{
    "type": "genome",
    "identifier": "GCA_022561095.1",
    "organism": "Chloroflexota bacterium",
    "title": "Chloroflexota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Institute of Deep Sea Science and Engineering, Chines Academy of Sciences",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022561095.1",
        "bioproject": "PRJNA635214",
        "biosample": "SAMN16241994",
        "wgs_master": "JADFRV000000000.1",
        "refseq_category": "na",
        "taxid": "2026724",
        "species_taxid": "2026724",
        "organism_name": "Chloroflexota bacterium",
        "infraspecific_name": "",
        "isolate": "B8D1T2",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/14",
        "asm_name": "ASM2256109v1",
        "submitter": "Institute of Deep Sea Science and Engineering, Chines Academy of Sciences",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/561/095/GCA_022561095.1_ASM2256109v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-14",
    "dateModified": "2022-03-14",
    "datePublished": "2022-03-14",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Chloroflexota bacterium"
        ],
        "sample_taxid": [
            "2026724"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Pacific Ocean: Mariana Trench"
        ],
        "sample_host_location_id": [],
        "data_size": "0.643 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 0.46,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2274939",
        "Number of Sequences": "267",
        "Longest Sequences (bp)": "63991",
        "N50 (bp)": "10699",
        "Gap Ratio (%)": "0.003956",
        "GCcontent (%)": "64.5",
        "Number of CDSs": "2186",
        "Average Protein Length": "269.4",
        "Coding Ratio (%)": "77.7",
        "Number of rRNAs": "3",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Actinomadura graeca",
                "strain": "strain=32-07",
                "accession": "GCA_019175365.1",
                "taxid": 2750812,
                "species_taxid": 2750812,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2617,
                "matched_fragments": 56,
                "total_fragments": 627,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomadura rubrisoli",
                "strain": "strain=H3C3",
                "accession": "GCA_004349215.1",
                "taxid": 2530368,
                "species_taxid": 2530368,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.919,
                "matched_fragments": 52,
                "total_fragments": 627,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomadura montaniterrae",
                "strain": "strain=CYP1-1B",
                "accession": "GCA_008923365.1",
                "taxid": 1803903,
                "species_taxid": 1803903,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.889,
                "matched_fragments": 63,
                "total_fragments": 627,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 91.67,
            "contamination": 0.46,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_001795235.1",
                "gtdb_species": "s__RBG-16-64-32 sp001795235",
                "ani": 80.2045,
                "matched_fragments": 217,
                "total_fragments": 627,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SM23-28-2;f__RBG-16-64-32;g__RBG-16-64-32",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016178045.1",
                "gtdb_species": "s__JACOUE01 sp016178045",
                "ani": 78.1429,
                "matched_fragments": 205,
                "total_fragments": 627,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SM23-28-2;f__RBG-16-64-32;g__JACOUE01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011047455.1",
                "gtdb_species": "s__HRBIN24 sp011047455",
                "ani": 77.1151,
                "matched_fragments": 132,
                "total_fragments": 627,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SM23-28-2;f__HRbin24;g__HRBIN24",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001796995.1",
                "gtdb_species": "s__RBG-16-68-14 sp001796995",
                "ani": 77.07,
                "matched_fragments": 99,
                "total_fragments": 627,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__DSTF01;f__RBG-16-68-14;g__RBG-16-68-14",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002898615.1",
                "gtdb_species": "s__HRBIN25 sp002898615",
                "ani": 76.8018,
                "matched_fragments": 50,
                "total_fragments": 627,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SM23-28-2;f__HRbin24;g__HRBIN25",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.11",
                "min_intra_species_ani": "99.11",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_001303545.1",
                "gtdb_species": "s__SM23-28-2 sp001303545",
                "ani": 76.7252,
                "matched_fragments": 69,
                "total_fragments": 627,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SM23-28-2;f__SM23-28-2;g__SM23-28-2",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_005880055.1",
                "gtdb_species": "s__CF-162 sp005880055",
                "ani": 76.7234,
                "matched_fragments": 80,
                "total_fragments": 627,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SM23-28-2;f__RBG-16-64-32;g__CF-162",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011380505.1",
                "gtdb_species": "s__HRBIN24 sp011380505",
                "ani": 76.6676,
                "matched_fragments": 87,
                "total_fragments": 627,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SM23-28-2;f__HRbin24;g__HRBIN24",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.36",
                "min_intra_species_ani": "99.26",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.72",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_005882985.1",
                "gtdb_species": "s__CF-163 sp005882985",
                "ani": 76.492,
                "matched_fragments": 71,
                "total_fragments": 627,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SM23-28-2;f__RBG-16-64-32;g__CF-163",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.01",
                "min_intra_species_ani": "98.01",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_005880075.1",
                "gtdb_species": "s__CF-163 sp005880075",
                "ani": 76.4248,
                "matched_fragments": 62,
                "total_fragments": 627,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SM23-28-2;f__RBG-16-64-32;g__CF-163",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Dehalococcoidia",
        "o__SM23-28-2",
        "f__RBG-16-64-32",
        "g__JADFNQ01",
        "s__JADFNQ01 sp022561095"
    ],
    "_genome_taxon": [
        "Chloroflexota",
        "bacterium",
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Dehalococcoidia",
        "o__SM23-28-2",
        "f__RBG-16-64-32",
        "g__JADFNQ01",
        "s__JADFNQ01 sp022561095",
        "Bacteria",
        "Chloroflexota",
        "Dehalococcoidia",
        "SM23-28-2",
        "RBG-16-64-32",
        "JADFNQ01",
        "JADFNQ01",
        "sp022561095"
    ],
    "_meo": [
        {
            "id": "MEO_0000040",
            "label": "marine sediment"
        },
        {
            "id": "MEO_0001378",
            "label": "deep"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}