# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_3	LOCUS_00030	sequence01:2708..2947(+)	internal_stop_codon	3068..3070(+),3134..3136(+),2945..2947(+)		WP_011013856.1	DUF262 domain-containing protein	98.7	9.4	42.3
MGA_4	LOCUS_00040	sequence01:3296..3652(+)	internal_stop_codon	3878..3880(+),3650..3652(+),3134..3136(+),3767..3769(+),3674..3676(+)		WP_011203121.1	DUF262 and DUF1524 domain-containing protein	95.8	17.2	33.6
MGA_6	LOCUS_00060	sequence01:5069..5341(+)	internal_stop_codon	5339..5341(+),5342..5344(+),4988..4990(+)		WP_011202294.1	site-specific DNA-methyltransferase	97.8	15.1	78.4
MGA_7	LOCUS_00070	sequence01:5927..6133(+)	internal_stop_codon	5825..5827(+)		WP_011202294.1	site-specific DNA-methyltransferase	82.4	10.4	59.0
MGA_9	LOCUS_00090	sequence01:8169..8762(+)	internal_stop_codon	8007..8009(+),8760..8762(+),8121..8123(+),7968..7970(+)		WP_011202292.1	DEAD/DEAH box helicase family protein	95.9	21.9	34.0
MGA_10	LOCUS_00100	sequence01:8838..9278(+)	internal_stop_codon	8760..8762(+)		WP_011202292.1	DEAD/DEAH box helicase family protein	98.6	18.7	36.7
MGA_11	LOCUS_00110	sequence01:9567..10094(+)	partial			WP_011202292.1	DEAD/DEAH box helicase family protein	90.3	19.7	33.3
MGA_19	LOCUS_00190	sequence01:18699..18941(-)	internal_stop_codon	19035..19037(-)		WP_011262434.1	translation elongation factor Ts	100.0	27.0	47.5
MGA_22	LOCUS_00220	sequence01:19970..20179(-)	internal_stop_codon	20189..20191(-)		WP_010933441.1	30S ribosomal protein S2	94.2	26.1	41.5
MGA_23	LOCUS_00230	sequence01:20447..20638(-)	internal_stop_codon	20189..20191(-),20447..20449(-)		WP_005645552.1	30S ribosomal protein S2	85.7	21.2	48.1
MGA_24	LOCUS_00240	sequence01:20745..21071(-)	partial			WP_003722395.1	S1 domain-containing post-transcriptional regulator GSP13	70.4	62.4	46.1
MGA_27	LOCUS_00270	sequence01:22610..22759(-)	internal_stop_codon	22967..22969(-),22610..22612(-),22796..22798(-),22961..22963(-),22955..22957(-),22823..22825(-)		WP_011707389.1	type IVa pilus ATPase TapT	100.0	14.2	71.4
MGA_30	LOCUS_00300	sequence01:24405..24830(+)	partial			WP_012545243.1	threonine--tRNA ligase	69.5	15.7	43.9
MGA_31	LOCUS_00310	sequence01:24852..25226(+)	internal_stop_codon	25224..25226(+)		WP_012257081.1	threonine--tRNA ligase	91.1	19.0	48.7
MGA_32	LOCUS_00320	sequence01:25377..25601(+)	internal_stop_codon	25599..25601(+),25224..25226(+)		WP_012289388.1	threonine--tRNA ligase	97.3	11.2	50.0
MGA_33	LOCUS_00330	sequence01:25605..26192(+)	internal_stop_codon	25599..25601(+),26190..26192(+)		WP_007329329.1	threonine--tRNA ligase	100.0	26.1	52.3
MGA_35	LOCUS_00350	sequence01:27693..27977(+)	internal_stop_codon	27666..27668(+),27981..27983(+),27594..27596(+),27675..27677(+),27975..27977(+)		WP_011089442.1	polyhydroxyalkanoate depolymerase	83.0	19.4	44.3
MGA_38	LOCUS_00380	sequence01:29276..29581(+)	internal_stop_codon	29579..29581(+)		WP_003435012.1	chaperonin GroEL	78.2	14.6	67.1
MGA_39	LOCUS_00390	sequence01:29630..30040(+)	internal_stop_codon	30038..30040(+),29579..29581(+),30077..30079(+)		WP_003357641.1	chaperonin GroEL	100.0	25.0	57.4
MGA_40	LOCUS_00400	sequence01:30134..30334(+)	internal_stop_codon	30518..30520(+),30038..30040(+),30512..30514(+),30566..30568(+),30077..30079(+),30395..30397(+),30587..30589(+),30332..30334(+)		WP_003529335.1	chaperonin GroEL	95.5	11.6	66.7
MGA_41	LOCUS_00410	sequence01:30662..30895(+)	internal_stop_codon	30566..30568(+),30518..30520(+),30395..30397(+),30587..30589(+),30512..30514(+)		WP_011964087.1	chaperonin GroEL	98.7	13.5	59.2
MGA_45	LOCUS_00450	sequence01:33983..34192(-)	partial			WP_012258550.1	isoleucine--tRNA ligase	81.2	5.3	46.4
MGA_46	LOCUS_00460	sequence01:34349..34882(-)	internal_stop_codon	34256..34258(-),34349..34351(-),34223..34225(-),35144..35146(-),34274..34276(-),34883..34885(-),35003..35005(-)		WP_011986028.1	isoleucine--tRNA ligase	100.0	17.8	45.4
MGA_47	LOCUS_00470	sequence01:35195..35476(-)	internal_stop_codon	35144..35146(-),35195..35197(-),35513..35515(-)		WP_011068832.1	mupirocin-resistant isoleucine--tRNA ligase	98.9	8.3	63.0
MGA_48	LOCUS_00480	sequence01:35513..35713(-)	internal_stop_codon	35513..35515(-),35783..35785(-)		WP_010882759.1	isoleucine--tRNA ligase	93.9	5.5	53.2
MGA_49	LOCUS_00490	sequence01:35783..36271(-)	internal_stop_codon	36284..36286(-),36548..36550(-),35783..35785(-)		WP_010882759.1	isoleucine--tRNA ligase	92.0	14.2	40.9
MGA_50	LOCUS_00500	sequence01:36284..36472(-)	internal_stop_codon	36284..36286(-),36548..36550(-)		WP_012804609.1	isoleucine--tRNA ligase	93.5	5.4	51.7
MGA_51	LOCUS_00510	sequence01:36548..36841(-)	internal_stop_codon	36905..36907(-),36284..36286(-),36548..36550(-)		WP_002680710.1	isoleucine--tRNA ligase	100.0	8.7	53.6
MGA_55	LOCUS_00550	sequence01:39678..39920(-)	internal_stop_codon	39678..39680(-),40005..40007(-),39663..39665(-),39945..39947(-),40182..40184(-),40050..40052(-),39534..39536(-),40014..40016(-)		WP_011962614.1	threonine ammonia-lyase IlvA	96.2	18.6	49.4
MGA_59	LOCUS_00590	sequence01:46288..46500(-)	internal_stop_codon	46039..46041(-),46180..46182(-),46504..46506(-),46066..46068(-),46288..46290(-)		WP_002837927.1	translation elongation factor 4	100.0	11.7	74.3
MGA_60	LOCUS_00600	sequence01:46504..46737(-)	internal_stop_codon	46504..46506(-),46288..46290(-)		WP_011124574.1	translation elongation factor 4	97.4	13.1	66.2
MGA_64	LOCUS_00640	sequence01:50465..50893(-)	internal_stop_codon	50465..50467(-)		WP_010880277.1	peroxiredoxin	93.0	63.5	45.5
MGA_65	LOCUS_00650	sequence01:51823..52014(-)	internal_stop_codon	52255..52257(-),51784..51786(-),52285..52287(-),51823..51825(-),52129..52131(-),51601..51603(-)		WP_002289722.1	ATP-dependent DNA helicase RecG	100.0	9.4	56.2
MGA_66	LOCUS_00660	sequence01:52699..52977(-)	internal_stop_codon	52624..52626(-),52699..52701(-),52435..52437(-),52411..52413(-)		WP_002289722.1	ATP-dependent DNA helicase RecG	97.8	13.0	36.7
MGA_82	LOCUS_00820	sequence01:66840..67049(+)	internal_stop_codon	67128..67130(+),67107..67109(+),67161..67163(+),67224..67226(+),67227..67229(+),67155..67157(+),67047..67049(+),66816..66818(+)		WP_013383752.1	thioredoxin-disulfide reductase	94.2	21.1	40.9
MGA_85	LOCUS_00850	sequence01:70566..70883(-)	internal_stop_codon	70905..70907(-),71094..71096(-),71136..71138(-)		WP_002362075.1	tRNA 2-thiouridine(34) synthase MnmA	36.2	10.2	60.5
MGA_89	LOCUS_00890	sequence01:72884..73021(-)	internal_stop_codon	73157..73159(-),73088..73090(-),73064..73066(-),72884..72886(-)		WP_236615777.1	RecQ family ATP-dependent DNA helicase	100.0	4.6	73.3
MGA_90	LOCUS_00900	sequence01:73385..73675(-)	internal_stop_codon	73385..73387(-),73157..73159(-),73754..73756(-),73841..73843(-),73361..73363(-),73724..73726(-),73367..73369(-)		WP_011082627.1	DNA helicase RecQ	91.7	14.8	54.5
MGA_91	LOCUS_00910	sequence01:74358..74579(-)	internal_stop_codon	74331..74333(-),74865..74867(-),74616..74618(-),74292..74294(-),74103..74105(-),74358..74360(-),74652..74654(-)		WP_002858322.1	invasion protein CiaB	97.3	11.6	43.7
MGA_100	LOCUS_01000	sequence01:77283..77921(-)	internal_stop_codon	78174..78176(-),77283..77285(-),77109..77111(-),77931..77933(-)		WP_011015951.1	DEAD/DEAH box helicase	100.0	40.0	58.5
MGA_101	LOCUS_01010	sequence01:77931..78092(-)	internal_stop_codon	78174..78176(-),77931..77933(-)		WP_001178942.1	DEAD/DEAH box helicase	100.0	10.7	48.1
MGA_103	LOCUS_01030	sequence01:79140..79319(+)	internal_stop_codon	79518..79520(+),79089..79091(+),79485..79487(+),79317..79319(+)		WP_003234625.1	zinc metallochaperone ZinU	100.0	14.9	67.8
MGA_104	LOCUS_01040	sequence01:79647..79907(+)	internal_stop_codon	79641..79643(+),79518..79520(+),79485..79487(+),79905..79907(+),80130..80132(+),79959..79961(+)		WP_001062984.1	GTP-binding protein	89.5	19.2	62.3
MGA_106	LOCUS_01060	sequence02:847..1047(-)	internal_stop_codon	1078..1080(-),1120..1122(-),1276..1278(-),1165..1167(-),1213..1215(-)		WP_011101345.1	methionine adenosyltransferase	86.4	14.9	54.2
MGA_107	LOCUS_01070	sequence02:1348..1584(-)	internal_stop_codon	1825..1827(-),1348..1350(-),1120..1122(-),1078..1080(-),1654..1656(-),1165..1167(-),1612..1614(-),1276..1278(-),1213..1215(-),1642..1644(-),1633..1635(-)		WP_003900333.1	methionine adenosyltransferase	94.9	18.4	56.8
MGA_110	LOCUS_01100	sequence02:6117..6278(+)	internal_stop_codon	6465..6467(+),6276..6278(+)		WP_001290916.1	rhodanese-related sulfurtransferase	92.5	14.9	46.9
MGA_112	LOCUS_01120	sequence02:6711..6890(+)	internal_stop_codon	6651..6653(+),6681..6683(+),6888..6890(+)		WP_010883372.1	rhodanese-related sulfurtransferase	98.3	18.2	40.7
MGA_114	LOCUS_01140	sequence02:7638..7973(+)	internal_stop_codon	7614..7616(+)		WP_008760845.1	nucleoside-diphosphate kinase	100.0	72.1	45.9
MGA_116	LOCUS_01160	sequence02:9861..10115(+)	internal_stop_codon	9639..9641(+),9837..9839(+),9783..9785(+)		WP_009896068.1	DNA polymerase I	98.8	9.3	45.8
MGA_119	LOCUS_01190	sequence02:13784..13990(+)	internal_stop_codon	13988..13990(+)		WP_004080813.1	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB	94.1	14.7	50.0
MGA_123	LOCUS_01230	sequence02:21326..21502(-)	internal_stop_codon	21116..21118(-),21326..21328(-),21311..21313(-),21131..21133(-),21287..21289(-),21260..21262(-),21575..21577(-)		WP_010966475.1	tRNA dihydrouridine synthase DusB	100.0	18.4	44.1
MGA_125	LOCUS_01250	sequence02:30434..30598(-)	internal_stop_codon	30698..30700(-),30602..30604(-),30623..30625(-),30710..30712(-)		WP_010896116.1	prolipoprotein diacylglyceryl transferase	98.1	18.9	60.4
MGA_129	LOCUS_01290	sequence02:37564..38052(+)	internal_stop_codon	38074..38076(+),37549..37551(+),38098..38100(+),38050..38052(+),37462..37464(+),38143..38145(+)		WP_010965118.1	DNA translocase FtsK	98.8	21.2	63.8
MGA_131	LOCUS_01310	sequence02:40845..41006(+)	internal_stop_codon	40725..40727(+),40830..40832(+)		WP_162303134.1	RhuM family protein	88.7	10.0	72.3
MGA_137	LOCUS_01370	sequence02:48158..48508(+)	internal_stop_codon	48050..48052(+),47978..47980(+),47924..47926(+),48017..48019(+),48023..48025(+),48725..48727(+),48506..48508(+)		WP_002455927.1	chromosomal replication initiator protein DnaA	99.1	25.5	56.5
MGA_144	LOCUS_01440	sequence02:52355..52606(-)	internal_stop_codon	52355..52357(-)		WP_011228247.1	M50 family metallopeptidase	65.1	16.1	57.4
MGA_150	LOCUS_01500	sequence02:58848..59204(+)	internal_stop_codon	59256..59258(+),59202..59204(+),58821..58823(+),59277..59279(+),58632..58634(+),59367..59369(+),58746..58748(+)		WP_010989487.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	100.0	32.2	49.2
MGA_154	LOCUS_01540	sequence02:61205..61510(+)	frameshift,internal_stop_codon	61551..61553(+),61242..61244(+),61518..61520(+),61536..61538(+),61587..61589(+),61509..61511(+)	61271	WP_011250006.1	peroxiredoxin	72.3	47.4	56.2
MGA_162	LOCUS_01620	sequence02:72831..73019(+)	internal_stop_codon	73140..73142(+),73017..73019(+),73281..73283(+),73224..73226(+),73278..73280(+),73296..73298(+)		WP_002220670.1	superoxide dismutase	100.0	31.8	69.4
MGA_172	LOCUS_01720	sequence03:2004..2165(-)	internal_stop_codon	2178..2180(-),2358..2360(-),2004..2006(-),2385..2387(-),1983..1985(-),2319..2321(-),1929..1931(-)		WP_013389776.1	excinuclease ABC subunit UvrB	98.1	7.4	69.2
MGA_173	LOCUS_01730	sequence03:2385..2552(-)	internal_stop_codon	2178..2180(-),2358..2360(-),2619..2621(-),2385..2387(-),2586..2588(-),2319..2321(-),2742..2744(-)		WP_002210767.1	excinuclease ABC subunit UvrB	100.0	8.2	76.4
MGA_174	LOCUS_01740	sequence03:2742..3071(-)	internal_stop_codon	3081..3083(-),2619..2621(-),2586..2588(-),2742..2744(-)		WP_012256952.1	excinuclease ABC subunit UvrB	97.2	16.0	46.2
MGA_175	LOCUS_01750	sequence03:3081..3428(-)	internal_stop_codon	3081..3083(-),3480..3482(-),3528..3530(-)		WP_010963824.1	excinuclease ABC subunit UvrB	99.1	17.1	69.3
MGA_181	LOCUS_01810	sequence03:7289..7609(-)	internal_stop_codon	7679..7681(-),7289..7291(-),7082..7084(-),7133..7135(-),7658..7660(-)		WP_201627741.1	Na/Pi cotransporter family protein	100.0	18.9	28.0
MGA_183	LOCUS_01830	sequence03:11017..11220(+)	internal_stop_codon	11218..11220(+),11344..11346(+)		WP_011389973.1	glycosyltransferase family 2 protein	100.0	19.7	55.2
MGA_184	LOCUS_01840	sequence03:11362..11754(+)	internal_stop_codon	11836..11838(+),11752..11754(+),11761..11763(+),11344..11346(+),11809..11811(+),11218..11220(+)		WP_012257444.1	glycosyltransferase family 2 protein	98.5	36.8	50.0
MGA_186	LOCUS_01860	sequence03:12979..13149(-)	internal_stop_codon	13234..13236(-),13252..13254(-),13243..13245(-),12979..12981(-),13177..13179(-)		WP_013531575.1	methionine--tRNA ligase	100.0	10.9	46.4
MGA_187	LOCUS_01870	sequence03:13873..14049(-)	internal_stop_codon	14098..14100(-),13873..13875(-),13591..13593(-),13846..13848(-)		WP_011391596.1	methionine--tRNA ligase	96.6	8.6	44.6
MGA_189	LOCUS_01890	sequence03:15917..16120(-)	internal_stop_codon	16196..16198(-),16154..16156(-),16169..16171(-)		WP_004555861.1	M48 family metallopeptidase	95.5	15.3	45.3
MGA_190	LOCUS_01900	sequence03:16478..16822(-)	internal_stop_codon	16907..16909(-),16898..16900(-),16478..16480(-)		WP_011403427.1	M48 family metallopeptidase	96.5	26.3	47.3
MGA_196	LOCUS_01960	sequence03:21759..22037(-)	internal_stop_codon	21612..21614(-),22146..22148(-),21759..21761(-),22182..22184(-),22062..22064(-),21564..21566(-),22254..22256(-),22245..22247(-)		WP_000939433.1	N-6 DNA methylase	100.0	18.0	50.0
MGA_197	LOCUS_01970	sequence03:22254..22418(-)	internal_stop_codon	22062..22064(-),22425..22427(-),22182..22184(-),22146..22148(-),22254..22256(-),22245..22247(-)		WP_005480516.1	N-6 DNA methylase	100.0	10.7	70.4
MGA_198	LOCUS_01980	sequence03:22425..22691(-)	internal_stop_codon	22425..22427(-),22182..22184(-),22146..22148(-),22254..22256(-),22245..22247(-)		WP_005480516.1	N-6 DNA methylase	90.9	16.1	62.5
MGA_199	LOCUS_01990	sequence03:22773..22931(-)	internal_stop_codon	23100..23102(-),22980..22982(-)		WP_010941424.1	ATP-dependent RecD-like DNA helicase	98.1	5.6	52.9
MGA_200	LOCUS_02000	sequence03:23367..23516(-)	internal_stop_codon	23634..23636(-),23286..23288(-),23367..23369(-),23307..23309(-),23223..23225(-)		WP_010941424.1	ATP-dependent RecD-like DNA helicase	100.0	5.6	54.9
MGA_201	LOCUS_02010	sequence03:23634..23891(-)	internal_stop_codon	23904..23906(-),23634..23636(-),23367..23369(-),24030..24032(-),24039..24041(-),23898..23900(-)		WP_010941424.1	ATP-dependent RecD-like DNA helicase	98.8	9.4	44.7
MGA_203	LOCUS_02030	sequence03:24513..25178(-)	internal_stop_codon	25398..25400(-),24387..24389(-),24342..24344(-),24513..24515(-)		WP_010941424.1	ATP-dependent RecD-like DNA helicase	100.0	24.5	35.1
MGA_204	LOCUS_02040	sequence03:27388..27657(-)	internal_stop_codon	27805..27807(-),27790..27792(-),27169..27171(-),27388..27390(-),27709..27711(-),27316..27318(-),27136..27138(-),27358..27360(-)		WP_012027389.1	DEAD/DEAH box helicase family protein	79.8	8.5	56.3
MGA_205	LOCUS_02050	sequence03:28180..28323(-)	internal_stop_codon	28381..28383(-),28180..28182(-),28084..28086(-),28147..28149(-)		WP_000819022.1	DEAD/DEAH box helicase family protein	100.0	5.8	80.9
MGA_206	LOCUS_02060	sequence03:28381..28608(-)	internal_stop_codon	28381..28383(-),28180..28182(-),28861..28863(-),28147..28149(-),28828..28830(-),28630..28632(-)		WP_011105653.1	DEAD/DEAH box helicase family protein	100.0	9.2	77.3
MGA_207	LOCUS_02070	sequence03:28936..29181(-)	internal_stop_codon	28936..28938(-),28861..28863(-),28828..28830(-)		WP_011105653.1	DEAD/DEAH box helicase family protein	100.0	10.0	44.4
MGA_208	LOCUS_02080	sequence03:29319..29804(-)	internal_stop_codon	29925..29927(-),30036..30038(-),29319..29321(-),29313..29315(-),29922..29924(-)		WP_009872163.1	cysteine--tRNA ligase	99.4	33.2	25.9
MGA_209	LOCUS_02090	sequence03:30036..30365(-)	internal_stop_codon	29925..29927(-),30393..30395(-),30036..30038(-),29922..29924(-),30543..30545(-)		WP_010883567.1	cysteine--tRNA ligase	99.1	18.4	42.2
MGA_213	LOCUS_02130	sequence03:36476..36640(+)	internal_stop_codon	36731..36733(+),36638..36640(+)		WP_011391531.1	30S ribosomal protein S15	100.0	60.7	63.0
MGA_220	LOCUS_02200	sequence03:46223..46468(-)	internal_stop_codon	46694..46696(-),46223..46225(-),45974..45976(-),46625..46627(-),46514..46516(-)		WP_003313612.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	96.3	16.2	48.7
MGA_221	LOCUS_02210	sequence04:3144..3452(-)	internal_stop_codon	3513..3515(-),3726..3728(-),3582..3584(-),3588..3590(-)		WP_005786517.1	DEAD/DEAH box helicase	98.0	23.0	49.0
MGA_222	LOCUS_02220	sequence04:3726..3977(-)	internal_stop_codon	3582..3584(-),3588..3590(-),3513..3515(-),4020..4022(-),4086..4088(-),3726..3728(-),4194..4196(-)		WP_011948368.1	DEAD/DEAH box helicase	98.8	19.3	63.4
MGA_230	LOCUS_02300	sequence04:10480..10716(-)	internal_stop_codon	10738..10740(-),10357..10359(-),10315..10317(-),10870..10872(-),10813..10815(-),10771..10773(-),10480..10482(-),10753..10755(-),10912..10914(-),10252..10254(-)		WP_011056402.1	type IV pilus twitching motility protein PilT	100.0	17.5	67.9
MGA_236	LOCUS_02360	sequence04:13958..14107(+)	internal_stop_codon	13913..13915(+),14306..14308(+),14120..14122(+),14105..14107(+),14273..14275(+),13727..13729(+)		WP_011101237.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	81.6	8.1	60.0
MGA_237	LOCUS_02370	sequence04:14351..14512(+)	internal_stop_codon	14306..14308(+),14510..14512(+),14591..14593(+),14765..14767(+),14558..14560(+),14549..14551(+),14273..14275(+)		WP_000766307.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	92.5	10.0	49.0
MGA_239	LOCUS_02390	sequence04:15694..15903(+)	internal_stop_codon	15634..15636(+),15616..15618(+),16138..16140(+),15901..15903(+)		WP_011056974.1	DNA polymerase III subunit gamma/tau	89.9	10.3	66.1
MGA_240	LOCUS_02400	sequence04:17974..18141(-)	internal_stop_codon	18169..18171(-)		WP_002289402.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	98.2	27.4	57.4
MGA_241	LOCUS_02410	sequence04:18169..18594(-)	internal_stop_codon	18169..18171(-)		WP_004081059.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	93.6	65.0	62.9
MGA_243	LOCUS_02430	sequence04:19638..20201(+)	internal_stop_codon	19434..19436(+),19617..19619(+),19584..19586(+),19455..19457(+),19386..19388(+),20199..20201(+),20244..20246(+)		WP_003356788.1	glutamate--tRNA ligase	100.0	35.9	36.3
MGA_245	LOCUS_02450	sequence04:21666..21899(+)	internal_stop_codon	21987..21989(+),21660..21662(+),21897..21899(+),21918..21920(+)		WP_005903983.1	ArsB/NhaD family transporter	100.0	18.2	42.9
MGA_249	LOCUS_02490	sequence04:25810..26064(+)	internal_stop_codon	26200..26202(+),26293..26295(+),26062..26064(+),25789..25791(+)		WP_120701253.1	ATP-dependent DNA helicase	98.8	6.2	43.4
MGA_252	LOCUS_02520	sequence04:28902..29564(+)	internal_stop_codon	28665..28667(+),28689..28691(+),28767..28769(+),29562..29564(+),29583..29585(+)		WP_002163769.1	DNA helicase PcrA	98.6	25.9	49.1
MGA_263	LOCUS_02630	sequence04:40063..40533(+)	internal_stop_codon	39874..39876(+),39826..39828(+),40006..40008(+),40048..40050(+)		WP_002852184.1	polyphosphate kinase 2	94.9	50.5	45.9
MGA_264	LOCUS_02640	sequence04:41340..41720(-)	internal_stop_codon	41781..41783(-),41745..41747(-)		WP_010903975.1	UDP-N-acetyl glucosamine 2-epimerase	91.3	26.0	36.1
MGA_266	LOCUS_02660	sequence04:42087..42686(-)	internal_stop_codon	42069..42071(-),42087..42089(-),42018..42020(-)		WP_010903975.1	UDP-N-acetyl glucosamine 2-epimerase	87.4	35.9	31.8
MGA_269	LOCUS_02690	sequence05:2188..2415(-)	internal_stop_codon	2425..2427(-),2677..2679(-),2443..2445(-),2656..2658(-),2188..2190(-)		WP_003438014.1	ABC transporter ATP-binding protein	97.3	12.9	64.4
MGA_272	LOCUS_02720	sequence05:4792..4932(-)	internal_stop_codon	4789..4791(-),4792..4794(-),4975..4977(-),4783..4785(-),4777..4779(-)		WP_010940692.1	DnaJ C-terminal domain-containing protein	91.3	14.3	64.3
MGA_273	LOCUS_02730	sequence05:5620..5919(+)	internal_stop_codon	5938..5940(+),5983..5985(+),5965..5967(+),6037..6039(+),5917..5919(+),5575..5577(+)		WP_011674553.1	primosomal protein N'	97.0	12.2	41.8
MGA_276	LOCUS_02760	sequence05:9636..9986(-)	internal_stop_codon	9378..9380(-),9369..9371(-),9630..9632(-),9435..9437(-),9414..9416(-),10254..10256(-),9567..9569(-),10161..10163(-),9636..9638(-),9540..9542(-)		WP_003101357.1	acetolactate synthase large subunit	95.7	19.9	43.2
MGA_277	LOCUS_02770	sequence05:10293..10646(-)	internal_stop_codon	10254..10256(-),10656..10658(-),10161..10163(-),10293..10295(-),10773..10775(-),10806..10808(-)		WP_010940550.1	acetolactate synthase large subunit	76.9	16.5	64.4
MGA_280	LOCUS_02800	sequence05:13373..13657(-)	internal_stop_codon	13373..13375(-),13256..13258(-),13304..13306(-)		WP_012258365.1	response regulator transcription factor	95.7	40.0	50.0
MGA_283	LOCUS_02830	sequence05:15381..15578(-)	internal_stop_codon	15825..15827(-),15678..15680(-),15663..15665(-),15381..15383(-),15612..15614(-),15726..15728(-),15747..15749(-),15798..15800(-)		WP_012257936.1	Glu/Leu/Phe/Val dehydrogenase	87.7	13.3	61.4
MGA_284	LOCUS_02840	sequence05:16167..16388(-)	internal_stop_codon	16023..16025(-),15882..15884(-),16167..16169(-),16059..16061(-)		WP_002225092.1	Glu/Leu/Phe/Val dehydrogenase	93.2	15.4	54.4
MGA_285	LOCUS_02850	sequence05:19048..19287(-)	internal_stop_codon	18961..18963(-),19048..19050(-),18928..18930(-),18913..18915(-),19375..19377(-),18946..18948(-),18790..18792(-),19441..19443(-)		WP_011948032.1	ribonuclease R	97.5	10.8	64.1
MGA_286	LOCUS_02860	sequence05:19441..19797(-)	internal_stop_codon	19441..19443(-),19375..19377(-)		WP_011948032.1	ribonuclease R	76.3	12.7	32.6
MGA_290	LOCUS_02900	sequence05:23468..23797(+)	internal_stop_codon	23996..23998(+),23432..23434(+),23795..23797(+),23420..23422(+)		WP_011964169.1	NAD(+) synthase	99.1	40.3	44.4
MGA_293	LOCUS_02930	sequence05:28613..28972(+)	internal_stop_codon	28457..28459(+),28466..28468(+),28553..28555(+),28373..28375(+),28499..28501(+),28484..28486(+)		WP_003549080.1	DNA repair protein RadA	79.8	21.0	43.8
MGA_307	LOCUS_03060	sequence06:6126..6284(+)	frameshift,internal_stop_codon	6114..6116(+),6012..6014(+),6282..6284(+),6349..6351(+),6463..6465(+),5985..5987(+),6388..6390(+),6490..6492(+),6526..6528(+)	6369,6293	WP_011021199.1	glycosyltransferase	96.2	14.0	48.0
MGA_319	LOCUS_03180	sequence06:23998..24303(+)	internal_stop_codon	24301..24303(+)		WP_012546240.1	ATP-binding protein	93.1	10.6	43.6
MGA_320	LOCUS_03190	sequence06:24316..24642(+)	internal_stop_codon	24640..24642(+),24301..24303(+)		WP_120647683.1	ATP-binding protein	81.5	8.3	45.5
MGA_325	LOCUS_03240	sequence06:30809..30985(+)	internal_stop_codon	30782..30784(+),31010..31012(+),30983..30985(+)		WP_002289105.1	aspartate--tRNA ligase	100.0	9.8	63.8
MGA_326	LOCUS_03250	sequence06:31355..31564(+)	internal_stop_codon	31562..31564(+),31304..31306(+),31769..31771(+),31658..31660(+)		WP_004599762.1	aspartate--tRNA ligase	92.8	10.6	59.4
MGA_327	LOCUS_03260	sequence06:32033..32551(+)	internal_stop_codon	32003..32005(+),31880..31882(+)		WP_027038352.1	aspartate--tRNA ligase	97.7	28.2	51.2
MGA_329	LOCUS_03280	sequence06:35969..36622(+)	internal_stop_codon	36620..36622(+),36896..36898(+),36653..36655(+)		WP_010881253.1	ribosome biogenesis GTPase Der	93.1	45.0	38.8
MGA_334	LOCUS_03330	sequence07:1..584(+)	internal_stop_codon	582..584(+),786..788(+),873..875(+)		WP_011183367.1	translational GTPase TypA	96.4	30.6	50.8
MGA_335	LOCUS_03340	sequence07:645..788(+)	internal_stop_codon	582..584(+),786..788(+),873..875(+)		WP_010964991.1	translational GTPase TypA	100.0	7.8	61.7
MGA_336	LOCUS_03350	sequence07:1125..1334(+)	internal_stop_codon	1095..1097(+),873..875(+)		WP_013384255.1	translational GTPase TypA	95.7	10.9	68.2
MGA_338	LOCUS_03370	sequence07:2600..2887(-)	internal_stop_codon	2600..2602(-),2999..3001(-),2444..2446(-),2957..2959(-),3023..3025(-),2366..2368(-),2519..2521(-),3086..3088(-),2453..2455(-)		WP_010946697.1	DNA polymerase III subunit alpha	100.0	8.3	48.4
MGA_339	LOCUS_03380	sequence07:3086..3334(-)	internal_stop_codon	2999..3001(-),3086..3088(-),3440..3442(-),2957..2959(-),3359..3361(-),3023..3025(-)		WP_011108183.1	DNA polymerase III subunit alpha	67.1	4.3	54.5
MGA_340	LOCUS_03390	sequence07:3440..3724(-)	internal_stop_codon	3836..3838(-),3794..3796(-),3440..3442(-),3359..3361(-),3824..3826(-)		WP_011119187.1	DNA polymerase III subunit alpha	100.0	7.8	45.7
MGA_341	LOCUS_03400	sequence07:3836..4066(-)	internal_stop_codon	4166..4168(-),3836..3838(-),4097..4099(-),3824..3826(-),4085..4087(-),4091..4093(-),4073..4075(-),3794..3796(-)		WP_011393372.1	DNA polymerase III subunit alpha	100.0	6.6	69.7
MGA_342	LOCUS_03410	sequence07:4607..4921(-)	internal_stop_codon	5087..5089(-),4931..4933(-),4607..4609(-)		WP_013582833.1	DNA polymerase III subunit alpha	91.3	7.9	35.8
MGA_349	LOCUS_03470	sequence07:17645..17827(-)	internal_stop_codon	17978..17980(-)		WP_011070427.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	100.0	7.5	63.3
MGA_350	LOCUS_03480	sequence07:18158..18346(-)	internal_stop_codon	18506..18508(-),18122..18124(-),18593..18595(-),18158..18160(-),17978..17980(-),18110..18112(-)		WP_000076460.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	95.2	9.2	84.7
MGA_351	LOCUS_03490	sequence07:18593..18829(-)	internal_stop_codon	19070..19072(-),18506..18508(-),18593..18595(-),19100..19102(-),18911..18913(-)		WP_000435993.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	97.4	11.9	65.8
MGA_352	LOCUS_03500	sequence07:20446..20673(-)	internal_stop_codon	20416..20418(-),20446..20448(-)		WP_010969598.1	adenylate cyclase CyaD2	98.7	10.2	33.8
MGA_356	LOCUS_03540	sequence07:24983..25183(-)	internal_stop_codon	25193..25195(-),25205..25207(-)		WP_011390499.1	30S ribosomal protein S10	97.0	62.7	56.2
MGA_366	LOCUS_03630	sequence08:1274..1489(+)	internal_stop_codon	1022..1024(+),1061..1063(+),1241..1243(+),1223..1225(+),1487..1489(+)		WP_011405016.1	response regulator transcription factor	94.4	28.0	44.8
MGA_370	LOCUS_03670	sequence08:2580..2894(+)	internal_stop_codon	2937..2939(+),2892..2894(+)		WP_011338938.1	fasciclin domain-containing protein	92.3	61.5	52.1
MGA_379	LOCUS_03760	sequence08:10593..10862(-)	internal_stop_codon	10377..10379(-),10359..10361(-),10902..10904(-),10572..10574(-),10593..10595(-),10539..10541(-),11022..11024(-)		WP_010868451.1	serine--tRNA ligase	74.2	14.7	38.8
MGA_380	LOCUS_03770	sequence08:11407..11610(-)	internal_stop_codon	11650..11652(-)		WP_010358325.1	SsrA-binding protein SmpB	83.6	37.8	46.4
MGA_381	LOCUS_03780	sequence08:11650..11856(-)	internal_stop_codon	11650..11652(-)		WP_000766480.1	SsrA-binding protein	88.2	39.5	58.3
MGA_387	LOCUS_03840	sequence08:16273..16755(+)	internal_stop_codon	16753..16755(+),16780..16782(+)		WP_005811460.1	NYN domain-containing protein	89.4	56.5	65.0
MGA_388	LOCUS_03850	sequence08:16786..17040(+)	internal_stop_codon	16753..16755(+),16780..16782(+)		WP_005811460.1	NYN domain-containing protein	78.6	26.1	48.5
MGA_394	LOCUS_03910	sequence08:20711..21349(+)	frameshift,internal_stop_codon	20588..20590(+),20687..20689(+)	20680,20699	WP_011016207.1	ankyrin repeat domain-containing protein	96.7	52.5	32.5
MGA_395	LOCUS_03920	sequence08:21820..22155(-)	internal_stop_codon	22333..22335(-),21820..21822(-),22165..22167(-),21727..21729(-),21766..21768(-)		WP_003691202.1	Holliday junction branch migration DNA helicase RuvB	97.3	30.3	47.2
MGA_396	LOCUS_03930	sequence08:22333..22620(-)	internal_stop_codon	22165..22167(-),22333..22335(-)		WP_002220958.1	Holliday junction branch migration DNA helicase RuvB	93.7	25.9	43.8
MGA_397	LOCUS_03940	sequence08:22814..23119(+)	partial			WP_011073744.1	single-stranded DNA-binding protein	96.0	40.8	55.7
MGA_401	LOCUS_03980	sequence08:26102..26371(-)	internal_stop_codon	26375..26377(-),26102..26104(-),26462..26464(-)		WP_008765067.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	96.6	14.2	41.4
MGA_403	LOCUS_04000	sequence08:27404..27625(-)	internal_stop_codon	27806..27808(-),27674..27676(-),27191..27193(-),27404..27406(-),27323..27325(-),27776..27778(-),27341..27343(-),27830..27832(-),27659..27661(-)		WP_011016400.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	97.3	11.9	52.8
MGA_406	LOCUS_04030	sequence08:29407..30099(-)	internal_stop_codon	29407..29409(-),30280..30282(-),30253..30255(-),30118..30120(-),30175..30177(-)		WP_010938076.1	F0F1 ATP synthase subunit beta	100.0	48.9	80.0
MGA_407	LOCUS_04040	sequence08:30280..30543(-)	internal_stop_codon	30610..30612(-),30280..30282(-),30700..30702(-),30568..30570(-),30253..30255(-),30118..30120(-),30175..30177(-)		WP_011016335.1	F0F1 ATP synthase subunit beta	100.0	18.8	62.1
MGA_408	LOCUS_04050	sequence08:30742..30930(-)	internal_stop_codon	31093..31095(-),31054..31056(-)		WP_013223079.1	bifunctional RNase H/acid phosphatase	95.2	14.9	55.0
MGA_410	LOCUS_04070	sequence08:31624..32277(-)	internal_stop_codon	32344..32346(-),31624..31626(-)		WP_011964544.1	ATP synthase F1 subunit gamma	98.6	68.9	36.4
MGA_411	LOCUS_04080	sequence08:32344..32505(-)	internal_stop_codon	32344..32346(-)		WP_000002194.1	ATP synthase F1 subunit gamma	100.0	17.6	43.4
MGA_412	LOCUS_04090	sequence08:32511..32900(-)	internal_stop_codon	32910..32912(-)		WP_000080506.1	F0F1 ATP synthase subunit alpha	99.2	25.6	51.2
MGA_413	LOCUS_04100	sequence08:32910..33362(-)	internal_stop_codon	33417..33419(-),32910..32912(-)		WP_002851836.1	F0F1 ATP synthase subunit alpha	100.0	29.9	84.0
MGA_415	LOCUS_04110	sequence09:297..503(+)	internal_stop_codon	771..773(+),165..167(+),258..260(+),558..560(+),696..698(+),273..275(+),267..269(+),576..578(+),501..503(+)		WP_112130572.1	ATP-dependent chaperone ClpB	100.0	7.9	60.3
MGA_416	LOCUS_04120	sequence09:849..1226(+)	internal_stop_codon	771..773(+),558..560(+),1419..1421(+),576..578(+),696..698(+),1410..1412(+),1224..1226(+)		WP_002288348.1	ATP-dependent chaperone ClpB	99.2	15.0	30.8
MGA_417	LOCUS_04130	sequence09:1689..1937(+)	internal_stop_codon	1617..1619(+),1419..1421(+),1545..1547(+),1935..1937(+),1410..1412(+)		WP_011125234.1	ATP-dependent chaperone ClpB	95.1	9.0	34.6
MGA_421	LOCUS_04170	sequence09:8908..9039(-)	internal_stop_codon	8908..8910(-),8719..8721(-),8776..8778(-),8836..8838(-)		WP_011123088.1	tRNA-binding protein	100.0	38.4	65.1
MGA_422	LOCUS_04180	sequence09:9763..9984(-)	internal_stop_codon	10147..10149(-),10027..10029(-),9496..9498(-),10267..10269(-),9763..9765(-),9577..9579(-),10045..10047(-),10030..10032(-),10252..10254(-)		WP_027480146.1	ATP-dependent zinc metalloprotease FtsH	98.6	11.5	56.9
MGA_426	LOCUS_04220	sequence09:12317..12571(+)	internal_stop_codon	12164..12166(+),12254..12256(+),12173..12175(+),12569..12571(+)		WP_001830004.1	ABC-F family ATP-binding cassette domain-containing protein	88.1	11.5	43.2
MGA_429	LOCUS_04250	sequence09:13627..14007(-)	internal_stop_codon	14023..14025(-),14074..14076(-),13627..13629(-)		WP_010939535.1	RlmE family RNA methyltransferase	100.0	52.5	31.5
MGA_432	LOCUS_04280	sequence09:16728..16883(-)	internal_stop_codon	16692..16694(-),16944..16946(-),16932..16934(-),16728..16730(-)		WP_011070719.1	calcium/sodium antiporter	100.0	16.1	74.5
MGA_439	LOCUS_04350	sequence09:23752..23910(-)	internal_stop_codon	23989..23991(-),23527..23529(-),23752..23754(-)		WP_012545963.1	NAD-dependent DNA ligase LigA	100.0	7.2	51.9
MGA_450	LOCUS_04450	sequence10:924..1100(-)	internal_stop_codon	1323..1325(-),861..863(-),885..887(-),906..908(-),1275..1277(-),771..773(-),711..713(-),924..926(-),1143..1145(-),1344..1346(-),1170..1172(-),1239..1241(-),1182..1184(-)		WP_011462189.1	excinuclease ABC subunit UvrA	96.6	6.0	75.0
MGA_452	LOCUS_04470	sequence10:5326..5574(-)	internal_stop_codon	5230..5232(-),5134..5136(-),5326..5328(-),5260..5262(-)		WP_012584075.1	hypothetical protein	97.6	25.1	43.8
MGA_457	LOCUS_04520	sequence10:10602..10844(+)	internal_stop_codon	10875..10877(+),10920..10922(+),11103..11105(+),10842..10844(+),10935..10937(+)		WP_010942252.1	serine hydroxymethyltransferase	100.0	19.3	68.8
MGA_461	LOCUS_04560	sequence10:17334..17492(+)	internal_stop_codon	17688..17690(+),17517..17519(+),17490..17492(+),17289..17291(+),17307..17309(+)		WP_011015672.1	elongation factor G	100.0	7.5	90.4
MGA_462	LOCUS_04570	sequence10:17730..17918(+)	internal_stop_codon	17688..17690(+),17916..17918(+),18162..18164(+),17928..17930(+),17490..17492(+),18123..18125(+),18048..18050(+),17517..17519(+),18207..18209(+)		WP_011183519.1	elongation factor G	100.0	9.0	48.4
MGA_463	LOCUS_04580	sequence10:18267..18701(+)	internal_stop_codon	18162..18164(+),18717..18719(+),18891..18893(+),18123..18125(+),18699..18701(+),18816..18818(+),18048..18050(+),18207..18209(+)		WP_002212325.1	elongation factor G	100.0	20.5	73.6
MGA_464	LOCUS_04590	sequence10:18900..19127(+)	internal_stop_codon	18891..18893(+),18717..18719(+),18816..18818(+),19125..19127(+),18699..18701(+)		WP_011393940.1	elongation factor G	100.0	10.8	68.0
MGA_465	LOCUS_04600	sequence10:19137..19322(+)	internal_stop_codon	18891..18893(+),19125..19127(+)		WP_000101814.1	elongation factor G	83.6	7.4	64.7
MGA_467	LOCUS_04620	sequence10:20650..20775(+)	internal_stop_codon	21058..21060(+),20920..20922(+),20773..20775(+),20950..20952(+),20434..20436(+),20602..20604(+),20614..20616(+),20641..20643(+)		WP_012310845.1	ribonuclease Y	100.0	8.1	61.0
MGA_472	LOCUS_04670	sequence10:25396..25905(-)	internal_stop_codon	25396..25398(-),25945..25947(-),25906..25908(-),25957..25959(-)		WP_011836596.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	99.4	34.2	53.0
MGA_473	LOCUS_04680	sequence10:25957..26181(-)	internal_stop_codon	25945..25947(-),26239..26241(-),25906..25908(-),25957..25959(-)		WP_011390924.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	77.0	11.4	56.1
MGA_474	LOCUS_04690	sequence10:26239..26451(-)	internal_stop_codon	26239..26241(-)		WP_164920797.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	80.0	11.6	64.3
MGA_477	LOCUS_04720	sequence11:218..583(-)	internal_stop_codon	842..844(-),866..868(-),704..706(-)		WP_009902393.1	YifB family Mg chelatase-like AAA ATPase	97.5	21.8	42.4
MGA_478	LOCUS_04730	sequence11:2090..2389(-)	internal_stop_codon	2651..2653(-),2471..2473(-),2435..2437(-),1922..1924(-),2594..2596(-),2090..2092(-),2063..2065(-)		WP_013222619.1	preprotein translocase subunit SecY	99.0	21.8	41.8
MGA_481	LOCUS_04760	sequence11:4358..4537(-)	internal_stop_codon	4358..4360(-),4208..4210(-),4301..4303(-)		WP_010938614.1	50S ribosomal protein L18	93.2	46.2	50.9
MGA_482	LOCUS_04770	sequence11:5306..5554(-)	internal_stop_codon	5213..5215(-),5186..5188(-),5225..5227(-),5306..5308(-),5252..5254(-)		WP_005904135.1	30S ribosomal protein S8	98.8	61.4	40.7
MGA_485	LOCUS_04800	sequence11:8053..8658(-)	partial			WP_004185240.1	30S ribosomal protein S3	94.0	71.1	45.0
MGA_488	LOCUS_04830	sequence11:9810..10259(-)	internal_stop_codon	9750..9752(-),9546..9548(-),9591..9593(-),9555..9557(-),9810..9812(-)		WP_011393934.1	50S ribosomal protein L2	98.7	52.9	59.2
MGA_490	LOCUS_04850	sequence11:10600..10923(-)	internal_stop_codon	10966..10968(-)		WP_003129968.1	50S ribosomal protein L4	93.5	48.6	28.7
MGA_491	LOCUS_04860	sequence11:10966..11223(-)	internal_stop_codon	10966..10968(-)		WP_012258232.1	50S ribosomal protein L4	100.0	38.3	47.1
MGA_493	LOCUS_04880	sequence11:12250..12711(+)	internal_stop_codon	12709..12711(+),12952..12954(+),12235..12237(+),12802..12804(+),12214..12216(+)		WP_010918928.1	phenylalanine--tRNA ligase subunit alpha	100.0	41.5	42.5
MGA_496	LOCUS_04910	sequence11:15739..15975(-)	internal_stop_codon	15739..15741(-),15676..15678(-),15646..15648(-)		WP_004526891.1	NADP(H)-dependent aldo-keto reductase	100.0	22.0	57.7
MGA_497	LOCUS_04920	sequence11:16036..16383(-)	internal_stop_codon	16489..16491(-),16459..16461(-)		WP_009902004.1	hydrolase	92.2	56.1	37.7
MGA_498	LOCUS_04930	sequence11:17995..18213(+)	internal_stop_codon	18226..18228(+),18376..18378(+),18481..18483(+),18367..18369(+),18211..18213(+),17986..17988(+)		WP_002657046.1	CTP synthase (glutamine hydrolyzing)	100.0	13.5	62.5
MGA_499	LOCUS_04940	sequence11:19012..19212(+)	internal_stop_codon	18895..18897(+),19390..19392(+),19210..19212(+),19228..19230(+),19285..19287(+),18883..18885(+),18982..18984(+),18991..18993(+),18823..18825(+),19369..19371(+)		WP_007326169.1	CTP synthase	98.5	11.6	49.2
MGA_500	LOCUS_04950	sequence11:19414..19563(+)	internal_stop_codon	19390..19392(+),19369..19371(+)		WP_165446568.1	CTP synthase	95.9	7.9	40.4
MGA_501	LOCUS_04960	sequence11:19834..19971(-)	internal_stop_codon	19834..19836(-),20122..20124(-),20008..20010(-),20194..20196(-)		WP_097531964.1	peptide chain release factor 2	97.8	11.7	54.5
MGA_502	LOCUS_04970	sequence11:20341..20700(-)	internal_stop_codon	20194..20196(-),20122..20124(-),20341..20343(-)		WP_003421389.1	peptide chain release factor 1	96.6	32.5	41.7
MGA_512	LOCUS_05060	sequence12:114..431(-)	internal_stop_codon	603..605(-),672..674(-),114..116(-)		WP_011964452.1	leucine--tRNA ligase	99.0	11.1	54.2
MGA_513	LOCUS_05070	sequence12:672..992(-)	internal_stop_codon	672..674(-),603..605(-),1239..1241(-),1221..1223(-),1155..1157(-)		WP_003643180.1	leucine--tRNA ligase	85.8	11.3	54.9
MGA_514	LOCUS_05080	sequence12:1803..2042(-)	internal_stop_codon	1803..1805(-),2097..2099(-),2043..2045(-)		WP_003246072.1	leucine--tRNA ligase	98.7	9.7	56.4
MGA_515	LOCUS_05090	sequence12:2097..2351(-)	internal_stop_codon	2562..2564(-),2097..2099(-),1803..1805(-),2043..2045(-)		WP_000009461.1	leucine--tRNA ligase	92.9	8.2	53.8
MGA_516	LOCUS_05100	sequence12:2562..2867(-)	internal_stop_codon	2562..2564(-)		WP_001830785.1	leucine--tRNA ligase	99.0	11.2	70.0
MGA_520	LOCUS_05140	sequence12:8091..8315(-)	internal_stop_codon	7983..7985(-),7890..7892(-),8412..8414(-),8316..8318(-),8037..8039(-),8091..8093(-)		WP_172824500.1	cysteine desulfurase	100.0	17.2	41.9
MGA_521	LOCUS_05150	sequence12:8412..8732(-)	internal_stop_codon	8412..8414(-),8316..8318(-)		WP_011124238.1	SufS family cysteine desulfurase	95.3	24.9	40.0
MGA_524	LOCUS_05180	sequence12:9915..10112(-)	internal_stop_codon	10263..10265(-),10209..10211(-)		WP_011228950.1	Fe-S cluster assembly protein SufB	100.0	13.9	66.2
MGA_525	LOCUS_05190	sequence12:11328..11510(-)	internal_stop_codon	11580..11582(-),11799..11801(-),11634..11636(-),11544..11546(-)		WP_011964481.1	Fe-S cluster assembly ATPase SufC	91.7	22.1	50.9
MGA_527	LOCUS_05210	sequence12:13202..13381(+)	internal_stop_codon	13154..13156(+)		WP_010881225.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	76.3	16.7	55.1
MGA_530	LOCUS_05240	sequence12:14754..15188(-)	internal_stop_codon	15423..15425(-),15348..15350(-),15225..15227(-),15279..15281(-),15219..15221(-)		WP_012048305.1	YvcK family protein	93.8	30.3	43.1
MGA_531	LOCUS_05250	sequence12:15585..15776(-)	internal_stop_codon	15423..15425(-),15348..15350(-),15507..15509(-),15585..15587(-),15543..15545(-),15474..15476(-)		WP_011462178.1	YvcK family protein	88.9	10.7	44.6
MGA_535	LOCUS_05290	sequence12:18699..18974(-)	internal_stop_codon	19095..19097(-),19158..19160(-),19116..19118(-),18669..18671(-),18699..18701(-)		WP_002679355.1	alanine--tRNA ligase	91.2	13.8	59.0
MGA_536	LOCUS_05300	sequence12:19572..19775(-)	internal_stop_codon	19365..19367(-),19290..19292(-),19500..19502(-),19935..19937(-),19989..19991(-),19473..19475(-),19572..19574(-),19410..19412(-)		WP_011964045.1	alanine--tRNA ligase	95.5	7.2	53.1
MGA_543	LOCUS_05370	sequence12:24755..24922(-)	internal_stop_codon	24755..24757(-),25049..25051(-),24740..24742(-),25106..25108(-),25205..25207(-),25196..25198(-),24593..24595(-)		WP_010922308.1	DNA gyrase subunit A	100.0	6.6	52.7
MGA_544	LOCUS_05380	sequence12:25316..25801(-)	internal_stop_codon	25316..25318(-),25049..25051(-),26066..26068(-),25901..25903(-),25196..25198(-),26036..26038(-),25106..25108(-),25205..25207(-)		WP_003723770.1	DNA gyrase subunit A	98.8	18.6	56.6
MGA_545	LOCUS_05390	sequence12:26066..26473(-)	internal_stop_codon	26486..26488(-),26594..26596(-),26036..26038(-),26066..26068(-),25901..25903(-),26582..26584(-)		WP_002857904.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	100.0	15.3	63.7
MGA_546	LOCUS_05400	sequence12:27439..27630(+)	internal_stop_codon	27691..27693(+),27643..27645(+),27718..27720(+),27682..27684(+),27628..27630(+)		WP_010901983.1	UTP--glucose-1-phosphate uridylyltransferase AglF	100.0	26.4	48.4
MGA_551	LOCUS_05450	sequence13:6900..7118(+)	internal_stop_codon	6801..6803(+),6798..6800(+),7194..7196(+),7116..7118(+)		WP_009898724.1	GspE/PulE family protein	98.6	12.7	50.7
MGA_552	LOCUS_05460	sequence13:7254..7511(+)	internal_stop_codon	7755..7757(+),7773..7775(+),7194..7196(+),7116..7118(+),7509..7511(+)		WP_012546013.1	type IV-A pilus assembly ATPase PilB	100.0	15.0	71.8
MGA_556	LOCUS_05500	sequence13:8934..9155(+)	internal_stop_codon	8829..8831(+),8883..8885(+),8718..8720(+)		WP_012546785.1	type II secretion system F family protein	97.3	17.4	49.3
MGA_561	LOCUS_05550	sequence13:15651..15902(-)	internal_stop_codon	15651..15653(-),16080..16082(-),15969..15971(-),16083..16085(-),15648..15650(-),15633..15635(-),15546..15548(-)		WP_002678792.1	transcription-repair coupling factor	100.0	7.3	57.1
MGA_562	LOCUS_05560	sequence13:16617..16907(-)	internal_stop_codon	17034..17036(-),16479..16481(-),16617..16619(-),17001..17003(-),16611..16613(-),17046..17048(-),16404..16406(-),16338..16340(-),16485..16487(-)		WP_207791417.1	transcription-repair coupling factor	96.9	8.2	43.0
MGA_565	LOCUS_05590	sequence13:20049..20372(-)	internal_stop_codon	19821..19823(-),19797..19799(-),19971..19973(-),20049..20051(-)		WP_012583955.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	97.2	30.4	48.1
MGA_573	LOCUS_05670	sequence14:3232..3555(-)	internal_stop_codon	3559..3561(-),3232..3234(-),3640..3642(-)		WP_000159041.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	97.2	29.6	51.0
MGA_574	LOCUS_05680	sequence14:3806..4033(-)	internal_stop_codon	4139..4141(-),4232..4234(-)		WP_010964578.1	RluA family pseudouridine synthase	97.3	21.7	43.8
MGA_578	LOCUS_05720	sequence14:10586..10756(+)	internal_stop_codon	10754..10756(+),10574..10576(+),10349..10351(+),10421..10423(+),10769..10771(+),10412..10414(+),10787..10789(+)		WP_010965121.1	recombinase RecA	100.0	14.9	60.7
MGA_583	LOCUS_05770	sequence14:12772..13407(-)	internal_stop_codon	12772..12774(-)		WP_010942437.1	trigger factor	99.5	48.3	28.3
MGA_584	LOCUS_05780	sequence14:15186..15587(-)	internal_stop_codon	15702..15704(-),15777..15779(-)		WP_007051640.1	molecular chaperone DnaK	98.5	20.9	36.3
MGA_585	LOCUS_05790	sequence14:15891..16337(-)	internal_stop_codon	16548..16550(-),16509..16511(-),15702..15704(-),15891..15893(-),15777..15779(-)		WP_003021930.1	molecular chaperone DnaK	100.0	23.1	62.2
MGA_586	LOCUS_05800	sequence14:16548..16733(-)	internal_stop_codon	16548..16550(-),16935..16937(-),16746..16748(-),16509..16511(-),17019..17021(-)		WP_010938112.1	molecular chaperone DnaK	96.7	9.3	78.0
MGA_589	LOCUS_05830	sequence14:18298..18585(-)	internal_stop_codon	18598..18600(-),18298..18300(-),18589..18591(-)		WP_032682519.1	translation initiation factor IF-3	90.5	35.8	39.5
MGA_595	LOCUS_05890	sequence14:22502..22846(-)	internal_stop_codon	22424..22426(-),22490..22492(-),22502..22504(-)		WP_003433028.1	prolyl-tRNA synthetase associated domain-containing protein	71.1	46.9	33.7
MGA_596	LOCUS_05900	sequence14:23179..23532(-)	internal_stop_codon	22996..22998(-),23143..23145(-),23074..23076(-),23131..23133(-),23179..23181(-),23596..23598(-),23104..23106(-),23116..23118(-)		WP_000431277.1	histidine--tRNA ligase	92.3	24.4	35.5
MGA_597	LOCUS_05910	sequence14:23596..23826(-)	internal_stop_codon	23947..23949(-),23596..23598(-),24046..24048(-)		WP_000431277.1	histidine--tRNA ligase	98.7	17.1	48.0
MGA_609	LOCUS_06020	sequence15:15302..15565(-)	internal_stop_codon	15302..15304(-),15143..15145(-)		WP_010880417.1	epoxyqueuosine reductase QueH	87.4	19.1	45.6
MGA_610	LOCUS_06030	sequence15:15641..15934(-)	internal_stop_codon	15629..15631(-),15575..15577(-),15641..15643(-),16112..16114(-),15935..15937(-),15941..15943(-)		WP_201626801.1	ribonuclease HII	93.8	40.8	45.7
MGA_612	LOCUS_06050	sequence15:18155..18370(-)	internal_stop_codon	18605..18607(-),18371..18373(-),18155..18157(-),18656..18658(-)		WP_011057738.1	ABC transporter ATP-binding protein	97.2	21.6	62.3
MGA_614	LOCUS_06070	sequence15:19191..19397(-)	internal_stop_codon	18909..18911(-),19191..19193(-),19602..19604(-),19431..19433(-),19560..19562(-),19119..19121(-)		WP_000178397.1	succinate-semialdehyde dehydrogenase	86.8	13.0	51.7
MGA_615	LOCUS_06080	sequence15:19602..19934(-)	internal_stop_codon	19431..19433(-),19560..19562(-),19971..19973(-),19602..19604(-)		WP_011123021.1	NAD-dependent succinate-semialdehyde dehydrogenase	97.3	23.4	49.5
MGA_616	LOCUS_06090	sequence15:19971..20207(-)	internal_stop_codon	19971..19973(-)		WP_011086774.1	NAD-dependent succinate-semialdehyde dehydrogenase	87.2	14.7	48.5
MGA_617	LOCUS_06100	sequence15:20645..20863(-)	internal_stop_codon	20645..20647(-)		WP_037397025.1	6,7-dimethyl-8-ribityllumazine synthase	95.8	43.9	36.2
MGA_626	LOCUS_06190	sequence16:2780..3076(+)	internal_stop_codon	2735..2737(+),2738..2740(+),3074..3076(+),3146..3148(+),2648..2650(+)		WP_011140038.1	replicative DNA helicase	90.8	12.6	71.9
MGA_628	LOCUS_06210	sequence16:3727..3906(+)	internal_stop_codon	4114..4116(+),3904..3906(+),3976..3978(+),3706..3708(+)		WP_011392069.1	valine--tRNA ligase	100.0	6.7	62.7
MGA_629	LOCUS_06220	sequence16:5317..5538(+)	internal_stop_codon	5746..5748(+),5755..5757(+),5536..5538(+),5086..5088(+),5131..5133(+),5224..5226(+),5296..5298(+),5308..5310(+)		WP_012583452.1	valine--tRNA ligase	100.0	7.4	45.2
MGA_630	LOCUS_06230	sequence16:6538..6792(+)	internal_stop_codon	6790..6792(+),6802..6804(+),6952..6954(+),6517..6519(+),6406..6408(+),6304..6306(+),6529..6531(+)		WP_011730394.1	redox-regulated ATPase YchF	84.5	19.3	63.4
MGA_636	LOCUS_06290	sequence16:13225..13452(+)	internal_stop_codon	13450..13452(+),13216..13218(+),13468..13470(+),13129..13131(+)		WP_011031376.1	ABC transporter ATP-binding protein	96.0	11.7	49.3
MGA_637	LOCUS_06300	sequence16:13597..13770(+)	internal_stop_codon	13450..13452(+),13468..13470(+)		WP_005802963.1	ABC transporter ATP-binding protein	86.0	8.3	59.2
MGA_640	LOCUS_06330	sequence16:15621..15881(+)	internal_stop_codon	15879..15881(+),15915..15917(+),15561..15563(+)		WP_010941488.1	hypothetical protein	95.3	40.6	63.4
MGA_642	LOCUS_06350	sequence16:17083..17511(-)	internal_stop_codon	17083..17085(-)		WP_000145144.1	DUF1697 domain-containing protein	64.1	50.6	51.6
MGA_647	LOCUS_06400	sequence16:20105..20314(-)	internal_stop_codon	20318..20320(-),20105..20107(-)		WP_011404327.1	excinuclease ABC subunit UvrC	100.0	10.0	41.4
MGA_649	LOCUS_06420	sequence16:21272..21475(-)	internal_stop_codon	21248..21250(-),21272..21274(-),21569..21571(-)		WP_012972569.1	excinuclease ABC subunit UvrC	91.0	9.9	55.7
MGA_662	LOCUS_06540	sequence17:11729..12130(+)	internal_stop_codon	12128..12130(+)		WP_002354981.1	peptide deformylase	92.5	72.7	36.0
MGA_665	LOCUS_06570	sequence17:13456..13722(+)	internal_stop_codon	13720..13722(+)		WP_010902137.1	dCTP deaminase	97.7	46.2	43.3
MGA_666	LOCUS_06580	sequence17:14290..14652(+)	internal_stop_codon	14080..14082(+),14017..14019(+)		WP_011947925.1	thymidylate kinase	100.0	50.6	34.2
MGA_669	LOCUS_06610	sequence17:16061..16201(+)	internal_stop_codon	16199..16201(+),15941..15943(+),16034..16036(+)		WP_211826335.1	thymidylate synthase	97.8	15.2	57.8
MGA_670	LOCUS_06620	sequence17:16243..16539(+)	internal_stop_codon	16621..16623(+),16573..16575(+),16609..16611(+),16537..16539(+)		WP_013225957.1	dihydrofolate reductase	87.8	56.6	43.0
MGA_673	LOCUS_06650	sequence17:17743..18243(-)	internal_stop_codon	18286..18288(-),17743..17745(-)		WP_011015730.1	proline--tRNA ligase	100.0	29.5	47.3
MGA_675	LOCUS_06670	sequence17:20775..21404(-)	internal_stop_codon	21438..21440(-),20775..20777(-)		WP_011402918.1	ribonucleoside-diphosphate reductase subunit alpha	98.6	22.2	58.0
MGA_676	LOCUS_06680	sequence17:21438..21740(-)	internal_stop_codon	21438..21440(-),21789..21791(-)		WP_011229097.1	ribonucleoside-diphosphate reductase subunit alpha	89.0	13.8	53.9
MGA_677	LOCUS_06690	sequence17:21789..22040(-)	internal_stop_codon	21789..21791(-),22053..22055(-),22308..22310(-),22125..22127(-)		WP_011402918.1	ribonucleoside-diphosphate reductase subunit alpha	95.2	8.5	55.7
MGA_678	LOCUS_06700	sequence17:22125..22283(-)	internal_stop_codon	22053..22055(-),22308..22310(-),22125..22127(-)		WP_011402918.1	ribonucleoside-diphosphate reductase subunit alpha	100.0	5.6	80.8
MGA_680	LOCUS_06720	sequence17:22695..23294(-)	internal_stop_codon	22695..22697(-),23319..23321(-)		WP_011402917.1	ribonucleotide-diphosphate reductase subunit beta	98.0	60.2	63.1
MGA_682	LOCUS_06730	sequence18:1133..1384(+)	internal_stop_codon	1061..1063(+),1397..1399(+),1382..1384(+)		WP_041914012.1	polyribonucleotide nucleotidyltransferase	98.8	11.6	56.1
MGA_683	LOCUS_06740	sequence18:1403..1921(+)	internal_stop_codon	2186..2188(+),1397..1399(+),1382..1384(+),2054..2056(+),1919..1921(+)		WP_004081541.1	polyribonucleotide nucleotidyltransferase	100.0	23.9	32.8
MGA_684	LOCUS_06750	sequence18:2252..2701(+)	internal_stop_codon	2186..2188(+),2864..2866(+),2054..2056(+),2699..2701(+)		WP_002721512.1	polyribonucleotide nucleotidyltransferase	98.7	20.4	53.1
MGA_689	LOCUS_06800	sequence18:5558..5857(-)	internal_stop_codon	5558..5560(-),5519..5521(-)		WP_011037717.1	polyphosphate polymerase domain-containing protein	88.9	31.3	40.9
MGA_713	LOCUS_07040	sequence19:3152..3466(-)	internal_stop_codon	3494..3496(-),3560..3562(-),3152..3154(-),3683..3685(-),3650..3652(-)		WP_013383887.1	UMP kinase	97.1	41.7	50.5
MGA_718	LOCUS_07090	sequence19:5985..6275(-)	internal_stop_codon	6402..6404(-),6309..6311(-),5730..5732(-),6300..6302(-),5985..5987(-),6381..6383(-)		WP_011166843.1	ribonuclease J	95.8	15.2	49.5
MGA_719	LOCUS_07100	sequence19:6402..6644(-)	internal_stop_codon	6402..6404(-),6309..6311(-),6300..6302(-),6381..6383(-),6774..6776(-)		WP_011861169.1	ribonuclease J	100.0	14.3	42.5
MGA_720	LOCUS_07110	sequence19:7083..7358(-)	internal_stop_codon	6891..6893(-),7083..7085(-),6921..6923(-),7023..7025(-)		WP_012256877.1	ribonuclease J	44.0	7.0	55.0
MGA_728	LOCUS_07190	sequence19:19069..19377(+)	internal_stop_codon	19051..19053(+)		WP_137264126.1	single-stranded DNA-binding protein	78.4	53.0	45.0
MGA_729	LOCUS_07200	sequence19:19364..19639(+)	partial			WP_002939250.1	30S ribosomal protein S18	56.0	64.6	60.8
MGA_732	LOCUS_07220	sequence20:1193..1474(+)	partial			WP_003130519.1	DUF2177 family protein	83.9	59.4	35.4
MGA_737	LOCUS_07270	sequence20:7932..8150(-)	internal_stop_codon	7848..7850(-),7737..7739(-),7704..7706(-),7932..7934(-)		WP_011964472.1	riboflavin synthase	94.4	36.4	40.3
MGA_744	LOCUS_07340	sequence20:15487..15681(+)	internal_stop_codon	15244..15246(+)		WP_011964443.1	DNA-3-methyladenine glycosylase I	98.4	34.2	58.7
MGA_745	LOCUS_07350	sequence20:16240..16587(+)	internal_stop_codon	16585..16587(+),16237..16239(+),16060..16062(+)		WP_003090885.1	ABC transporter ATP-binding protein	95.7	34.8	50.0
MGA_747	LOCUS_07370	sequence20:18251..18577(+)	internal_stop_codon	18707..18709(+),18575..18577(+),18821..18823(+),18761..18763(+),18614..18616(+)		WP_003227944.1	UTP--glucose-1-phosphate uridylyltransferase GalU	100.0	37.0	65.7
MGA_757	LOCUS_07470	sequence21:10900..11091(-)	internal_stop_codon	11167..11169(-),10900..10902(-),11101..11103(-)		WP_003229137.1	bacitracin ABC transporter ATP-binding protein BceA	71.4	17.8	51.1
MGA_760	LOCUS_07490	sequence21:13849..14112(-)	partial			WP_002468610.1	DNA polymerase III subunit delta' C-terminal domain-containing protein	97.7	27.9	34.9
MGA_762	LOCUS_07510	sequence21:14842..15162(+)	internal_stop_codon	15298..15300(+),15166..15168(+),15214..15216(+),15160..15162(+),15394..15396(+)		WP_010932908.1	preprotein translocase subunit SecA	55.7	5.6	40.7
MGA_763	LOCUS_07520	sequence21:15418..15594(+)	internal_stop_codon	15673..15675(+),15298..15300(+),15214..15216(+),15394..15396(+),15814..15816(+),15160..15162(+),15166..15168(+),15592..15594(+)		WP_004082002.1	preprotein translocase subunit SecA	100.0	6.7	56.9
MGA_764	LOCUS_07530	sequence21:16105..16287(+)	internal_stop_codon	16345..16347(+),15814..15816(+),16339..16341(+),16441..16443(+),16090..16092(+),15967..15969(+),16285..16287(+)		WP_004082002.1	preprotein translocase subunit SecA	100.0	6.9	70.0
MGA_765	LOCUS_07540	sequence21:16537..16824(+)	internal_stop_codon	16285..16287(+),16441..16443(+),16501..16503(+)		WP_004115494.1	preprotein translocase subunit SecA	87.4	8.9	45.8
MGA_768	LOCUS_07570	sequence22:435..638(-)	internal_stop_codon	822..824(-),873..875(-),771..773(-),825..827(-),678..680(-),642..644(-),654..656(-),435..437(-)		WP_000893058.1	phospho-N-acetylmuramoyl-pentapeptide-transferase	100.0	20.4	50.7
MGA_774	LOCUS_07630	sequence22:6645..6908(+)	internal_stop_codon	6492..6494(+),6537..6539(+),6981..6983(+),6948..6950(+),7113..7115(+),6906..6908(+),6591..6593(+)		WP_010941209.1	DNA polymerase I	100.0	9.7	42.5
MGA_777	LOCUS_07660	sequence22:9379..9573(+)	internal_stop_codon	9223..9225(+),9307..9309(+),9571..9573(+)		WP_011962420.1	DNA damage-inducible protein D	100.0	23.1	67.7
MGA_778	LOCUS_07670	sequence22:9860..10228(+)	internal_stop_codon	10226..10228(+),10337..10339(+),10436..10438(+),10367..10369(+)		WP_011072672.1	protease HtpX	100.0	38.0	46.7
MGA_782	LOCUS_07710	sequence22:14665..14991(+)	internal_stop_codon	14656..14658(+),15172..15174(+),15130..15132(+),14578..14580(+),14434..14436(+),14521..14523(+),14425..14427(+),15205..15207(+),15049..15051(+),14572..14574(+),14989..14991(+),14509..14511(+)		WP_004080566.1	DUF262 domain-containing protein	100.0	19.3	39.8
MGA_783	LOCUS_07720	sequence22:16589..16735(+)	internal_stop_codon	16997..16999(+),16328..16330(+),16460..16462(+),16547..16549(+),16556..16558(+),16733..16735(+),16436..16438(+)		WP_012048370.1	glycine--tRNA ligase	100.0	10.4	68.8
MGA_784	LOCUS_07730	sequence22:16799..16999(+)	internal_stop_codon	17273..17275(+),16997..16999(+),17189..17191(+),17183..17185(+),17132..17134(+),16733..16735(+),17246..17248(+)		WP_012048370.1	glycine--tRNA ligase	100.0	14.0	57.6
MGA_785	LOCUS_07740	sequence22:17345..17515(+)	internal_stop_codon	17273..17275(+),17189..17191(+),17339..17341(+),17183..17185(+),17132..17134(+),17246..17248(+)		WP_000412099.1	glycine--tRNA ligase	98.2	11.9	58.2
MGA_787	LOCUS_07760	sequence23:169..516(-)	internal_stop_codon	169..171(-),577..579(-),157..159(-),151..153(-)		WP_011057445.1	tRNA pseudouridine(55) synthase TruB	89.6	36.6	40.6
MGA_792	LOCUS_07810	sequence23:9921..10073(+)	partial			WP_010966853.1	NAD(P)/FAD-dependent oxidoreductase	96.0	12.6	54.9
MGA_798	LOCUS_07870	sequence23:14130..14825(+)	partial			WP_012259090.1	sortase	56.3	41.6	32.1
MGA_802	LOCUS_07910	sequence23:16057..16485(+)	internal_stop_codon	16570..16572(+),16615..16617(+),16537..16539(+),16585..16587(+),16483..16485(+)		WP_011962679.1	NAD(P)H-dependent oxidoreductase	97.9	66.2	43.2
MGA_803	LOCUS_07920	sequence23:16699..16863(+)	internal_stop_codon	16990..16992(+),17023..17025(+),16915..16917(+),16942..16944(+),16861..16863(+)		WP_011202428.1	pirin family protein	98.1	22.2	50.9
MGA_805	LOCUS_07940	sequence24:731..904(+)	partial			WP_027479923.1	leucine--tRNA ligase	100.0	6.9	50.9
MGA_810	LOCUS_07990	sequence24:3710..3988(-)	internal_stop_codon	4193..4195(-),4010..4012(-)		WP_012545660.1	ribosome recycling factor	98.9	49.2	47.3
MGA_811	LOCUS_08000	sequence24:5188..5493(-)	internal_stop_codon	4927..4929(-),5188..5190(-),5668..5670(-),5089..5091(-),5053..5055(-),5641..5643(-)		WP_011837329.1	manganese-dependent inorganic pyrophosphatase	97.0	31.5	48.5
MGA_817	LOCUS_08060	sequence24:13100..13564(+)	partial			WP_064496656.1	radical SAM protein	89.6	50.4	32.4
MGA_821	LOCUS_08090	sequence25:211..402(+)	internal_stop_codon	577..579(+),181..183(+),175..177(+),400..402(+)		WP_010978681.1	tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3	100.0	13.4	50.8
MGA_829	LOCUS_08170	sequence25:5161..5433(-)	internal_stop_codon	5482..5484(-),5452..5454(-),5665..5667(-),5161..5163(-)		WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	100.0	23.6	51.1
MGA_830	LOCUS_08180	sequence25:5482..5637(-)	internal_stop_codon	5482..5484(-),5452..5454(-),5797..5799(-),5665..5667(-)		WP_002355772.1	tRNA guanosine(34) transglycosylase Tgt	100.0	13.4	60.8
MGA_831	LOCUS_08190	sequence25:5797..5958(-)	internal_stop_codon	6037..6039(-),5797..5799(-),5983..5985(-),5665..5667(-)		WP_008761519.1	tRNA guanosine(34) transglycosylase Tgt	81.1	11.4	69.8
MGA_832	LOCUS_08200	sequence25:6037..6261(-)	internal_stop_codon	6037..6039(-),5797..5799(-),5983..5985(-)		WP_005902330.1	tRNA guanosine(34) transglycosylase Tgt	91.9	18.2	63.2
MGA_836	LOCUS_08240	sequence25:12091..12270(+)	internal_stop_codon	11893..11895(+),12031..12033(+),12052..12054(+),11926..11928(+)		WP_010922289.1	NADP-dependent malic enzyme	98.3	15.5	53.3
MGA_847	LOCUS_08350	sequence26:10374..10700(-)	internal_stop_codon	10704..10706(-),10752..10754(-)		WP_010943421.1	large conductance mechanosensitive channel protein MscL	88.0	61.5	47.4
MGA_849	LOCUS_08370	sequence26:11079..11426(-)	internal_stop_codon	11469..11471(-),11487..11489(-)		WP_010887017.1	lysine--tRNA ligase	40.0	8.8	50.0
MGA_850	LOCUS_08380	sequence26:11487..11720(-)	internal_stop_codon	11469..11471(-),11487..11489(-)		WP_011015310.1	lysine--tRNA ligase	94.8	13.9	34.2
MGA_851	LOCUS_08390	sequence26:11832..12140(-)	internal_stop_codon	12195..12197(-),11832..11834(-)		WP_164930684.1	lysine--tRNA ligase	98.0	16.3	42.0
MGA_862	LOCUS_08500	sequence27:3994..4230(+)	internal_stop_codon	4228..4230(+)		WP_010933808.1	ribosome biogenesis GTP-binding protein YihA/YsxC	100.0	40.1	53.8
MGA_873	LOCUS_08610	sequence28:1628..1870(+)	internal_stop_codon	1868..1870(+)		WP_003245569.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	100.0	25.5	50.0
MGA_877	LOCUS_08650	sequence28:3657..3866(-)	internal_stop_codon	3513..3515(-),3657..3659(-)		WP_002357985.1	endonuclease III	89.9	27.0	51.6
MGA_885	LOCUS_08730	sequence28:9828..10151(+)	internal_stop_codon	9774..9776(+),9789..9791(+),9573..9575(+),9729..9731(+)		WP_012584026.1	2-oxoacid:acceptor oxidoreductase subunit alpha	86.0	16.1	39.1
MGA_886	LOCUS_08740	sequence28:10563..10769(+)	internal_stop_codon	10767..10769(+),11022..11024(+),10773..10775(+),10980..10982(+),10905..10907(+),11001..11003(+)		WP_011762917.1	2-oxoacid:ferredoxin oxidoreductase subunit beta	98.5	21.4	46.3
MGA_887	LOCUS_08750	sequence28:11569..11991(-)	internal_stop_codon	12010..12012(-)		WP_012546848.1	deoxyribodipyrimidine photo-lyase	86.4	27.7	59.5
MGA_888	LOCUS_08760	sequence28:12010..12555(-)	internal_stop_codon	12010..12012(-),12772..12774(-),12697..12699(-),12748..12750(-)		WP_012546848.1	deoxyribodipyrimidine photo-lyase	96.7	40.0	36.5
MGA_891	LOCUS_08790	sequence29:1026..1184(-)	internal_stop_codon	1209..1211(-),1026..1028(-)		WP_207280530.1	RNA polymerase sigma factor RpoD	98.1	14.2	49.0
MGA_892	LOCUS_08800	sequence29:1209..1403(-)	internal_stop_codon	1656..1658(-),1569..1571(-),1497..1499(-),1545..1547(-),1671..1673(-),1209..1211(-),1026..1028(-)		WP_011861220.1	RNA polymerase sigma factor RpoD	100.0	16.4	56.2
MGA_893	LOCUS_08810	sequence29:1671..2054(-)	internal_stop_codon	1545..1547(-),1569..1571(-),1497..1499(-)		WP_012258920.1	RNA polymerase sigma factor RpoD	83.5	27.6	34.6
MGA_896	LOCUS_08840	sequence29:4321..4599(+)	partial			WP_005479720.1	YraN family protein	96.7	73.6	41.1
MGA_902	LOCUS_08900	sequence29:12257..12478(-)	internal_stop_codon	12140..12142(-),12257..12259(-)		WP_012545970.1	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB	93.2	15.7	41.2
MGA_906	LOCUS_08940	sequence30:1661..1867(-)	internal_stop_codon	1565..1567(-),1661..1663(-)		WP_012707751.1	30S ribosomal protein S7	94.1	41.0	45.3
MGA_910	LOCUS_08980	sequence30:4946..5344(-)	internal_stop_codon	4946..4948(-)		WP_000135260.1	30S ribosomal protein S4	99.2	66.2	51.1
MGA_911	LOCUS_08990	sequence30:5965..6165(-)	internal_stop_codon	5941..5943(-),5965..5967(-),5869..5871(-)		WP_011070630.1	30S ribosomal protein S13	100.0	55.9	54.5
MGA_918	LOCUS_09060	sequence30:11519..12133(-)	internal_stop_codon	11375..11377(-),12257..12259(-),12239..12241(-),11519..11521(-),12137..12139(-)		WP_011016366.1	tryptophan--tRNA ligase	90.2	57.2	51.6
MGA_924	LOCUS_09110	sequence31:1978..2205(+)	internal_stop_codon	1933..1935(+),2344..2346(+),2203..2205(+),2470..2472(+)		WP_046743078.1	M3 family metallopeptidase	100.0	10.6	48.0
MGA_933	LOCUS_09200	sequence31:7322..7486(+)	internal_stop_codon	7688..7690(+),7259..7261(+),7211..7213(+),7736..7738(+),7484..7486(+)		WP_005901930.1	response regulator transcription factor	94.4	22.8	58.8
MGA_935	LOCUS_09220	sequence31:8364..8657(+)	internal_stop_codon	8745..8747(+),8655..8657(+),8880..8882(+),8805..8807(+),8799..8801(+)		WP_010880154.1	HAMP domain-containing sensor histidine kinase	95.9	31.0	37.1
MGA_942	LOCUS_09290	sequence32:3139..3405(+)	internal_stop_codon	3127..3129(+),3403..3405(+),3073..3075(+)		WP_151756788.1	type IV secretion system DNA-binding domain-containing protein	95.5	8.6	36.5
MGA_957	LOCUS_09420	sequence33:7799..7966(-)	internal_stop_codon	7799..7801(-)		WP_003222500.1	thioredoxin	92.7	51.0	52.8
MGA_962	LOCUS_09470	sequence34:150..335(-)	internal_stop_codon	150..152(-)		WP_010880264.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	93.4	11.5	57.9
MGA_964	LOCUS_09490	sequence34:4356..4523(-)	internal_stop_codon	4779..4781(-),4614..4616(-),4545..4547(-),4683..4685(-)		WP_013399740.1	DNA-directed RNA polymerase subunit beta'	92.7	3.8	54.9
MGA_965	LOCUS_09500	sequence34:5781..6002(-)	internal_stop_codon	5544..5546(-),5742..5744(-),5682..5684(-),6015..6017(-),5781..5783(-),6057..6059(-),5703..5705(-),5712..5714(-)		WP_012869935.1	DNA-directed RNA polymerase subunit beta'	100.0	4.4	80.8
MGA_966	LOCUS_09510	sequence34:6057..6689(-)	internal_stop_codon	6738..6740(-),6057..6059(-),6015..6017(-),5781..5783(-)		WP_012256762.1	DNA-directed RNA polymerase subunit beta'	97.1	13.4	63.1
MGA_967	LOCUS_09520	sequence34:6738..7181(-)	internal_stop_codon	7320..7322(-),7296..7298(-),6738..6740(-)		WP_003974308.1	DNA-directed RNA polymerase subunit beta'	99.3	12.4	36.6
MGA_968	LOCUS_09530	sequence34:7611..7913(-)	internal_stop_codon	7947..7949(-),8046..8048(-),7932..7934(-),7950..7952(-),7917..7919(-)		WP_000907191.1	DNA-directed RNA polymerase subunit beta	83.0	6.5	63.9
MGA_969	LOCUS_09540	sequence34:8730..8867(-)	internal_stop_codon	8730..8732(-),8547..8549(-),8499..8501(-),8928..8930(-),8493..8495(-),9069..9071(-),8628..8630(-),8646..8648(-)		WP_005791521.1	DNA-directed RNA polymerase subunit beta	97.8	3.5	68.2
MGA_970	LOCUS_09550	sequence34:9069..9266(-)	internal_stop_codon	9342..9344(-),8928..8930(-),9069..9071(-)		WP_041272205.1	DNA-directed RNA polymerase subunit beta	98.5	5.7	62.5
MGA_972	LOCUS_09570	sequence34:9738..9995(-)	internal_stop_codon	10089..10091(-),9651..9653(-),9738..9740(-)		WP_011393945.1	DNA-directed RNA polymerase subunit beta	100.0	7.4	71.8
MGA_973	LOCUS_09580	sequence34:10089..10742(-)	internal_stop_codon	10830..10832(-)		WP_012048357.1	DNA-directed RNA polymerase subunit beta	85.3	14.9	45.8
MGA_976	LOCUS_09610	sequence35:719..922(-)	internal_stop_codon	950..952(-),716..718(-),719..721(-),641..643(-),974..976(-),1061..1063(-)		WP_001173889.1	cell division ATP-binding protein FtsE	92.5	27.0	61.3
MGA_982	LOCUS_09670	sequence35:5575..5946(-)	internal_stop_codon	5575..5577(-),5386..5388(-),5434..5436(-)		WP_010942919.1	hemolysin family protein	77.2	33.5	38.9
MGA_992	LOCUS_09760	sequence36:7575..7928(-)	internal_stop_codon	7575..7577(-),7548..7550(-),7434..7436(-),7536..7538(-),7368..7370(-)		WP_010965472.1	glycosyltransferase	94.0	32.7	55.5
MGA_993	LOCUS_09770	sequence37:1..591(+)	internal_stop_codon	589..591(+)		WP_010922363.1	DUF2130 domain-containing protein	91.8	40.8	36.0
MGA_994	LOCUS_09780	sequence37:655..1218(+)	internal_stop_codon	589..591(+)		WP_010922363.1	DUF2130 domain-containing protein	98.4	41.7	54.3
MGA_996	LOCUS_09800	sequence37:3532..3864(+)	internal_stop_codon	3910..3912(+),3862..3864(+),3481..3483(+)		WP_011021364.1	MFS transporter	98.2	26.6	43.2
MGA_997	LOCUS_09810	sequence37:6017..6265(+)	internal_stop_codon	6263..6265(+),6002..6004(+)		WP_011085889.1	alpha/beta-hydrolase family protein	97.6	14.6	43.8
MGA_998	LOCUS_09820	sequence37:6882..7016(+)	internal_stop_codon	6840..6842(+),6642..6644(+),7059..7061(+),7014..7016(+),6867..6869(+),7116..7118(+),6609..6611(+)		WP_001232664.1	pyruvate kinase	95.5	7.2	57.1
MGA_1007	LOCUS_09870	sequence38:5739..6110(+)	internal_stop_codon	6171..6173(+),6108..6110(+),6243..6245(+)		WP_010881287.1	GspE/PulE family protein	100.0	21.9	39.7
MGA_1008	LOCUS_09880	sequence38:6444..6632(+)	internal_stop_codon	6708..6710(+),6780..6782(+),6762..6764(+),6243..6245(+),6795..6797(+),6630..6632(+)		WP_012546013.1	type IV-A pilus assembly ATPase PilB	100.0	10.9	66.1
MGA_1016	LOCUS_09950	sequence39:5282..5524(+)	internal_stop_codon	5522..5524(+),5270..5272(+)		WP_005786942.1	LemA family protein	92.5	39.8	60.8
MGA_1017	LOCUS_09960	sequence39:5594..5791(+)	internal_stop_codon	5522..5524(+)		WP_008763440.1	LemA family protein	100.0	36.6	51.5
MGA_1018	LOCUS_09970	sequence39:6174..6389(+)	partial			WP_002118851.1	protease HtpX	80.3	18.9	50.9
MGA_1020	LOCUS_09980	sequence40:2863..3102(-)	internal_stop_codon	3109..3111(-),3250..3252(-)		WP_002227996.1	ABC-F family ATPase	84.8	12.6	41.8
MGA_1022	LOCUS_10000	sequence40:3565..4053(-)	internal_stop_codon	3565..3567(-),4150..4152(-)		WP_003233752.1	ABC-F family ATP-binding cassette domain-containing protein	87.7	25.5	40.6
MGA_1023	LOCUS_10010	sequence40:4150..4317(-)	internal_stop_codon	4150..4152(-)		WP_012582944.1	ABC transporter ATP-binding protein	85.5	7.9	55.3
MGA_1038	LOCUS_10150	sequence41:4402..4539(-)	internal_stop_codon	4795..4797(-),4780..4782(-),4606..4608(-),4591..4593(-),4402..4404(-),4777..4779(-),4393..4395(-),4282..4284(-),4765..4767(-)		WP_003386373.1	cell division protein FtsZ	95.6	11.7	62.8
MGA_1047	LOCUS_10220	sequence42:2608..2871(-)	internal_stop_codon	3007..3009(-),2608..2610(-),3010..3012(-),3157..3159(-)		WP_000002813.1	ATP-dependent Clp protease ATP-binding subunit	95.4	14.1	42.4
MGA_1048	LOCUS_10230	sequence42:3172..3396(-)	internal_stop_codon	3430..3432(-),3172..3174(-),3007..3009(-),3511..3513(-),3418..3420(-),3010..3012(-),3157..3159(-)		WP_011057229.1	ATP-dependent chaperone ClpB	100.0	8.5	59.5
MGA_1049	LOCUS_10240	sequence42:3694..3987(-)	internal_stop_codon	4135..4137(-),3511..3513(-),4183..4185(-),3694..3696(-)		WP_011228712.1	ATP-dependent chaperone ClpB	99.0	11.2	54.2
MGA_1053	LOCUS_10260	sequence43:440..748(+)	internal_stop_codon	746..748(+),821..823(+),755..757(+),968..970(+)		WP_011475978.1	RluA family pseudouridine synthase	86.3	29.9	36.0
MGA_1055	LOCUS_10280	sequence44:1225..1485(-)	internal_stop_codon	1522..1524(-),1693..1695(-)		WP_014467081.1	molecular chaperone HtpG	88.4	12.0	40.8
MGA_1057	LOCUS_10300	sequence44:2011..2502(-)	internal_stop_codon	2011..2013(-),1849..1851(-),2644..2646(-)		WP_003020060.1	molecular chaperone HtpG	100.0	25.5	48.5
MGA_1058	LOCUS_10310	sequence44:2644..3114(-)	internal_stop_codon	2644..2646(-)		WP_011387833.1	molecular chaperone HtpG	96.8	24.4	58.4
MGA_1061	LOCUS_10340	sequence44:4242..4388(-)	internal_stop_codon	4407..4409(-),4242..4244(-)		WP_015703454.1	type IV pilus twitching motility protein PilT	97.9	14.4	59.6
MGA_1068	LOCUS_10370	sequence46:308..766(+)	internal_stop_codon	191..193(+),764..766(+),794..796(+)		WP_010870117.1	prephenate dehydrogenase	82.9	28.7	43.8
MGA_1069	LOCUS_10380	sequence46:803..1057(+)	internal_stop_codon	1145..1147(+),764..766(+),794..796(+),1055..1057(+)		WP_010870117.1	prephenate dehydrogenase	95.2	17.9	50.0
MGA_1074	LOCUS_10420	sequence47:2577..2828(+)	internal_stop_codon	2826..2828(+)		WP_010972900.1	glycosyltransferase family 4 protein	100.0	21.9	43.4
MGA_1082	LOCUS_10490	sequence49:1350..1556(-)	internal_stop_codon	1716..1718(-),1740..1742(-),1332..1334(-),1350..1352(-),1839..1841(-),1713..1715(-),1224..1226(-),1605..1607(-)		WP_001019853.1	tyrosine--tRNA ligase	98.5	15.3	58.2