{
    "type": "genome",
    "identifier": "GCA_022563115.1",
    "organism": "Acidobacteriota bacterium",
    "title": "Acidobacteriota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Institute of Deep Sea Science and Engineering, Chines Academy of Sciences",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022563115.1",
        "bioproject": "PRJNA635214",
        "biosample": "SAMN16244011",
        "wgs_master": "JADFNY000000000.1",
        "refseq_category": "na",
        "taxid": "1978231",
        "species_taxid": "1978231",
        "organism_name": "Acidobacteriota bacterium",
        "infraspecific_name": "",
        "isolate": "B66T1B5",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/14",
        "asm_name": "ASM2256311v1",
        "submitter": "Institute of Deep Sea Science and Engineering, Chines Academy of Sciences",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/563/115/GCA_022563115.1_ASM2256311v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-14",
    "dateModified": "2022-03-14",
    "datePublished": "2022-03-14",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acidobacteriota bacterium"
        ],
        "sample_taxid": [
            "1978231"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Pacific Ocean: Mariana Trench"
        ],
        "sample_host_location_id": [],
        "data_size": "0.953 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 76.39,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3414457",
        "Number of Sequences": "447",
        "Longest Sequences (bp)": "29088",
        "N50 (bp)": "9046",
        "Gap Ratio (%)": "0.000293",
        "GCcontent (%)": "65.2",
        "Number of CDSs": "2634",
        "Average Protein Length": "321.4",
        "Coding Ratio (%)": "74.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "27",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Plasticicumulans lactativorans",
                "strain": "strain=DSM 25287",
                "accession": "GCA_004341245.1",
                "taxid": 1133106,
                "species_taxid": 1133106,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7994,
                "matched_fragments": 61,
                "total_fragments": 916,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Micromonospora veneta",
                "strain": "strain=CAP181",
                "accession": "GCA_016598485.1",
                "taxid": 2796464,
                "species_taxid": 2796464,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.598,
                "matched_fragments": 54,
                "total_fragments": 916,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 76.39,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002722645.1",
                "gtdb_species": "s__UBA890 sp002722645",
                "ani": 77.8307,
                "matched_fragments": 213,
                "total_fragments": 916,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__UBA890;o__UBA890;f__UBA890;g__UBA890",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.90",
                "min_intra_species_ani": "97.61",
                "mean_intra_species_af": "0.78",
                "min_intra_species_af": "0.75",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002731215.1",
                "gtdb_species": "s__UBA890 sp002731215",
                "ani": 77.1713,
                "matched_fragments": 62,
                "total_fragments": 916,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__UBA890;o__UBA890;f__UBA890;g__UBA890",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_012103255.1",
                "gtdb_species": "s__WLXD01 sp012103255",
                "ani": 75.7986,
                "matched_fragments": 68,
                "total_fragments": 916,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__UBA890;o__UBA890;f__WLXD01;g__WLXD01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_003223775.1",
                "gtdb_species": "s__Gp6-AA45 sp003223775",
                "ani": 74.9186,
                "matched_fragments": 61,
                "total_fragments": 916,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__Gp6-AA45",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002198735.1",
                "gtdb_species": "s__Aquabacterium_A sp002198735",
                "ani": 74.9019,
                "matched_fragments": 61,
                "total_fragments": 916,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Aquabacterium_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__UBA890",
        "o__UBA890",
        "f__UBA890",
        "g__UBA890",
        "s__UBA890 sp022563115"
    ],
    "_genome_taxon": [
        "Acidobacteriota",
        "bacterium",
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__UBA890",
        "o__UBA890",
        "f__UBA890",
        "g__UBA890",
        "s__UBA890 sp022563115",
        "Bacteria",
        "Acidobacteriota",
        "UBA890",
        "UBA890",
        "UBA890",
        "UBA890",
        "UBA890",
        "sp022563115"
    ],
    "_meo": [
        {
            "id": "MEO_0000040",
            "label": "marine sediment"
        },
        {
            "id": "MEO_0001378",
            "label": "deep"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}