{
    "type": "genome",
    "identifier": "GCA_022649205.1",
    "organism": "Sporolactobacillus sp.",
    "title": "Sporolactobacillus sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE Joint Genome Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022649205.1",
        "bioproject": "PRJNA768585",
        "biosample": "SAMN22412334",
        "wgs_master": "JALCNT000000000.1",
        "refseq_category": "na",
        "taxid": "1958931",
        "species_taxid": "1958931",
        "organism_name": "Sporolactobacillus sp.",
        "infraspecific_name": "",
        "isolate": "UW_MP_SPOR1_1",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/21",
        "asm_name": "ASM2264920v1",
        "submitter": "DOE Joint Genome Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/649/205/GCA_022649205.1_ASM2264920v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-21",
    "dateModified": "2022-03-21",
    "datePublished": "2022-03-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Sporolactobacillus sp."
        ],
        "sample_taxid": [
            "1958931"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Madison, WI",
            "Freezer"
        ],
        "sample_host_location_id": [],
        "data_size": "1.036 MB",
        "sample_ph_range": {
            "min": 55.0,
            "max": 55.0
        },
        "sample_temperature_range": {
            "min": 35.0,
            "max": 80.0
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3636120",
        "Number of Sequences": "39",
        "Longest Sequences (bp)": "375434",
        "N50 (bp)": "114333",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "49.1",
        "Number of CDSs": "3403",
        "Average Protein Length": "299.7",
        "Coding Ratio (%)": "84.1",
        "Number of rRNAs": "2",
        "Number of tRNAs": "41",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Sporolactobacillus vineae",
                "strain": "strain=SL153",
                "accession": "GCA_000246965.2",
                "taxid": 444463,
                "species_taxid": 444463,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8987,
                "matched_fragments": 126,
                "total_fragments": 1194,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sporolactobacillus vineae",
                "strain": "strain=DSM 21990",
                "accession": "GCA_000377985.1",
                "taxid": 444463,
                "species_taxid": 444463,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8596,
                "matched_fragments": 129,
                "total_fragments": 1194,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sporolactobacillus pectinivorans",
                "strain": "strain=GD201205",
                "accession": "GCA_002802965.1",
                "taxid": 1591408,
                "species_taxid": 1591408,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.852,
                "matched_fragments": 113,
                "total_fragments": 1194,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sporolactobacillus shoreicorticis",
                "strain": "strain=LMG 29111",
                "accession": "GCA_024125445.1",
                "taxid": 1923877,
                "species_taxid": 1923877,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7327,
                "matched_fragments": 87,
                "total_fragments": 1194,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sporolactobacillus spathodeae",
                "strain": "strain=DSM 100968",
                "accession": "GCA_016908935.1",
                "taxid": 1465502,
                "species_taxid": 1465502,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.418,
                "matched_fragments": 66,
                "total_fragments": 1194,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sporolactobacillus shoreae",
                "strain": "strain=BK92",
                "accession": "GCA_004684935.1",
                "taxid": 1465501,
                "species_taxid": 1465501,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2426,
                "matched_fragments": 102,
                "total_fragments": 1194,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900543345.1",
                "gtdb_species": "s__Sporolactobacillus sp900543345",
                "ani": 98.5111,
                "matched_fragments": 707,
                "total_fragments": 1194,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_G;f__Sporolactobacillaceae;g__Sporolactobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCF_004153195.1",
                "gtdb_species": "s__Sporolactobacillus sp004153195",
                "ani": 76.9399,
                "matched_fragments": 90,
                "total_fragments": 1194,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_G;f__Sporolactobacillaceae;g__Sporolactobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002802965.1",
                "gtdb_species": "s__Sporolactobacillus pectinivorans",
                "ani": 76.874,
                "matched_fragments": 112,
                "total_fragments": 1194,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_G;f__Sporolactobacillaceae;g__Sporolactobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000377985.1",
                "gtdb_species": "s__Sporolactobacillus vineae",
                "ani": 76.8399,
                "matched_fragments": 128,
                "total_fragments": 1194,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_G;f__Sporolactobacillaceae;g__Sporolactobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.97",
                "min_intra_species_ani": "99.97",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_004153225.1",
                "gtdb_species": "s__Sporolactobacillus sp004153225",
                "ani": 76.8095,
                "matched_fragments": 93,
                "total_fragments": 1194,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_G;f__Sporolactobacillaceae;g__Sporolactobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_016908935.1",
                "gtdb_species": "s__Sporolactobacillus spathodeae",
                "ani": 76.418,
                "matched_fragments": 66,
                "total_fragments": 1194,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_G;f__Sporolactobacillaceae;g__Sporolactobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004684935.1",
                "gtdb_species": "s__Sporolactobacillus shoreae",
                "ani": 76.2426,
                "matched_fragments": 102,
                "total_fragments": 1194,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_G;f__Sporolactobacillaceae;g__Sporolactobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.271,
        "cell_length": 0.314,
        "doubling_h": null,
        "growth_tmp": 30.857,
        "optimum_tmp": 36.6,
        "optimum_ph": 5.625,
        "genome_size": 3241710.4,
        "gc_content": 45.042,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 1.0,
        "sporulation": 1.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 0.142,
        "anaerobic_respiration": 0.285,
        "aerobic_respiration": 0.571,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota",
        "c__Bacilli",
        "o__Bacillales_K",
        "f__Sporolactobacillaceae",
        "g__Sporolactobacillus",
        "s__Sporolactobacillus sp900543345"
    ],
    "_genome_taxon": [
        "Sporolactobacillus",
        "sp.",
        "d__Bacteria",
        "p__Bacillota",
        "c__Bacilli",
        "o__Bacillales_K",
        "f__Sporolactobacillaceae",
        "g__Sporolactobacillus",
        "s__Sporolactobacillus sp900543345",
        "Bacteria",
        "Bacillota",
        "Bacilli",
        "Bacillales",
        "K",
        "Sporolactobacillaceae",
        "Sporolactobacillus",
        "Sporolactobacillus",
        "sp900543345"
    ],
    "_meo": [
        {
            "id": "MEO_0000119",
            "label": "bioreactor"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}