{
    "type": "genome",
    "identifier": "GCA_022722785.1",
    "organism": "Clostridiales bacterium",
    "title": "Clostridiales bacterium",
    "description": "derived from metagenome; fragmented assembly; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Georgia Institute of Technology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022722785.1",
        "bioproject": "PRJNA747761",
        "biosample": "SAMN20301919",
        "wgs_master": "JAIJKR000000000.1",
        "refseq_category": "na",
        "taxid": "1898207",
        "species_taxid": "1898207",
        "organism_name": "Clostridiales bacterium",
        "infraspecific_name": "",
        "isolate": "Map_6_010",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/28",
        "asm_name": "ASM2272278v1",
        "submitter": "Georgia Institute of Technology",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/722/785/GCA_022722785.1_ASM2272278v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-28",
    "dateModified": "2022-03-28",
    "datePublished": "2022-03-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Clostridiales bacterium"
        ],
        "sample_taxid": [
            "1898207"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Mozambique"
        ],
        "sample_host_location_id": [],
        "data_size": "0.849 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 89.58,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2944008",
        "Number of Sequences": "1108",
        "Longest Sequences (bp)": "69943",
        "N50 (bp)": "3392",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "40.1",
        "Number of CDSs": "1892",
        "Average Protein Length": "274.3",
        "Coding Ratio (%)": "52.9",
        "Number of rRNAs": "2",
        "Number of tRNAs": "36",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Eubacterium coprostanoligenes",
                "strain": "strain=ATCC 51222",
                "accession": "GCA_900167205.1",
                "taxid": 290054,
                "species_taxid": 290054,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.531,
                "matched_fragments": 100,
                "total_fragments": 430,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 89.58,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_000436835.1",
                "gtdb_species": "s__Eubacterium_R sp000436835",
                "ani": 97.2789,
                "matched_fragments": 259,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.32",
                "min_intra_species_ani": "97.52",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 14,
                "status": "conclusive"
            },
            {
                "accession": "GCA_000434995.1",
                "gtdb_species": "s__Eubacterium_R sp000434995",
                "ani": 83.7014,
                "matched_fragments": 221,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.46",
                "min_intra_species_ani": "98.20",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 9,
                "status": "-"
            },
            {
                "accession": "GCA_900540235.1",
                "gtdb_species": "s__Eubacterium_R sp900540235",
                "ani": 82.6913,
                "matched_fragments": 219,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.09",
                "min_intra_species_ani": "96.24",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_900767025.1",
                "gtdb_species": "s__Eubacterium_R sp900767025",
                "ani": 79.4445,
                "matched_fragments": 116,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_910577195.1",
                "gtdb_species": "s__Eubacterium_R sp910577195",
                "ani": 79.2923,
                "matched_fragments": 119,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.35",
                "min_intra_species_ani": "96.35",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900764665.1",
                "gtdb_species": "s__Eubacterium_R sp900764665",
                "ani": 78.7042,
                "matched_fragments": 79,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009774735.1",
                "gtdb_species": "s__Eubacterium_R sp009774735",
                "ani": 78.5317,
                "matched_fragments": 99,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.57",
                "min_intra_species_ani": "98.57",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002493325.1",
                "gtdb_species": "s__Eubacterium_R sp002493325",
                "ani": 78.2372,
                "matched_fragments": 108,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.54",
                "min_intra_species_ani": "97.36",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_003526845.1",
                "gtdb_species": "s__Eubacterium_R sp003526845",
                "ani": 78.2038,
                "matched_fragments": 105,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.76",
                "min_intra_species_ani": "98.46",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
                "accession": "GCA_002493595.1",
                "gtdb_species": "s__Eubacterium_R sp002493595",
                "ani": 78.1722,
                "matched_fragments": 87,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.23,
        "cell_length": 0.351,
        "doubling_h": 0.36,
        "growth_tmp": 38.862,
        "optimum_tmp": 40.922,
        "optimum_ph": 6.957,
        "genome_size": 3719026.467,
        "gc_content": 40.959,
        "coding_genes": 3326.141,
        "rRNA16S_genes": 7.062,
        "tRNA_genes": 67.767,
        "gram_stain": 0.857,
        "sporulation": 0.615,
        "motility": 0.653,
        "range_salinity": 0.19,
        "facultative_respiration": 0.009,
        "anaerobic_respiration": 0.968,
        "aerobic_respiration": 0.021,
        "mesophilic_range_tmp": 0.809,
        "thermophilic_range_tmp": 0.154,
        "psychrophilic_range_tmp": 0.036,
        "bacillus_cell_shape": 0.897,
        "coccus_cell_shape": 0.08,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.01,
        "vibrio_cell_shape": 0.01,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Acutalibacteraceae",
        "g__Eubacterium_R",
        "s__Eubacterium_R sp000436835"
    ],
    "_genome_taxon": [
        "Clostridiales",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Acutalibacteraceae",
        "g__Eubacterium_R",
        "s__Eubacterium_R sp000436835",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Oscillospirales",
        "Acutalibacteraceae",
        "Eubacterium",
        "R",
        "Eubacterium",
        "R",
        "sp000436835"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}