	46.0
MGA_229	LOCUS_02270	sequence1:226968..227318(-)	frameshift		227337	WP_003700474.1	DNA repair protein RadC	99.1	51.1	49.6
MGA_242	LOCUS_02400	sequence1:240706..240942(-)	frameshift		241009	WP_011837646.1	DNA-3-methyladenine glycosylase I	92.3	39.1	36.1
MGA_266	LOCUS_02640	sequence1:262375..262683(-)	frameshift		262716,262902	WP_003568488.1	ABC transporter ATP-binding protein	100.0	43.8	79.4
MGA_267	LOCUS_02650	sequence1:262676..262885(-)	frameshift		262716,262902	WP_003568488.1	ABC transporter ATP-binding protein	78.3	23.2	74.1
MGA_268	LOCUS_02660	sequence1:262882..263079(-)	frameshift		262728,262905	WP_003568488.1	ABC transporter ATP-binding protein	90.8	25.3	76.3
MGA_270	LOCUS_02680	sequence1:263884..264180(-)	frameshift		264202	WP_003548972.1	serine hydroxymethyltransferase	100.0	23.8	57.1
MGA_271	LOCUS_02690	sequence1:264188..265117(-)	frameshift		264202	WP_011101725.1	serine hydroxymethyltransferase	99.4	74.5	69.7
MGA_272	LOCUS_02700	sequence1:265131..265592(-)	frameshift		265608	WP_003641435.1	L-threonylcarbamoyladenylate synthase	98.0	44.0	53.3
MGA_273	LOCUS_02710	sequence1:265543..266154(-)	frameshift		265608	WP_003641435.1	L-threonylcarbamoyladenylate synthase	88.7	53.4	66.9
MGA_282	LOCUS_02800	sequence1:274953..275156(-)	frameshift		275145	WP_003644665.1	ABC transporter ATP-binding protein	89.6	10.4	71.7
MGA_310	LOCUS_03080	sequence1:301216..301980(-)	frameshift		301993	WP_011101269.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	99.6	55.6	63.4
MGA_311	LOCUS_03090	sequence1:301922..302584(-)	frameshift		301993	WP_011101269.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	89.1	42.9	58.2
MGA_312	LOCUS_03100	sequence1:302703..303167(-)	frameshift		303174	WP_003641344.1	diacylglycerol kinase	100.0	47.4	60.9
MGA_313	LOCUS_03110	sequence1:303169..303705(-)	frameshift		303174	WP_003641344.1	diacylglycerol kinase	99.4	52.1	80.2
MGA_314	LOCUS_03120	sequence1:303733..304386(-)	frameshift		304399	WP_003641343.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	100.0	45.8	71.4
MGA_315	LOCUS_03130	sequence1:304316..305161(-)	frameshift		304402	WP_003641343.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	90.4	53.4	77.2
MGA_324	LOCUS_03220	sequence1:313742..314239(+)	frameshift		314230	WP_003642534.1	phosphoglycerate dehydrogenase	90.3	45.9	36.7
MGA_325	LOCUS_03230	sequence1:314217..314690(+)	frameshift		314230	WP_003642534.1	phosphoglycerate dehydrogenase	96.8	48.1	49.3
MGA_328	LOCUS_03260	sequence1:319802..320950(+)	partial			WP_025479011.1	DUF4767 domain-containing protein	43.7	70.7	33.1
MGA_376	LOCUS_03740	sequence1:358259..359176(-)	frameshift		359099	WP_003644085.1	serine--tRNA ligase	92.5	65.9	76.6
MGA_377	LOCUS_03750	sequence1:359070..359540(-)	frameshift		359102	WP_003644085.1	serine--tRNA ligase	96.2	35.3	62.7
MGA_381	LOCUS_03790	sequence1:362894..363265(+)	frameshift		363235	WP_003641232.1	alpha/beta hydrolase	92.7	42.8	40.2
MGA_382	LOCUS_03800	sequence1:363321..363692(+)	frameshift		363235	WP_003641232.1	alpha/beta hydrolase	96.7	45.5	50.8
MGA_384	LOCUS_03820	sequence1:365209..365739(-)	frameshift		365959	WP_003130103.1	ROK family protein	92.6	56.7	64.2
MGA_385	LOCUS_03830	sequence1:365942..366082(-)	frameshift		365959	WP_003641780.1	fructokinase	89.1	14.2	70.7
MGA_394	LOCUS_03920	sequence1:372864..373418(+)	partial			WP_012869204.1	folate family ECF transporter S component	50.5	52.2	28.1
MGA_396	LOCUS_03940	sequence1:373686..374021(-)	frameshift		374059	WP_010706768.1	hypothetical protein	98.2	41.4	64.2
MGA_410	LOCUS_04080	sequence1:388264..388617(-)	frameshift		388762	WP_011101896.1	5-(carboxyamino)imidazole ribonucleotide synthase	92.3	29.0	67.9
MGA_411	LOCUS_04090	sequence1:388760..388954(-)	frameshift		388985,388762	WP_003594887.1	5-(carboxyamino)imidazole ribonucleotide synthase	98.4	17.0	52.4
MGA_412	LOCUS_04100	sequence1:388974..389405(-)	frameshift		388985,388762	WP_011101896.1	5-(carboxyamino)imidazole ribonucleotide synthase	93.0	34.6	62.4
MGA_472	LOCUS_04700	sequence1:444827..445675(-)	frameshift		445685	WP_003644997.1	N-acetylglucosamine-6-phosphate deacetylase	99.3	74.1	72.5
MGA_473	LOCUS_04710	sequence1:445650..445970(-)	frameshift		445685	WP_003644997.1	N-acetylglucosamine-6-phosphate deacetylase	89.6	25.1	69.5
MGA_534	LOCUS_05310	sequence1:513012..514199(-)	partial			WP_003243463.1	teichoic acid poly(glycerol phosphate) polymerase	92.9	49.2	49.2
MGA_539	LOCUS_05360	sequence1:519332..524323(+)	partial			WP_003243463.1	teichoic acid poly(glycerol phosphate) polymerase	28.8	63.5	39.2
MGA_550	LOCUS_05470	sequence1:536821..537057(-)	frameshift		537088	WP_011254451.1	FAD-dependent oxidoreductase	98.7	17.0	72.7
MGA_551	LOCUS_05480	sequence1:537047..538192(-)	frameshift		537088	WP_011254451.1	FAD-dependent oxidoreductase	96.9	81.1	68.8
MGA_563	LOCUS_05600	sequence1:552471..552758(-)	frameshift		552780	WP_002355252.1	carbamate kinase	97.9	29.5	58.1
MGA_564	LOCUS_05610	sequence1:552778..553401(-)	frameshift		552786	WP_001074357.1	carbamate kinase	99.0	66.2	67.8
MGA_573	LOCUS_05700	sequence1:561969..563306(-)	partial			WP_003642847.1	BCCT family transporter	91.2	73.2	56.2
MGA_576	LOCUS_05730	sequence1:565820..566323(+)	frameshift		566308	WP_003643965.1	EAL domain-containing protein	96.4	68.2	41.6
MGA_577	LOCUS_05740	sequence1:566205..566498(+)	frameshift		566305	WP_011101152.1	EAL domain-containing protein	88.7	40.7	37.0
MGA_593	LOCUS_05900	sequence1:584956..585507(-)	frameshift		585499	WP_010905525.1	multidrug efflux ABC transporter LmrA	96.2	30.1	76.7
MGA_594	LOCUS_05910	sequence1:585497..586735(-)	frameshift		585499	WP_010905525.1	multidrug efflux ABC transporter LmrA	95.6	67.1	53.8
MGA_595	LOCUS_05920	sequence1:586738..587337(-)	partial			WP_010905524.1	MarR family transcriptional regulator	73.9	54.3	31.6
MGA_613	LOCUS_06100	sequence1:596603..596953(-)	frameshift		596605	WP_011101563.1	GNAT family N-acetyltransferase	98.3	65.1	51.8
MGA_614	LOCUS_06110	sequence1:597077..597415(-)	frameshift		597208	WP_002359121.1	transcriptional regulator SylA	67.0	50.0	68.0
MGA_620	LOCUS_06170	sequence1:601136..601606(-)	partial			WP_011107751.1	cyclophilin-like fold protein	91.0	42.9	24.2
MGA_622	LOCUS_06190	sequence1:602093..602587(-)	frameshift		602146	WP_010906179.1	LysR family transcriptional regulator	94.5	53.1	54.8
MGA_632	LOCUS_06290	sequence1:610582..611334(+)	frameshift		611253	WP_000215631.1	HoxN/HupN/NixA family nickel/cobalt transporter	86.0	63.9	53.2
MGA_633	LOCUS_06300	sequence1:611282..611590(+)	frameshift		611253	WP_000215631.1	HoxN/HupN/NixA family nickel/cobalt transporter	90.2	27.2	45.7
MGA_637	LOCUS_06340	sequence1:614046..614552(-)	frameshift		614538	WP_003643604.1	LacI family DNA-binding transcriptional regulator	98.2	49.7	62.4
MGA_638	LOCUS_06350	sequence1:614470..615045(-)	frameshift		614547	WP_002414145.1	substrate-binding domain-containing protein	88.5	51.1	71.0
MGA_644	LOCUS_06410	sequence1:619648..620055(-)	frameshift		620057	WP_188367817.1	recombinase family protein	100.0	65.2	45.2
MGA_645	LOCUS_06420	sequence1:620043..620258(-)	frameshift		620075	WP_033728358.1	recombinase family protein	94.4	35.1	49.3
MGA_667	LOCUS_06640	sequence1:641171..641710(+)	partial			WP_009932650.1	NlpC/P60 family protein	69.8	53.7	44.0
MGA_670	LOCUS_06670	sequence1:643751..644068(+)	frameshift		644041	WP_003642454.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	91.4	19.8	53.1
MGA_671	LOCUS_06680	sequence1:644173..645168(+)	frameshift		644041	WP_003642454.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	100.0	68.8	63.4
MGA_696	LOCUS_06930	sequence1:667119..667691(-)	frameshift		667680	WP_002357254.1	PTS system mannose/fructose/sorbose family transporter subunit IID	97.4	68.8	60.5
MGA_697	LOCUS_06940	sequence1:667657..667944(-)	frameshift		667680	WP_002357254.1	PTS system mannose/fructose/sorbose family transporter subunit IID	90.5	32.0	70.9
MGA_698	LOCUS_06950	sequence1:667928..668242(-)	frameshift		668264	WP_002357253.1	PTS sugar transporter subunit IIC	100.0	33.4	50.9
MGA_699	LOCUS_06960	sequence1:668220..668846(-)	frameshift		668264	WP_002357253.1	PTS sugar transporter subunit IIC	93.8	65.2	66.2
MGA_712	LOCUS_07090	sequence1:680400..681140(-)	frameshift		681202,681123	WP_010905075.1	2-oxo acid dehydrogenase subunit E2	98.0	45.7	51.0
MGA_713	LOCUS_07100	sequence1:681065..681715(-)	frameshift		681202,681123	WP_010905075.1	2-oxo acid dehydrogenase subunit E2	81.5	32.1	56.4
MGA_715	LOCUS_07120	sequence1:682691..682978(-)	frameshift		683039	WP_010905077.1	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	98.9	25.1	54.3
MGA_716	LOCUS_07130	sequence1:683034..683810(-)	frameshift		683039	WP_010905077.1	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	97.7	68.7	68.1
MGA_722	LOCUS_07190	sequence1:689649..690284(-)	partial			WP_011101524.1	zinc ribbon domain-containing protein	85.8	66.6	32.7
MGA_725	LOCUS_07220	sequence1:694299..694802(-)	partial			WP_002900135.1	DUF1836 domain-containing protein	64.1	71.9	38.2
MGA_726	LOCUS_07230	sequence1:694822..695541(-)	frameshift		695491	WP_002288847.1	DegV family protein	92.9	77.6	47.7
MGA_727	LOCUS_07240	sequence1:695483..695686(-)	frameshift		695485	WP_003594344.1	DegV family protein	98.5	23.5	41.8
MGA_740	LOCUS_07370	sequence1:709882..710448(-)	frameshift		710462	WP_003641656.1	cell wall metabolism sensor histidine kinase WalK	100.0	30.1	75.0
MGA_741	LOCUS_07380	sequence1:710445..711728(-)	frameshift		710462	WP_003641656.1	cell wall metabolism sensor histidine kinase WalK	98.8	67.9	62.3
MGA_747	LOCUS_07440	sequence1:715146..716273(-)	frameshift		715144,715202	WP_010906178.1	MFS transporter	97.1	81.9	48.6
MGA_748	LOCUS_07450	sequence1:716493..716786(-)	frameshift		716797	WP_005168914.1	Cof-type HAD-IIB family hydrolase	94.8	33.7	43.5
MGA_749	LOCUS_07460	sequence1:716795..717313(-)	frameshift		716809	WP_011101579.1	Cof-type HAD-IIB family hydrolase	93.0	59.6	42.9
MGA_758	LOCUS_07550	sequence1:726941..728158(-)	frameshift		728162	WP_002286325.1	ABC transporter ATP-binding protein/permease	100.0	52.1	60.9
MGA_759	LOCUS_07560	sequence1:728145..729272(-)	frameshift		728162	WP_002286325.1	ABC transporter ATP-binding protein/permease	98.7	47.8	68.0
MGA_770	LOCUS_07670	sequence1:739479..739961(+)	frameshift		739910	WP_011102079.1	DUF1700 domain-containing protein	99.4	79.2	39.9
MGA_774	LOCUS_07710	sequence1:743328..743522(+)	partial			WP_010905285.1	helix-turn-helix transcriptional regulator	98.4	64.9	63.5
MGA_798	LOCUS_07950	sequence1:773768..775240(+)	frameshift		775451,775222	WP_003703396.1	DNA gyrase subunit A	98.4	56.7	84.9
MGA_799	LOCUS_07960	sequence1:775209..775454(+)	frameshift		775451,775222	WP_003703396.1	DNA gyrase subunit A	93.8	8.9	78.9
MGA_800	LOCUS_07970	sequence1:775387..776301(+)	frameshift		775451,775222	WP_003641633.1	DNA gyrase subunit A	84.9	29.9	69.8
MGA_806	LOCUS_08030	sequence1:780364..780978(+)	frameshift		780963	WP_003641638.1	replicative DNA helicase	98.5	42.2	69.2
MGA_807	LOCUS_08040	sequence1:781046..781762(+)	frameshift		780966	WP_003562690.1	replicative DNA helicase	97.1	50.0	82.8
MGA_808	LOCUS_08050	sequence1:781855..782904(+)	frameshift		782883	WP_003641639.1	MFS transporter	96.3	81.8	43.5
MGA_811	LOCUS_08080	sequence1:784747..785031(+)	frameshift		784983	WP_002387187.1	ABC-F type ribosomal protection protein Lsa(A)	83.0	15.7	53.8
MGA_812	LOCUS_08090	sequence1:784994..786232(+)	frameshift		784992	WP_002680900.1	ABC-F type ribosomal protection protein	96.1	80.4	43.2
MGA_816	LOCUS_08130	sequence1:788737..789309(+)	partial			WP_011101223.1	helix-turn-helix domain-containing protein	32.6	33.9	43.5
MGA_819	LOCUS_08160	sequence1:790748..791140(-)	frameshift		791286,791180,791326	WP_015704317.1	PTS cellobiose transporter subunit IIC	99.2	28.9	45.7
MGA_820	LOCUS_08170	sequence1:791324..791986(-)	frameshift		791329,791189,791286	WP_011254437.1	PTS transporter subunit EIIC	98.2	51.8	43.5
MGA_825	LOCUS_08220	sequence1:795094..795429(-)	partial			WP_012804602.1	metalloregulator ArsR/SmtB family transcription factor	83.8	64.1	31.2
MGA_844	LOCUS_08410	sequence1:811495..811959(-)	frameshift		812154,812013	WP_002387466.1	diacylglycerol kinase family lipid kinase	99.4	50.0	39.9
MGA_855	LOCUS_08520	sequence1:818349..818822(+)	frameshift		818277,818359	WP_011101719.1	serine hydrolase	96.8	40.4	48.7
MGA_856	LOCUS_08530	sequence1:818844..819146(+)	frameshift		819107	WP_011476433.1	zinc ribbon domain-containing protein	96.0	35.3	32.0
MGA_864	LOCUS_08610	sequence1:827429..827737(-)	frameshift		827702	WP_010890791.1	MerR family transcriptional regulator	72.5	48.7	41.9
MGA_884	LOCUS_08810	sequence1:848568..849452(+)	frameshift		849437	WP_011475563.1	heavy metal translocating P-type ATPase	99.3	48.5	65.9
MGA_885	LOCUS_08820	sequence1:849533..850378(+)	frameshift		849437	WP_011475563.1	heavy metal translocating P-type ATPase	96.8	45.0	59.6
MGA_891	LOCUS_08880	sequence1:854990..855397(+)	frameshift		855385	WP_003642679.1	Gfo/Idh/MocA family oxidoreductase	98.5	39.2	72.9
MGA_892	LOCUS_08890	sequence1:855432..856019(+)	frameshift		855388	WP_002286050.1	Gfo/Idh/MocA family oxidoreductase	99.5	56.6	78.4
MGA_911	LOCUS_09080	sequence1:865913..866758(-)	partial			WP_011254244.1	helix-turn-helix transcriptional regulator	21.7	33.3	45.9
MGA_913	LOCUS_09100	sequence1:867095..867637(+)	frameshift,internal_stop_codon	867635..867637(+)	867640	WP_010714143.1	Rha family transcriptional regulator	98.3	76.9	50.8
MGA_934	LOCUS_09300	sequence1:890550..890849(-)	frameshift		890844	WP_011101593.1	ArgE/DapE family deacylase	94.9	24.7	73.4
MGA_935	LOCUS_09310	sequence1:890824..891702(-)	frameshift		890844	WP_011101593.1	ArgE/DapE family deacylase	93.8	71.9	74.5
MGA_940	LOCUS_09360	sequence1:896570..901861(+)	partial			WP_003147473.1	Ig-like domain-containing protein	76.2	51.9	30.5
MGA_941	LOCUS_09370	sequence1:902385..910205(+)	partial			WP_207215633.1	MucBP domain-containing protein	33.2	70.5	30.2
MGA_946	LOCUS_09420	sequence1:913755..915428(-)	partial			WP_011101323.1	MucBP domain-containing protein	53.7	28.3	37.9
MGA_949	LOCUS_09450	sequence1:918395..919414(+)	partial			WP_011014068.1	glycosyltransferase family 2 protein	98.2	70.8	34.7
MGA_951	LOCUS_09470	sequence1:919673..920374(+)	frameshift		920350	WP_010989363.1	LPXTG cell wall anchor domain-containing protein	86.7	25.7	38.5
MGA_961	LOCUS_09570	sequence1:930159..930815(+)	frameshift		930776	WP_011101710.1	aspartate kinase	94.0	45.1	44.4
MGA_962	LOCUS_09580	sequence1:930715..931539(+)	frameshift		930776	WP_003546873.1	aspartate kinase	93.4	56.5	57.8
MGA_973	LOCUS_09690	sequence1:942707..942880(+)	partial			WP_003246574.1	DUF2188 domain-containing protein	94.7	36.0	66.7
MGA_984	LOCUS_09800	sequence1:952464..953306(-)	partial			WP_007052501.1	C4-dicarboxylate transporter DcuC	100.0	57.8	46.3
MGA_985	LOCUS_09810	sequence1:953377..954162(+)	partial			WP_002287111.1	sigma-54-dependent transcriptional regulator	96.2	27.1	38.6
MGA_991	LOCUS_09870	sequence1:957880..958089(+)	frameshift		958077	WP_002311505.1	HAD family phosphatase	91.3	30.0	50.8
MGA_992	LOCUS_09880	sequence1:958149..958508(+)	frameshift		958059	WP_002355232.1	HAD family phosphatase	93.3	50.0	42.1
MGA_1025	LOCUS_10210	sequence1:993453..993590(+)	frameshift		993578,993388	WP_011254444.1	NAD(P)H-binding protein	93.3	19.5	73.8
MGA_1026	LOCUS_10220	sequence1:993574..993900(+)	frameshift		993394,993572	WP_003642965.1	SDR family oxidoreductase	100.0	51.4	71.6
MGA_1034	LOCUS_10290	sequence1:1007961..1008089(+)	frameshift		1008083	WP_002289757.1	NAD(P)/FAD-dependent oxidoreductase	100.0	9.5	59.5
MGA_1060	LOCUS_10550	sequence1:1035661..1036089(+)	frameshift		1036065	WP_011674808.1	DHA2 family efflux MFS transporter permease subunit	88.7	26.7	66.7
MGA_1061	LOCUS_10560	sequence1:1036103..1037101(+)	frameshift		1036065	WP_003548236.1	DHA2 family efflux MFS transporter permease subunit	98.8	68.9	61.0
MGA_1099	LOCUS_10940	sequence1:1072627..1073181(+)	frameshift		1073118	WP_011101888.1	aspartate carbamoyltransferase catalytic subunit	94.6	55.9	63.2
MGA_1100	LOCUS_10950	sequence1:1073135..1073554(+)	frameshift		1073118	WP_011101888.1	aspartate carbamoyltransferase catalytic subunit	95.7	42.8	56.4
MGA_1103	LOCUS_10980	sequence1:1075926..1077815(+)	frameshift		1077800	WP_011101886.1	carbamoyl-phosphate synthase large subunit	99.4	59.1	75.7
MGA_1104	LOCUS_10990	sequence1:1077896..1079098(+)	frameshift		1077800	WP_011101886.1	carbamoyl-phosphate synthase large subunit	98.8	37.4	65.4
MGA_1105	LOCUS_11000	sequence1:1079110..1079346(+)	frameshift		1079289	WP_003645881.1	dihydroorotate dehydrogenase	76.9	19.7	66.7
MGA_1106	LOCUS_11010	sequence1:1079264..1080025(+)	frameshift		1079289,1080011,1079989	WP_003645881.1	dihydroorotate dehydrogenase	96.0	79.3	67.5
MGA_1117	LOCUS_11120	sequence1:1091724..1094381(+)	partial			WP_011100953.1	MMPL family transporter	81.5	55.8	42.1
MGA_1149	LOCUS_11440	sequence1:1120056..1120721(+)	partial			WP_011475532.1	L,D-transpeptidase	67.0	70.8	61.5
MGA_1156	LOCUS_11510	sequence1:1127774..1128235(+)	frameshift		1128181	WP_002287165.1	NAD(P)/FAD-dependent oxidoreductase	86.9	40.1	50.4
MGA_1157	LOCUS_11520	sequence1:1128235..1128759(+)	frameshift		1128184	WP_003642692.1	NAD(P)/FAD-dependent oxidoreductase	100.0	52.9	52.0
MGA_1178	LOCUS_11730	sequence1:1149134..1149640(+)	partial			WP_003641117.1	hypothetical protein	66.1	68.6	32.8
MGA_1193	LOCUS_11880	sequence1:1162925..1163815(-)	frameshift		1163853	WP_003566325.1	amino acid permease	94.9	51.7	47.4
MGA_1194	LOCUS_11890	sequence1:1163830..1164555(-)	frameshift		1163853	WP_003566325.1	amino acid permease	92.9	41.0	61.5
MGA_1204	LOCUS_11990	sequence1:1174812..1176041(+)	frameshift		1176038	WP_172824490.1	glutamine-hydrolyzing GMP synthase	98.8	78.9	79.0
MGA_1205	LOCUS_12000	sequence1:1176028..1176366(+)	frameshift		1176038	WP_003644035.1	glutamine-hydrolyzing GMP synthase	96.4	20.8	91.7
MGA_1212	LOCUS_12070	sequence1:1184072..1185214(+)	internal_stop_codon	1185212..1185214(+)		WP_057865751.1	type II CRISPR RNA-guided endonuclease Cas9	97.6	26.8	44.7
MGA_1213	LOCUS_12080	sequence1:1185242..1188112(+)	internal_stop_codon	1185212..1185214(+)		WP_057865751.1	type II CRISPR RNA-guided endonuclease Cas9	99.8	70.7	45.3
MGA_1247	LOCUS_12420	sequence1:1221759..1223582(+)	frameshift		1223573	WP_003643969.1	excinuclease ABC subunit UvrA	100.0	63.8	82.2
MGA_1248	LOCUS_12430	sequence1:1223710..1224603(+)	frameshift		1223573	WP_011476196.1	excinuclease ABC subunit UvrA	97.0	30.5	81.6
MGA_1252	LOCUS_12470	sequence1:1227706..1229262(+)	partial			WP_081581110.1	N-acetylmuramoyl-L-alanine amidase	32.8	16.2	51.7
MGA_1253	LOCUS_12480	sequence1:1229243..1230487(+)	partial			WP_011476394.1	glucosaminidase domain-containing protein	58.7	30.8	34.6
MGA_1276	LOCUS_12710	sequence1:1249632..1250561(+)	partial			WP_003641072.1	CdaR family protein	75.7	71.7	37.6
MGA_1283	LOCUS_12780	sequence1:1258369..1259517(+)	frameshift		1258313	WP_005093506.1	Nramp family divalent metal transporter	84.0	56.8	31.0
MGA_1287	LOCUS_12820	sequence1:1263061..1264089(+)	partial			WP_002287681.1	Fe-S cluster assembly protein SufD	50.3	40.2	40.1
MGA_1290	LOCUS_12850	sequence1:1265704..1266300(+)	frameshift		1266282	WP_003702990.1	Fe-S cluster assembly protein SufB	89.4	37.9	65.5
MGA_1291	LOCUS_12860	sequence1:1266275..1267114(+)	frameshift		1266285	WP_011674415.1	Fe-S cluster assembly protein SufB	98.9	57.7	69.2
MGA_1295	LOCUS_12900	sequence1:1268970..1269203(+)	internal_stop_codon	1269201..1269203(+)		WP_167372316.1	DUF6056 family protein	100.0	10.1	39.0
MGA_1356	LOCUS_13510	sequence2:60779..61468(+)	frameshift		61444	WP_011101526.1	phosphomevalonate kinase	98.3	61.7	64.0
MGA_1357	LOCUS_13520	sequence2:61557..61862(+)	frameshift		61447	WP_002355777.1	phosphomevalonate kinase	94.1	25.8	48.4
MGA_1370	LOCUS_13650	sequence2:73906..74385(+)	frameshift		74307	WP_011476108.1	C69 family dipeptidase	84.3	28.3	79.9
MGA_1371	LOCUS_13660	sequence2:74340..75146(+)	frameshift		74307	WP_011101518.1	C69 family dipeptidase	97.8	54.5	49.2
MGA_1380	LOCUS_13750	sequence2:82416..82937(-)	partial			WP_011101094.1	DUF4373 domain-containing protein	95.4	55.8	58.4
MGA_1389	LOCUS_13840	sequence2:88798..88941(-)	frameshift		88933	WP_011101637.1	nucleotide exchange factor GrpE	95.7	22.6	86.7
MGA_1390	LOCUS_13850	sequence2:88931..89371(-)	frameshift		88933	WP_011101637.1	nucleotide exchange factor GrpE	90.4	68.3	50.7
MGA_1391	LOCUS_13860	sequence2:89382..89984(-)	frameshift		89991	WP_003640713.1	heat-inducible transcriptional repressor HrcA	99.5	57.3	39.7
MGA_1392	LOCUS_13870	sequence2:89962..90423(-)	frameshift		89994	WP_003703155.1	heat-inducible transcriptional repressor HrcA	93.5	40.9	60.8
MGA_1396	LOCUS_13910	sequence2:92884..95640(-)	partial			WP_011101641.1	translation initiation factor IF-2	71.2	76.0	73.3
MGA_1400	LOCUS_13950	sequence2:97373..97612(-)	frameshift		97658	WP_002908122.1	ribosome maturation factor RimP	98.7	44.1	59.0
MGA_1401	LOCUS_13960	sequence2:97593..97850(-)	frameshift		97658	WP_002288499.1	ribosome maturation factor RimP	72.9	39.5	71.0
MGA_1403	LOCUS_13980	sequence2:102377..103618(-)	frameshift		103598	WP_003640732.1	proline--tRNA ligase	97.3	70.3	61.7
MGA_1404	LOCUS_13990	sequence2:103596..104093(-)	frameshift		103598	WP_003640732.1	proline--tRNA ligase	100.0	29.0	82.4
MGA_1415	LOCUS_14100	sequence2:112970..113434(+)	frameshift		112967	WP_003645630.1	1-acyl-sn-glycerol-3-phosphate acyltransferase	97.4	71.1	58.7
MGA_1445	LOCUS_14400	sequence2:134792..137329(-)	frameshift		137300	WP_011101482.1	chromosome segregation protein SMC	98.0	70.9	36.2
MGA_1446	LOCUS_14410	sequence2:137259..138323(-)	frameshift		137309	WP_011101482.1	chromosome segregation protein SMC	93.8	28.0	52.4
MGA_1468	LOCUS_14630	sequence2:159380..159559(-)	frameshift		159618	WP_003564679.1	TlyA family rRNA (cytidine-2'-O)-methyltransferase	89.8	19.2	49.1
MGA_1469	LOCUS_14640	sequence2:159562..160197(-)	frameshift		159618	WP_003640353.1	TlyA family rRNA (cytidine-2'-O)-methyltransferase	91.5	71.0	83.9
MGA_1499	LOCUS_14940	sequence2:179948..181165(-)	frameshift		181139	WP_003640321.1	penicillin-binding protein 2	91.6	55.0	58.8
MGA_1500	LOCUS_14950	sequence2:181134..182039(-)	frameshift		181139	WP_003640321.1	penicillin-binding protein 2	99.3	44.4	50.3
MGA_1542	LOCUS_15370	sequence2:222722..224638(-)	partial			WP_011101414.1	DNA translocase FtsK	71.8	46.1	71.0
MGA_1563	LOCUS_15580	sequence2:245284..246096(-)	partial			WP_011101964.1	DNA/RNA non-specific endonuclease	82.2	71.3	59.4
MGA_1566	LOCUS_15610	sequence2:248135..248725(-)	frameshift		248714	WP_003592802.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	98.0	37.1	57.8
MGA_1567	LOCUS_15620	sequence2:248697..249659(-)	frameshift		248717	WP_011475458.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	98.4	62.5	56.7
MGA_1583	LOCUS_15780	sequence2:264419..264850(-)	frameshift		264900	WP_003643189.1	MDR family MFS transporter	88.8	25.4	56.7
MGA_1584	LOCUS_15790	sequence2:264898..265908(-)	frameshift		264900	WP_003643189.1	MDR family MFS transporter	99.7	67.0	64.2
MGA_1601	LOCUS_15940	sequence2:290111..290992(-)	frameshift		291090	WP_003643227.1	peptide chain release factor 3	100.0	55.8	84.0
MGA_1602	LOCUS_15950	sequence2:291007..291678(-)	frameshift		291090	WP_003643227.1	peptide chain release factor 3	87.9	37.3	86.7
MGA_1617	LOCUS_16100	sequence2:304531..305118(-)	partial			WP_011101272.1	GH25 family lysozyme	97.9	74.0	35.6
MGA_1629	LOCUS_16220	sequence2:316332..317330(-)	partial			WP_002383750.1	glycosyltransferase	68.7	66.7	32.8
MGA_1630	LOCUS_16230	sequence2:317333..318250(-)	partial			WP_161799666.1	capsular polysaccharide synthesis protein	67.9	70.9	30.5
MGA_1639	LOCUS_16320	sequence2:325772..326350(-)	partial			WP_003605487.1	matrixin family metalloprotease	83.9	64.4	45.4
MGA_1641	LOCUS_16340	sequence2:328437..329003(-)	frameshift		329005	WP_000666827.1	thiaminase II	98.4	79.7	30.5
MGA_1651	LOCUS_16440	sequence2:336952..337143(+)	frameshift		337125	WP_010905995.1	SDR family oxidoreductase	92.1	23.9	77.6
MGA_1652	LOCUS_16450	sequence2:337211..337684(+)	frameshift		337125	WP_010905995.1	SDR family oxidoreductase	100.0	64.6	77.7
