{
    "type": "genome",
    "identifier": "GCA_022600895.1",
    "organism": "Actinomycetia bacterium",
    "title": "Actinomycetia bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Uppsala University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022600895.1",
        "bioproject": "PRJNA742377",
        "biosample": "SAMN20447795",
        "wgs_master": "JAHZJN000000000.1",
        "refseq_category": "na",
        "taxid": "1883427",
        "species_taxid": "1883427",
        "organism_name": "Actinomycetia bacterium",
        "infraspecific_name": "",
        "isolate": "O_S4.1_bin.1",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/16",
        "asm_name": "ASM2260089v1",
        "submitter": "Uppsala University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/600/895/GCA_022600895.1_ASM2260089v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-16",
    "dateModified": "2022-03-16",
    "datePublished": "2022-03-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Actinomycetia bacterium"
        ],
        "sample_taxid": [
            "1883427"
        ],
        "sample_host_organism": [
            "Haliclona oculata"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Netherlands: Oosterschelde estury, Oosterschelde/East"
        ],
        "sample_host_location_id": [],
        "data_size": "0.541 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1912439",
        "Number of Sequences": "147",
        "Longest Sequences (bp)": "63570",
        "N50 (bp)": "19767",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "62.6",
        "Number of CDSs": "1791",
        "Average Protein Length": "305.1",
        "Coding Ratio (%)": "85.7",
        "Number of rRNAs": "2",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "accession": "GCA_014191495.1",
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                "species_taxid": 1036020,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Motilibacter peucedani",
                "strain": "strain=RP-AC37",
                "accession": "GCA_003634695.1",
                "taxid": 598650,
                "species_taxid": 598650,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nocardioides cynanchi",
                "strain": "strain=SB3-45",
                "accession": "GCA_008761635.1",
                "taxid": 2558918,
                "species_taxid": 2558918,
                "relation_to_type": "type",
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                "matched_fragments": 56,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "accession": "GCA_016907515.1",
                "taxid": 60489,
                "species_taxid": 60489,
                "relation_to_type": "type",
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            },
            {
                "organism_name": "Nonomuraea roseoviolacea subsp. carminata",
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                "accession": "GCA_024172185.1",
                "taxid": 160689,
                "species_taxid": 103837,
                "relation_to_type": "type",
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                "ani": 76.0777,
                "matched_fragments": 58,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptomyces violarus",
                "strain": "strain=CECT 3237",
                "accession": "GCA_014191845.1",
                "taxid": 67380,
                "species_taxid": 67380,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9488,
                "matched_fragments": 50,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptomyces albireticuli",
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                "accession": "GCA_021228125.1",
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                "species_taxid": 1940,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8919,
                "matched_fragments": 55,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomadura harenae",
                "strain": "strain=NEAU-Ht49",
                "accession": "GCA_003696215.1",
                "taxid": 2483351,
                "species_taxid": 2483351,
                "relation_to_type": "type",
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                "matched_fragments": 52,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Embleya hyalina",
                "strain": "strain=NBRC 13850",
                "accession": "GCA_003967355.1",
                "taxid": 516124,
                "species_taxid": 516124,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Herbidospora solisilvae",
                "strain": "strain=NEAU-GS84",
                "accession": "GCA_009901565.1",
                "taxid": 2696284,
                "species_taxid": 2696284,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.612,
                "matched_fragments": 55,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Planobispora takensis",
                "strain": "strain=NBRC 109077",
                "accession": "GCA_016863195.1",
                "taxid": 1367882,
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                "relation_to_type": "type",
                "validated": true,
                "ani": 75.3127,
                "matched_fragments": 56,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Embleya scabrispora",
                "strain": "strain=DSM 41855",
                "accession": "GCA_000372745.1",
                "taxid": 159449,
                "species_taxid": 159449,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2618,
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                "status": "below_threshold"
            }
        ],
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        "gtdb_result": [
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                "accession": "GCA_002729215.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__S36-B12",
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            {
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            {
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                "accession": "GCA_009699015.1",
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                "num_clustered_genomes": 2,
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        ]
    },
    "_bac2feature": {
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        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
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        "genome_size": null,
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        "gram_stain": null,
        "sporulation": null,
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        "facultative_respiration": null,
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        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
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    },
    "_gtdb_taxon": [
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        "p__Actinomycetota",
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        "f__S36-B12",
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    "_genome_taxon": [
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        "d__Bacteria",
        "p__Actinomycetota",
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        "f__S36-B12",
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    "_meo": [
        {
            "id": "MEO_0002677",
            "label": "sponge"
        },
        {
            "id": "MEO_0000087",
            "label": "estuary"
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    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}