{
    "type": "genome",
    "identifier": "GCA_022704365.1",
    "organism": "Synergistota bacterium",
    "title": "Synergistota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Illinois at Urbana-Champaign",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022704365.1",
        "bioproject": "PRJNA797469",
        "biosample": "SAMN25010536",
        "wgs_master": "JAKJGM000000000.1",
        "refseq_category": "na",
        "taxid": "2268202",
        "species_taxid": "2268202",
        "organism_name": "Synergistota bacterium",
        "infraspecific_name": "",
        "isolate": "UR.bin157",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/28",
        "asm_name": "ASM2270436v1",
        "submitter": "University of Illinois at Urbana-Champaign",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/704/365/GCA_022704365.1_ASM2270436v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-28",
    "dateModified": "2022-03-28",
    "datePublished": "2022-03-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Synergistota bacterium"
        ],
        "sample_taxid": [
            "2268202"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Urbana"
        ],
        "sample_host_location_id": [],
        "data_size": "0.482 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1710346",
        "Number of Sequences": "24",
        "Longest Sequences (bp)": "159932",
        "N50 (bp)": "116650",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "60.1",
        "Number of CDSs": "1610",
        "Average Protein Length": "320.3",
        "Coding Ratio (%)": "90.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "42",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002070395.1",
                "gtdb_species": "s__58-81 sp002070395",
                "ani": 99.9344,
                "matched_fragments": 536,
                "total_fragments": 558,
                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Thermovirgaceae;g__58-81",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.80",
                "min_intra_species_ani": "99.72",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCA_012523215.1",
                "gtdb_species": "s__58-81 sp012523215",
                "ani": 83.8698,
                "matched_fragments": 252,
                "total_fragments": 558,
                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Thermovirgaceae;g__58-81",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001509095.1",
                "gtdb_species": "s__58-81 sp001509095",
                "ani": 78.8926,
                "matched_fragments": 176,
                "total_fragments": 558,
                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Thermovirgaceae;g__58-81",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.51",
                "min_intra_species_ani": "97.39",
                "mean_intra_species_af": "0.78",
                "min_intra_species_af": "0.69",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_012729145.1",
                "gtdb_species": "s__58-81 sp012729145",
                "ani": 78.7491,
                "matched_fragments": 245,
                "total_fragments": 558,
                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Thermovirgaceae;g__58-81",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.73",
                "min_intra_species_ani": "99.73",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002383685.1",
                "gtdb_species": "s__UBA4066 sp002383685",
                "ani": 77.3061,
                "matched_fragments": 146,
                "total_fragments": 558,
                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Thermovirgaceae;g__UBA4066",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.63",
                "min_intra_species_ani": "99.33",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_002382605.1",
                "gtdb_species": "s__UBA2252 sp002382605",
                "ani": 76.7323,
                "matched_fragments": 56,
                "total_fragments": 558,
                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Thermovirgaceae;g__UBA2252",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.04",
                "min_intra_species_ani": "98.62",
                "mean_intra_species_af": "0.78",
                "min_intra_species_af": "0.74",
                "num_clustered_genomes": 4,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Synergistota",
        "c__Synergistia",
        "o__Synergistales",
        "f__Thermovirgaceae",
        "g__58-81",
        "s__58-81 sp002070395"
    ],
    "_genome_taxon": [
        "Synergistota",
        "bacterium",
        "d__Bacteria",
        "p__Synergistota",
        "c__Synergistia",
        "o__Synergistales",
        "f__Thermovirgaceae",
        "g__58-81",
        "s__58-81 sp002070395",
        "Bacteria",
        "Synergistota",
        "Synergistia",
        "Synergistales",
        "Thermovirgaceae",
        "58-81",
        "58-81",
        "sp002070395"
    ],
    "_meo": [
        {
            "id": "MEO_0001192",
            "label": "anaerobic digester"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}