{
    "type": "genome",
    "identifier": "GCA_022706605.1",
    "organism": "Bacillota bacterium",
    "title": "Bacillota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Illinois at Urbana-Champaign",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022706605.1",
        "bioproject": "PRJNA797469",
        "biosample": "SAMN25010477",
        "wgs_master": "JAKJCF000000000.1",
        "refseq_category": "na",
        "taxid": "1879010",
        "species_taxid": "1879010",
        "organism_name": "Bacillota bacterium",
        "infraspecific_name": "",
        "isolate": "UR.bin103",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/28",
        "asm_name": "ASM2270660v1",
        "submitter": "University of Illinois at Urbana-Champaign",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/706/605/GCA_022706605.1_ASM2270660v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-28",
    "dateModified": "2022-03-28",
    "datePublished": "2022-03-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacillota bacterium"
        ],
        "sample_taxid": [
            "1879010"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Urbana"
        ],
        "sample_host_location_id": [],
        "data_size": "0.505 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 58.33,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1780404",
        "Number of Sequences": "221",
        "Longest Sequences (bp)": "63924",
        "N50 (bp)": "14603",
        "Gap Ratio (%)": "0.109189",
        "GCcontent (%)": "34.9",
        "Number of CDSs": "1564",
        "Average Protein Length": "297.5",
        "Coding Ratio (%)": "78.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "13",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Sedimentibacter saalensis",
                "strain": "strain=DSM 13558",
                "accession": "GCA_007830175.1",
                "taxid": 130788,
                "species_taxid": 130788,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7389,
                "matched_fragments": 122,
                "total_fragments": 485,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sedimentibacter hydroxybenzoicus",
                "strain": "strain=DSM 7310",
                "accession": "GCA_013403245.1",
                "taxid": 29345,
                "species_taxid": 29345,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7226,
                "matched_fragments": 124,
                "total_fragments": 485,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sedimentibacter acidaminivorans",
                "strain": "strain=DSM 24004",
                "accession": "GCA_017873955.1",
                "taxid": 913099,
                "species_taxid": 913099,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4656,
                "matched_fragments": 56,
                "total_fragments": 485,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 58.33,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_003483345.1",
                "gtdb_species": "s__Sedimentibacter sp003483345",
                "ani": 97.8508,
                "matched_fragments": 308,
                "total_fragments": 485,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Tissierellales;f__Sedimentibacteraceae;g__Sedimentibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.32",
                "min_intra_species_ani": "97.20",
                "mean_intra_species_af": "0.62",
                "min_intra_species_af": "0.58",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCA_003487955.1",
                "gtdb_species": "s__Sedimentibacter sp003487955",
                "ani": 85.6003,
                "matched_fragments": 314,
                "total_fragments": 485,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Tissierellales;f__Sedimentibacteraceae;g__Sedimentibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_012519555.1",
                "gtdb_species": "s__Sedimentibacter sp012519555",
                "ani": 83.4551,
                "matched_fragments": 321,
                "total_fragments": 485,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Tissierellales;f__Sedimentibacteraceae;g__Sedimentibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017995755.1",
                "gtdb_species": "s__Sedimentibacter sp017995755",
                "ani": 81.6848,
                "matched_fragments": 263,
                "total_fragments": 485,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Tissierellales;f__Sedimentibacteraceae;g__Sedimentibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_012520455.1",
                "gtdb_species": "s__Sedimentibacter sp012520455",
                "ani": 80.1802,
                "matched_fragments": 272,
                "total_fragments": 485,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Tissierellales;f__Sedimentibacteraceae;g__Sedimentibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002316585.1",
                "gtdb_species": "s__Sedimentibacter sp002316585",
                "ani": 79.8372,
                "matched_fragments": 184,
                "total_fragments": 485,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Tissierellales;f__Sedimentibacteraceae;g__Sedimentibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002316225.1",
                "gtdb_species": "s__Sedimentibacter sp002316225",
                "ani": 79.6353,
                "matched_fragments": 228,
                "total_fragments": 485,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Tissierellales;f__Sedimentibacteraceae;g__Sedimentibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.05",
                "min_intra_species_ani": "99.05",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Tissierellales",
        "f__Sedimentibacteraceae",
        "g__Sedimentibacter",
        "s__Sedimentibacter sp003483345"
    ],
    "_genome_taxon": [
        "Bacillota",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Tissierellales",
        "f__Sedimentibacteraceae",
        "g__Sedimentibacter",
        "s__Sedimentibacter sp003483345",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Tissierellales",
        "Sedimentibacteraceae",
        "Sedimentibacter",
        "Sedimentibacter",
        "sp003483345"
    ],
    "_meo": [
        {
            "id": "MEO_0001192",
            "label": "anaerobic digester"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}