{
    "type": "genome",
    "identifier": "GCA_022716255.1",
    "organism": "Phocaeicola dorei",
    "title": "Phocaeicola dorei",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Georgia Institute of Technology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022716255.1",
        "bioproject": "PRJNA747761",
        "biosample": "SAMN20301048",
        "wgs_master": "JAIIDF000000000.1",
        "refseq_category": "na",
        "taxid": "357276",
        "species_taxid": "357276",
        "organism_name": "Phocaeicola dorei",
        "infraspecific_name": "",
        "isolate": "Map_110_002",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/28",
        "asm_name": "ASM2271625v1",
        "submitter": "Georgia Institute of Technology",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/716/255/GCA_022716255.1_ASM2271625v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-28",
    "dateModified": "2022-03-28",
    "datePublished": "2022-03-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Phocaeicola dorei"
        ],
        "sample_taxid": [
            "357276"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Mozambique"
        ],
        "sample_host_location_id": [],
        "data_size": "1.476 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "5153052",
        "Number of Sequences": "223",
        "Longest Sequences (bp)": "286865",
        "N50 (bp)": "81994",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "41.7",
        "Number of CDSs": "3915",
        "Average Protein Length": "378.0",
        "Coding Ratio (%)": "86.2",
        "Number of rRNAs": "3",
        "Number of tRNAs": "60",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "relation_to_type": "type",
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                "matched_fragments": 1455,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Phocaeicola dorei",
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                "species_taxid": 357276,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1457,
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                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Phocaeicola dorei",
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                "accession": "GCA_013009555.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Phocaeicola vulgatus",
                "strain": "strain=FDAARGOS_1098",
                "accession": "GCA_016766915.1",
                "taxid": 821,
                "species_taxid": 821,
                "relation_to_type": "type",
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                "ani": 95.4194,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Phocaeicola vulgatus",
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                "accession": "GCA_000012825.1",
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                "species_taxid": 821,
                "relation_to_type": "type",
                "validated": true,
                "ani": 95.3949,
                "matched_fragments": 1261,
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                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Phocaeicola sartorii",
                "strain": "strain=DSM 21941",
                "accession": "GCA_024622025.1",
                "taxid": 671267,
                "species_taxid": 671267,
                "relation_to_type": "type",
                "validated": true,
                "ani": 89.8939,
                "matched_fragments": 1078,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides eggerthii",
                "strain": "strain=DSM 20697",
                "accession": "GCA_025146565.1",
                "taxid": 28111,
                "species_taxid": 28111,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.1217,
                "matched_fragments": 203,
                "total_fragments": 1614,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Phocaeicola faecalis",
                "strain": "strain=FXJYN30E22",
                "accession": "GCA_021730445.1",
                "taxid": 2786956,
                "species_taxid": 2786956,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.6714,
                "matched_fragments": 575,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides thetaiotaomicron",
                "strain": "strain=VPI 5482",
                "accession": "GCA_022453665.1",
                "taxid": 818,
                "species_taxid": 818,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8511,
                "matched_fragments": 241,
                "total_fragments": 1614,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 4.17,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_013009555.1",
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                "matched_fragments": 1464,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Phocaeicola",
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                "min_intra_species_ani": "97.27",
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                "num_clustered_genomes": 104,
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            },
            {
                "accession": "GCF_000012825.1",
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                "matched_fragments": 1260,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Phocaeicola",
                "ani_circumscription_radius": 95.359,
                "mean_intra_species_ani": "98.84",
                "min_intra_species_ani": "95.43",
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                "num_clustered_genomes": 263,
                "status": "inconclusive"
            },
            {
                "accession": "GCA_900760795.1",
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                "matched_fragments": 774,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Phocaeicola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_000614185.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Phocaeicola",
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            },
            {
                "accession": "GCA_011959205.1",
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            },
            {
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            },
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        ]
    },
    "_bac2feature": {
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        "cell_diameter": -0.523,
        "cell_length": -0.523,
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        "genome_size": 2530631.0,
        "gc_content": null,
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        "rRNA16S_genes": null,
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        "gram_stain": 0.0,
        "sporulation": 0.0,
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        "range_salinity": null,
        "facultative_respiration": 0.0,
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        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": 0.0,
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        "coccobacillus_cell_shape": 0.0,
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    "_gtdb_taxon": [
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        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__Phocaeicola",
        "s__Phocaeicola dorei"
    ],
    "_genome_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__Phocaeicola",
        "s__Phocaeicola dorei",
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        "Bacteroidota",
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        "Bacteroidales",
        "Bacteroidaceae",
        "Phocaeicola",
        "Phocaeicola",
        "dorei"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}