{ "type": "genome", "identifier": "GCA_022600675.1", "organism": "Actinomycetia bacterium", "title": "Actinomycetia bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Uppsala University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_022600675.1", "bioproject": "PRJNA742377", "biosample": "SAMN20447804", "wgs_master": "JAHZJW000000000.1", "refseq_category": "na", "taxid": "1883427", "species_taxid": "1883427", "organism_name": "Actinomycetia bacterium", "infraspecific_name": "", "isolate": "O_S4.2_bin.10", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/03/16", "asm_name": "ASM2260067v1", "submitter": "Uppsala University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/600/675/GCA_022600675.1_ASM2260067v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-03-16", "dateModified": "2022-03-16", "datePublished": "2022-03-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Actinomycetia bacterium" ], "sample_taxid": [ "1883427" ], "sample_host_organism": [ "Haliclona oculata" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Netherlands: Oosterschelde estury, Oosterschelde/East" ], "sample_host_location_id": [], "data_size": "0.665 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2337584", "Number of Sequences": "101", 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"strain": "strain=DSM 45119", "accession": "GCA_003635025.1", "taxid": 455193, "species_taxid": 455193, "relation_to_type": "type", "validated": true, "ani": 75.6639, "matched_fragments": 52, "total_fragments": 727, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jiangella muralis", "strain": "strain=DSM 45357", "accession": "GCA_001270745.1", "taxid": 702383, "species_taxid": 702383, "relation_to_type": "type", "validated": true, "ani": 75.5602, "matched_fragments": 54, "total_fragments": 727, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saccharopolyspora kobensis", "strain": "strain=ATCC 20501", "accession": "GCA_900108315.1", "taxid": 146035, "species_taxid": 146035, "relation_to_type": "type", "validated": true, "ani": 75.5433, "matched_fragments": 53, "total_fragments": 727, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0 }, 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"filament_cell_shape": null, "coccobacillus_cell_shape": null, "vibrio_cell_shape": null, "spiral_cell_shape": null }, "_gtdb_taxon": [ "d__Bacteria", "p__Actinomycetota", "c__Actinomycetes", "o__S36-B12", "f__GCA-2699445", "g__GCA-2699445", "s__GCA-2699445 sp022599915" ], "_genome_taxon": [ "Actinomycetia", "bacterium", "d__Bacteria", "p__Actinomycetota", "c__Actinomycetes", "o__S36-B12", "f__GCA-2699445", "g__GCA-2699445", "s__GCA-2699445 sp022599915", "Bacteria", "Actinomycetota", "Actinomycetes", "S36-B12", "GCA-2699445", "GCA-2699445", "GCA-2699445", "sp022599915" ], "_meo": [ { "id": "MEO_0002677", "label": "sponge" }, { "id": "MEO_0000087", "label": "estuary" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }