{ "type": "genome", "identifier": "GCA_022486485.1", "organism": "Bifidobacterium tibiigranuli", "title": "Bifidobacterium tibiigranuli", "description": "derived from metagenome; incomplete metagenome", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCA_022486485.1", "bioproject": "PRJNA768545", "biosample": "SAMN22412177", "wgs_master": "JAKVKM000000000.1", "refseq_category": "na", "taxid": "2172043", "species_taxid": "2172043", "organism_name": "Bifidobacterium tibiigranuli", "infraspecific_name": "", "isolate": "UW_MP_BIF2_8", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/03/05", "asm_name": "ASM2248648v1", "submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCF_022486485.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/486/485/GCA_022486485.1_ASM2248648v1", "excluded_from_refseq": "derived from metagenome; incomplete metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-03-05", "dateModified": "2022-03-05", "datePublished": "2022-03-05", "_annotation": { "sample_count": 1, "sample_organism": [ "Bifidobacterium tibiigranuli" ], "sample_taxid": [ "2172043" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: Madison, WI", "Freezer" ], "sample_host_location_id": [], "data_size": "0.679 MB", "sample_ph_range": { "min": 55.0, "max": 55.0 }, "sample_temperature_range": { "min": 21.0, "max": 80.0 }, "completeness": 58.33, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": 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"organism_name": "Bifidobacterium scardovii", "strain": "strain=DSM 13734", "accession": "GCA_000770985.1", "taxid": 158787, "species_taxid": 158787, "relation_to_type": "type", "validated": true, "ani": 79.4686, "matched_fragments": 267, "total_fragments": 775, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bifidobacterium ramosum", "strain": "strain=TREM", "accession": "GCA_010667665.1", "taxid": 1798158, "species_taxid": 1798158, "relation_to_type": "type", "validated": true, "ani": 79.4307, "matched_fragments": 247, "total_fragments": 775, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bifidobacterium miconis", "strain": "strain=82T10", "accession": "GCA_019331735.1", "taxid": 2834435, "species_taxid": 2834435, "relation_to_type": "type", "validated": true, "ani": 79.4189, "matched_fragments": 249, "total_fragments": 775, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bifidobacterium simiiventris", "strain": "strain=81T8", "accession": "GCA_019331715.1", "taxid": 2834434, "species_taxid": 2834434, "relation_to_type": "type", "validated": true, "ani": 79.3675, "matched_fragments": 218, "total_fragments": 775, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bifidobacterium mongoliense", "strain": "strain=DSM 21395", "accession": "GCA_000771525.1", "taxid": 518643, "species_taxid": 518643, "relation_to_type": "type", "validated": true, "ani": 79.098, "matched_fragments": 230, "total_fragments": 775, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bifidobacterium miconisargentati", "strain": "strain=82T25", "accession": "GCA_019331675.1", "taxid": 2834437, "species_taxid": 2834437, "relation_to_type": "type", "validated": true, "ani": 78.9834, "matched_fragments": 254, "total_fragments": 775, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bifidobacterium pullorum subsp. saeculare", "strain": "strain=LMG 14934", 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