{
    "type": "genome",
    "identifier": "GCA_022643645.1",
    "organism": "Solobacterium sp.",
    "title": "Solobacterium sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE Joint Genome Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022643645.1",
        "bioproject": "PRJNA768561",
        "biosample": "SAMN22412417",
        "wgs_master": "JALCGG000000000.1",
        "refseq_category": "na",
        "taxid": "2060878",
        "species_taxid": "2060878",
        "organism_name": "Solobacterium sp.",
        "infraspecific_name": "",
        "isolate": "UW_TS_BUL2_6",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/21",
        "asm_name": "ASM2264364v1",
        "submitter": "DOE Joint Genome Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/643/645/GCA_022643645.1_ASM2264364v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-21",
    "dateModified": "2022-03-21",
    "datePublished": "2022-03-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Solobacterium sp."
        ],
        "sample_taxid": [
            "2060878"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Madison, WI",
            "Freezer"
        ],
        "sample_host_location_id": [],
        "data_size": "0.586 MB",
        "sample_ph_range": {
            "min": 55.0,
            "max": 55.0
        },
        "sample_temperature_range": {
            "min": 35.0,
            "max": 80.0
        },
        "completeness": 96.3,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2072515",
        "Number of Sequences": "61",
        "Longest Sequences (bp)": "96755",
        "N50 (bp)": "43876",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "47.4",
        "Number of CDSs": "2012",
        "Average Protein Length": "310.2",
        "Coding Ratio (%)": "90.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "46",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Lactimicrobium massiliense",
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                "taxid": 2161814,
                "species_taxid": 2161814,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 157,
                "total_fragments": 665,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Galactobacillus timonensis",
                "strain": "strain=Marseille-P4641",
                "accession": "GCA_900240265.1",
                "taxid": 2041840,
                "species_taxid": 2041840,
                "relation_to_type": "type",
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                "ani": 77.5572,
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                "total_fragments": 665,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "gtdb_species": "s__Bulleidia sp900319505",
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                "matched_fragments": 364,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Bulleidia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.64",
                "min_intra_species_ani": "99.39",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCF_900343155.1",
                "gtdb_species": "s__Bulleidia massiliensis",
                "ani": 79.0624,
                "matched_fragments": 156,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Bulleidia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.00",
                "min_intra_species_ani": "97.48",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 18,
                "status": "-"
            },
            {
                "accession": "GCA_900315065.1",
                "gtdb_species": "s__Bulleidia sp900315065",
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                "matched_fragments": 114,
                "total_fragments": 665,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Bulleidia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.97",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_900240265.1",
                "gtdb_species": "s__Bulleidia timonensis",
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                "matched_fragments": 74,
                "total_fragments": 665,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Bulleidia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.98",
                "min_intra_species_ani": "97.48",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.75",
                "num_clustered_genomes": 11,
                "status": "-"
            },
            {
                "accession": "GCA_902786245.1",
                "gtdb_species": "s__Bulleidia sp902786245",
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                "matched_fragments": 90,
                "total_fragments": 665,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Bulleidia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009696165.1",
                "gtdb_species": "s__Bulleidia intestinalis",
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                "matched_fragments": 96,
                "total_fragments": 665,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Bulleidia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.55",
                "min_intra_species_ani": "97.14",
                "mean_intra_species_af": "0.90",
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                "num_clustered_genomes": 19,
                "status": "-"
            },
            {
                "accession": "GCA_900314345.1",
                "gtdb_species": "s__Bulleidia sp900314345",
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                "matched_fragments": 78,
                "total_fragments": 665,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Bulleidia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
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                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_012516665.1",
                "gtdb_species": "s__Bulleidia sp012516665",
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                "matched_fragments": 60,
                "total_fragments": 665,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Bulleidia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900314905.1",
                "gtdb_species": "s__Bulleidia sp900314905",
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                "matched_fragments": 93,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Bulleidia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.98",
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                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017459725.1",
                "gtdb_species": "s__Bulleidia sp017459725",
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                "matched_fragments": 77,
                "total_fragments": 665,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Bulleidia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017420585.1",
                "gtdb_species": "s__Bulleidia sp017420585",
                "ani": 76.2031,
                "matched_fragments": 62,
                "total_fragments": 665,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Bulleidia",
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                "mean_intra_species_ani": "98.75",
                "min_intra_species_ani": "98.73",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": 2174775.0,
        "gc_content": 36.77,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__Erysipelotrichales",
        "f__Erysipelotrichaceae",
        "g__Bulleidia",
        "s__Bulleidia sp022644565"
    ],
    "_genome_taxon": [
        "Solobacterium",
        "sp.",
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__Erysipelotrichales",
        "f__Erysipelotrichaceae",
        "g__Bulleidia",
        "s__Bulleidia sp022644565",
        "Bacteria",
        "Bacillota",
        "I",
        "Bacilli",
        "A",
        "Erysipelotrichales",
        "Erysipelotrichaceae",
        "Bulleidia",
        "Bulleidia",
        "sp022644565"
    ],
    "_meo": [
        {
            "id": "MEO_0000119",
            "label": "bioreactor"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}