{ "type": "genome", "identifier": "GCA_022652485.1", "organism": "Sphingobium sp.", "title": "Sphingobium sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCA_022652485.1", "bioproject": "PRJNA768592", "biosample": "SAMN22412333", "wgs_master": "JALCRK000000000.1", "refseq_category": "na", "taxid": "1912891", "species_taxid": "1912891", "organism_name": "Sphingobium sp.", "infraspecific_name": "", "isolate": "UW_MP_SPHING1_2", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/03/21", "asm_name": "ASM2265248v1", "submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/652/485/GCA_022652485.1_ASM2265248v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-03-21", "dateModified": "2022-03-21", "datePublished": "2022-03-21", "_annotation": { "sample_count": 1, "sample_organism": [ "Sphingobium sp." ], "sample_taxid": [ "1912891" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: Madison, WI", "Freezer" ], "sample_host_location_id": [], "data_size": "0.857 MB", "sample_ph_range": { "min": 55.0, "max": 55.0 }, "sample_temperature_range": { "min": 35.0, "max": 80.0 }, "completeness": 87.5, "contamination": 2.6, "strain_heterogeneity": 50.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3058624", "Number of Sequences": "62", "Longest Sequences (bp)": "184371", "N50 (bp)": "62271", "Gap Ratio (%)": "0.000000", 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"total_fragments": 983, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium phenoxybenzoativorans", "strain": "strain=SC_3", "accession": "GCA_001757355.1", "taxid": 1592790, "species_taxid": 1592790, "relation_to_type": "type", "validated": true, "ani": 79.1516, "matched_fragments": 357, "total_fragments": 983, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium terrigena", "strain": "strain=EO9", "accession": "GCA_003591655.1", "taxid": 2304063, "species_taxid": 2304063, "relation_to_type": "type", "validated": true, "ani": 79.0665, "matched_fragments": 370, "total_fragments": 983, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium ummariense", "strain": "strain=RL-3", "accession": "GCA_000447205.1", "taxid": 420994, "species_taxid": 420994, "relation_to_type": "type", "validated": true, "ani": 79.0637, "matched_fragments": 365, "total_fragments": 983, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium chungbukense", "strain": "strain=DJ77", "accession": "GCA_001005725.1", "taxid": 56193, "species_taxid": 56193, "relation_to_type": "type", "validated": true, "ani": 78.9155, "matched_fragments": 364, "total_fragments": 983, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium xanthum", "strain": "strain=NL9", "accession": "GCA_019737615.1", "taxid": 1387165, "species_taxid": 1387165, "relation_to_type": "type", "validated": true, "ani": 78.8769, "matched_fragments": 329, "total_fragments": 983, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium quisquiliarum", "strain": "strain=P25", "accession": "GCA_000445065.1", "taxid": 538379, "species_taxid": 538379, "relation_to_type": "type", "validated": true, "ani": 78.7221, "matched_fragments": 336, "total_fragments": 983, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium chlorophenolicum", "strain": "strain=NBRC 16172", "accession": "GCA_001598515.1", "taxid": 46429, "species_taxid": 46429, "relation_to_type": "type", "validated": true, "ani": 78.6724, "matched_fragments": 335, "total_fragments": 983, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium chlorophenolicum", "strain": "strain=NBRC 16172", "accession": "GCA_000722875.1", "taxid": 46429, "species_taxid": 46429, "relation_to_type": "type", "validated": true, "ani": 78.6324, "matched_fragments": 351, "total_fragments": 983, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas baiyangensis", "strain": "strain=L-1-4 w-11", "accession": "GCA_005144715.1", "taxid": 2572576, "species_taxid": 2572576, "relation_to_type": "type", "validated": true, "ani": 78.1545, "matched_fragments": 279, "total_fragments": 983, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingosinicella ginsenosidimutans", "strain": "strain=BS-11", 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