{ "type": "genome", "identifier": "GCA_022646445.1", "organism": "Acetobacter peroxydans", "title": "Acetobacter peroxydans", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCA_022646445.1", "bioproject": "PRJNA768570", "biosample": "SAMN22412347", "wgs_master": "JALCJG000000000.1", "refseq_category": "na", "taxid": "104098", "species_taxid": "104098", "organism_name": "Acetobacter peroxydans", "infraspecific_name": "", "isolate": "UW_TS_ACET5_2", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/03/21", "asm_name": "ASM2264644v1", "submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCF_022646445.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/646/445/GCA_022646445.1_ASM2264644v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-03-21", "dateModified": "2022-03-21", "datePublished": "2022-03-21", "_annotation": { "sample_count": 1, "sample_organism": [ "Acetobacter peroxydans" ], "sample_taxid": [ "104098" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: Madison, WI", "Freezer" ], "sample_host_location_id": [], "data_size": "0.712 MB", "sample_ph_range": { "min": 5401670526.0, "max": 5401670526.0 }, "sample_temperature_range": { "min": 45.0, "max": 80.0 }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2521039", "Number of Sequences": "34", "Longest Sequences (bp)": "279520", "N50 (bp)": "102019", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "60.9", "Number of CDSs": "2299", "Average Protein Length": "326.6", "Coding Ratio (%)": "89.3", "Number of rRNAs": "0", "Number of tRNAs": "42", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Acetobacter peroxydans", "strain": "strain=NBRC 13755", "accession": "GCA_006539345.1", "taxid": 104098, "species_taxid": 104098, "relation_to_type": "type", "validated": true, "ani": 97.8521, "matched_fragments": 789, "total_fragments": 825, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Acetobacter peroxydans", "strain": "strain=LMG 1635", "accession": "GCA_011516745.1", "taxid": 104098, "species_taxid": 104098, "relation_to_type": "type", "validated": true, "ani": 97.8476, "matched_fragments": 798, "total_fragments": 825, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Acetobacter papayae", "strain": "strain=JCM 25143", "accession": 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