# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_4	LOCUS_00040	sequence001:3310..4371(+)	partial			WP_000097342.1	D-lactate dehydrogenase	99.4	61.5	96.9
MGA_61	LOCUS_00610	sequence001:66849..67097(-)	frameshift		67243	WP_000554226.1	autotransporter YejO	89.0	8.5	94.5
MGA_62	LOCUS_00620	sequence001:67100..67489(-)	frameshift,internal_stop_codon	67598..67600(-)	67243	WP_000554210.1	autotransporter YejO	43.4	6.5	85.7
MGA_63	LOCUS_00630	sequence001:67598..67801(-)	internal_stop_codon	67598..67600(-)		WP_000554226.1	autotransporter YejO	100.0	7.8	97.0
MGA_69	LOCUS_00690	sequence001:72822..73031(-)	partial			WP_000186540.1	heme exporter protein CcmD	72.5	72.5	82.0
MGA_83	LOCUS_00830	sequence001:86221..86955(-)	partial			WP_000786370.1	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	100.0	68.9	95.5
MGA_90	LOCUS_00900	sequence001:96989..97426(+)	frameshift		97384	WP_000559134.1	two-component system sensor histidine kinase AtoS	91.0	21.7	100.0
MGA_91	LOCUS_00910	sequence001:97413..98765(+)	frameshift		97375	WP_001296244.1	two-component system sensor histidine kinase AtoS	100.0	74.0	98.0
MGA_104	LOCUS_01040	sequence001:117325..117933(-)	internal_stop_codon	117952..117954(-)		WP_001220090.1	AIDA-I family autotransporter adhesin YfaL/EhaC	100.0	16.1	96.5
MGA_105	LOCUS_01050	sequence001:117952..119511(-)	internal_stop_codon	119797..119799(-),117952..117954(-),119566..119568(-)		WP_001220090.1	AIDA-I family autotransporter adhesin YfaL/EhaC	100.0	41.5	91.6
MGA_106	LOCUS_01060	sequence001:119566..119760(-)	internal_stop_codon	119797..119799(-),119566..119568(-)		WP_046083384.1	AIDA-I family autotransporter adhesin YfaL/EhaC	100.0	5.1	98.4
MGA_107	LOCUS_01070	sequence001:119797..120924(-)	internal_stop_codon	119797..119799(-),119566..119568(-)		WP_046083384.1	AIDA-I family autotransporter adhesin YfaL/EhaC	100.0	29.9	95.2
MGA_119	LOCUS_01190	sequence001:135312..135923(-)	internal_stop_codon	135993..135995(-)		WP_001361552.1	MFS transporter	100.0	47.3	91.6
MGA_120	LOCUS_01200	sequence001:135993..136601(-)	internal_stop_codon	135993..135995(-)		WP_001297939.1	MFS transporter	100.0	47.1	99.5
MGA_134	LOCUS_01340	sequence001:149721..149930(-)	frameshift		149973	WP_001297897.1	signal transduction protein PmrD	100.0	78.4	100.0
MGA_163	LOCUS_01630	sequence002:6233..6658(+)	partial			WP_000041588.1	zinc resistance sensor/chaperone ZraP	84.4	63.3	97.5
MGA_231	LOCUS_02310	sequence002:72807..73292(-)	partial			WP_001308094.1	shikimate kinase AroK	100.0	67.1	100.0
MGA_270	LOCUS_02700	sequence002:120242..120724(-)	frameshift		120750	WP_001181201.1	PstS family phosphate ABC transporter substrate-binding protein	98.8	31.5	95.6
MGA_271	LOCUS_02710	sequence002:120736..121746(-)	frameshift		120750	WP_061090571.1	PstS family phosphate ABC transporter substrate-binding protein	98.8	65.9	86.1
MGA_310	LOCUS_03090	sequence003:285..434(+)	frameshift		407	WP_000465919.1	fimbrial chaperone	87.8	17.5	93.0
MGA_311	LOCUS_03100	sequence003:448..1026(+)	frameshift		407	WP_000465919.1	fimbrial chaperone	100.0	78.0	97.9
MGA_313	LOCUS_03120	sequence003:3666..3857(+)	internal_stop_codon	3855..3857(+)		WP_000591066.1	fimbrial protein	100.0	33.5	96.8
MGA_314	LOCUS_03130	sequence003:3858..4232(+)	internal_stop_codon	3855..3857(+)		WP_000591066.1	fimbrial protein	100.0	66.0	96.0
MGA_316	LOCUS_03150	sequence003:6114..6791(+)	frameshift		6030	WP_000846620.1	fimbrial-like adhesin	100.0	53.1	93.3
MGA_432	LOCUS_04310	sequence003:141165..141527(-)	frameshift		141528	WP_000494928.1	hypothetical protein	100.0	28.6	100.0
MGA_433	LOCUS_04320	sequence003:141520..142077(-)	frameshift		141528	WP_000494928.1	hypothetical protein	98.9	43.7	99.5
MGA_454	LOCUS_04530	sequence004:11434..11742(-)	frameshift		11475,11788	WP_001350488.1	site-specific integrase	97.1	25.6	82.8
MGA_455	LOCUS_04540	sequence004:11762..12061(-)	frameshift		11788	WP_001350488.1	site-specific integrase	91.9	23.5	80.2
MGA_519	LOCUS_05180	sequence004:85279..85467(-)	partial			WP_011069282.1	YbeF family transcriptional regulator	82.3	19.2	94.1
MGA_554	LOCUS_05530	sequence004:124662..124898(-)	partial			WP_000109429.1	exo-alpha-sialidase	100.0	20.1	98.7
MGA_557	LOCUS_05540	sequence005:800..1375(-)	frameshift,internal_stop_codon	511..513(-)	801,1446	WP_003147159.1	IS110-like element ISPa11 family transposase	98.4	56.2	52.1
MGA_567	LOCUS_05640	sequence005:11556..11915(-)	frameshift		11908	WP_000189209.1	cysteine/O-acetylserine transporter	98.3	60.0	100.0
MGA_605	LOCUS_06020	sequence005:57009..57536(-)	frameshift		57556	WP_001207718.1	alpha/beta hydrolase	100.0	61.6	98.9
MGA_631	LOCUS_06280	sequence005:89840..92071(+)	partial			WP_000109691.1	DUF823 domain-containing adhesin	88.3	23.1	35.1
MGA_644	LOCUS_06410	sequence005:101702..102523(-)	partial			WP_000105143.1	exodeoxyribonuclease VIII	98.2	30.9	46.6
MGA_653	LOCUS_06500	sequence005:106585..106998(+)	partial			WP_000206047.1	ead/Ea22-like family protein	65.0	36.9	86.5
MGA_658	LOCUS_06540	sequence006:4996..5307(+)	frameshift,internal_stop_codon	5305..5307(+)	5415	WP_000343760.1	ISL3-like element ISKox3 family transposase	99.0	25.1	83.3
MGA_659	LOCUS_06550	sequence006:5432..5623(+)	frameshift,internal_stop_codon	5382..5384(+)	5418,5390	WP_011114723.1	transposase	100.0	50.8	90.5
MGA_689	LOCUS_06850	sequence006:34485..34895(+)	partial			WP_000812746.1	protein-serine/threonine phosphatase	100.0	62.4	100.0
MGA_723	LOCUS_07190	sequence006:70435..70605(-)	partial			WP_000978495.1	multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase	92.9	14.4	90.4
MGA_732	LOCUS_07280	sequence006:76458..76892(+)	partial			WP_000972260.1	DNA-binding transcriptional regulator NimR	100.0	52.7	98.6
MGA_816	LOCUS_08120	sequence007:71284..75390(-)	partial			WP_000077098.1	DNA translocase FtsK	38.0	38.5	98.8
MGA_963	LOCUS_09570	sequence009:39300..40844(+)	internal_stop_codon	40842..40844(+)		WP_003112509.1	hypothetical protein	99.8	67.7	40.6
MGA_964	LOCUS_09580	sequence009:40884..41606(+)	internal_stop_codon	40842..40844(+)		WP_003112509.1	hypothetical protein	97.9	30.2	39.7
MGA_1012	LOCUS_10060	sequence009:91726..92286(-)	partial			WP_000105536.1	hypothetical protein	100.0	49.7	98.9
MGA_1046	LOCUS_10400	sequence010:30658..32544(+)	partial			WP_011035470.1	site-specific DNA-methyltransferase	71.2	77.5	42.6
MGA_1050	LOCUS_10440	sequence010:37794..39314(+)	partial			WP_106726897.1	Ti-type conjugative transfer relaxase TraA	38.3	19.7	42.4
MGA_1102	LOCUS_10960	sequence011:177..725(+)	partial			WP_000004065.1	taurine dioxygenase	100.0	64.3	98.9
MGA_1148	LOCUS_11420	sequence011:47808..47966(-)	internal_stop_codon	47967..47969(-)		WP_001199836.1	1-deoxyxylulose-5-phosphate synthase YajO	100.0	16.0	98.1
MGA_1149	LOCUS_11430	sequence011:47967..48782(-)	internal_stop_codon	47967..47969(-)		WP_001199788.1	1-deoxyxylulose-5-phosphate synthase YajO	100.0	83.6	98.9
MGA_1185	LOCUS_11780	sequence012:240..725(+)	partial			WP_181672444.1	ead/Ea22-like family protein	73.3	54.6	81.4
MGA_1262	LOCUS_12550	sequence012:73704..73856(+)	frameshift		73729	WP_005048789.1	peroxide/acid resistance protein YodD	84.0	56.0	92.9
MGA_1264	LOCUS_12570	sequence012:74966..75214(-)	frameshift		75378	WP_012602279.1	cellulose biosynthesis regulator diguanylate cyclase DgcQ	100.0	14.5	98.8
MGA_1265	LOCUS_12580	sequence012:75274..76641(-)	frameshift		75378	WP_001350521.1	cellulose biosynthesis regulator diguanylate cyclase DgcQ	93.2	75.2	96.7
MGA_1283	LOCUS_12750	sequence013:7097..7426(-)	partial			WP_000819733.1	DDRRRQL repeat protein YjdP	56.0	56.0	88.5
MGA_1300	LOCUS_12910	sequence013:27418..27996(+)	internal_stop_codon	27328..27330(+)		WP_001131974.1	ABC transporter permease	100.0	69.3	89.6
MGA_1303	LOCUS_12940	sequence013:29648..30127(+)	internal_stop_codon	30125..30127(+)		WP_000719886.1	Sel1 family TPR-like repeat protein YjcO	100.0	69.4	100.0
MGA_1304	LOCUS_12950	sequence013:30188..30316(+)	internal_stop_codon	30125..30127(+)		WP_001296650.1	Sel1 family TPR-like repeat protein YjcO	100.0	18.3	100.0
MGA_1443	LOCUS_14330	sequence015:38298..38540(+)	internal_stop_codon	38538..38540(+)		WP_001272410.1	fimbrial protein	100.0	22.7	95.0
MGA_1486	LOCUS_14760	sequence016:10526..10990(+)	internal_stop_codon	10988..10990(+)		WP_001226994.1	glucuronide uptake porin UidC	100.0	36.6	98.7
MGA_1487	LOCUS_14770	sequence016:11030..11779(+)	internal_stop_codon	10988..10990(+)		WP_001226994.1	glucuronide uptake porin UidC	100.0	59.1	100.0
MGA_1589	LOCUS_15790	sequence017:40529..43369(-)	frameshift,internal_stop_codon	43405..43407(-)	43410,43413,43416,43401,43419	WP_001033293.1	YadA-like family protein	99.2	55.3	77.9
MGA_1590	LOCUS_15800	sequence017:43720..44637(-)	internal_stop_codon	43720..43722(-)		WP_001033293.1	YadA-like family protein	100.0	18.5	87.5
MGA_1591	LOCUS_15810	sequence017:44681..45019(-)	internal_stop_codon	45176..45178(-)		WP_001052540.1	DUF3251 domain-containing protein	100.0	49.3	95.5
MGA_1610	LOCUS_16000	sequence017:65808..66572(-)	frameshift		66696	WP_000153839.1	2,3-diketo-L-gulonate transporter large permease YiaN	100.0	59.8	98.4
MGA_1623	LOCUS_16120	sequence018:2840..2992(+)	internal_stop_codon	2990..2992(+)		WP_001273738.1	galactarate dehydratase	100.0	9.6	100.0
MGA_1696	LOCUS_16850	sequence019:84..440(-)	partial			WP_000804912.1	L-tartrate/succinate antiporter	98.3	23.8	86.2
MGA_1747	LOCUS_17360	sequence019:54574..54882(-)	internal_stop_codon	54889..54891(-)		WP_014640209.1	mannitol dehydrogenase family protein	100.0	20.8	93.1
MGA_1748	LOCUS_17370	sequence019:54889..56046(-)	internal_stop_codon	54889..54891(-)		WP_014640209.1	mannitol dehydrogenase family protein	100.0	78.6	96.4
MGA_1762	LOCUS_17510	sequence019:69345..70094(-)	partial			WP_000262163.1	L-glyceraldehyde 3-phosphate reductase	99.6	71.7	98.0
MGA_1763	LOCUS_17520	sequence020:1..754(+)	partial			WP_000810557.1	PTS transporter subunit EIIC	100.0	47.5	98.0
MGA_1782	LOCUS_17710	sequence020:19118..19657(-)	partial			WP_005051589.1	flap endonuclease Xni	100.0	71.3	98.9
MGA_1857	LOCUS_18450	sequence021:32885..33061(+)	internal_stop_codon	33059..33061(+)		WP_000199300.1	PLP-dependent aminotransferase family protein	100.0	12.3	94.8
MGA_1870	LOCUS_18580	sequence021:44201..44542(+)	partial			WP_000225786.1	phosphoenolpyruvate--protein phosphotransferase	100.0	14.2	95.6
MGA_1871	LOCUS_18590	sequence021:44590..44832(-)	partial			WP_001304530.1	anti-adapter protein IraD	100.0	63.0	95.0
MGA_1886	LOCUS_18740	sequence021:62942..63427(-)	partial			WP_107272294.1	HNH endonuclease	62.1	43.7	52.0
MGA_1888	LOCUS_18760	sequence021:64664..>65632(-)	partial			WP_002209167.1	McrC family protein	98.8	72.6	70.8
MGA_1951	LOCUS_19380	sequence022:54421..54609(+)	partial			WP_000148762.1	YdiH family protein	100.0	69.7	100.0
MGA_1962	LOCUS_19490	sequence022:65067..65300(+)	partial			WP_001070247.1	ferredoxin-like protein	98.7	36.5	100.0
MGA_2016	LOCUS_20030	sequence023:62813..62998(+)	internal_stop_codon	62996..62998(+)		WP_001350444.1	amino acid ABC transporter permease	100.0	16.6	90.2
MGA_2017	LOCUS_20040	sequence023:63074..63916(+)	internal_stop_codon	62996..62998(+)		WP_001298587.1	amino acid ABC transporter permease	100.0	76.3	99.6
MGA_2023	LOCUS_20100	sequence024:4459..6618(+)	frameshift		4402	WP_129197795.1	fimbria/pilus outer membrane usher protein	96.7	83.3	43.6
MGA_2024	LOCUS_20110	sequence024:6640..7650(+)	partial			WP_001351339.1	type 1 fimbrial major subunit FimA	30.7	55.6	29.8
MGA_2130	LOCUS_21170	sequence025:55661..56320(-)	partial			WP_000998048.1	IS66-like element ISEc8 family transposase	94.1	40.2	99.0
MGA_2136	LOCUS_21230	sequence026:32..775(-)	frameshift		878	WP_011070843.1	glutathione synthetase ATP-binding domain-like superfamily protein	98.8	79.5	44.7
MGA_2138	LOCUS_21250	sequence026:1690..1935(-)	internal_stop_codon	1690..1692(-)		WP_001218882.1	integrase arm-type DNA-binding domain-containing protein	92.6	17.8	80.0
MGA_2196	LOCUS_21830	sequence026:55967..56704(-)	partial			WP_010965472.1	glycosyltransferase	94.3	70.3	34.0
MGA_2201	LOCUS_21870	sequence027:1..705(+)	partial			WP_001136545.1	SDR family oxidoreductase	100.0	49.2	96.6
MGA_2302	LOCUS_22880	sequence028:52719..53030(+)	partial			WP_000262163.1	L-glyceraldehyde 3-phosphate reductase	100.0	29.8	100.0
MGA_2322	LOCUS_23080	sequence029:20141..21022(+)	frameshift		19998	WP_001701073.1	peptide chain release factor 2	100.0	80.3	99.3
MGA_2336	LOCUS_23220	sequence029:41439..41918(+)	partial			WP_000835685.1	selenium cofactor biosynthesis protein YqeC	100.0	62.1	98.1
MGA_2349	LOCUS_23330	sequence030:5527..6213(+)	internal_stop_codon	6211..6213(+)		WP_001207907.1	nitrate/nitrite transporter NarU	100.0	49.4	97.8
MGA_2350	LOCUS_23340	sequence030:6220..6915(+)	internal_stop_codon	6211..6213(+)		WP_001207931.1	nitrate/nitrite transporter NarU	100.0	50.0	95.7
MGA_2360	LOCUS_23440	sequence030:17078..17278(+)	partial			WP_000807562.1	SymE family type I addiction module toxin	98.5	53.7	52.3
MGA_2362	LOCUS_23460	sequence030:17908..18462(-)	frameshift		18521	WP_025330854.1	RHS repeat-associated core domain-containing protein	78.8	10.0	63.4
MGA_2363	LOCUS_23470	sequence030:18426..18953(-)	frameshift		18521,18302	WP_011069279.1	DUF6531 domain-containing protein	81.1	16.7	64.1
MGA_2364	LOCUS_23480	sequence030:18892..19947(-)	partial			WP_000011527.1	type VI secretion system Vgr family protein	86.6	41.7	81.9
MGA_2366	LOCUS_23500	sequence030:20521..21051(-)	partial			WP_003147109.1	type VI secretion system tip protein VgrG	74.4	12.9	34.5
MGA_2370	LOCUS_23540	sequence030:26893..27129(-)	partial			WP_001302140.1	colanic acid/biofilm transcriptional regulator McbR	71.8	25.3	87.5
MGA_2375	LOCUS_23590	sequence030:29180..29716(-)	internal_stop_codon	29726..29728(-)		WP_001163909.1	aminobutyraldehyde dehydrogenase	100.0	37.6	99.4
MGA_2376	LOCUS_23600	sequence030:29726..30604(-)	internal_stop_codon	29726..29728(-)		WP_001163909.1	aminobutyraldehyde dehydrogenase	100.0	61.6	95.5
MGA_2382	LOCUS_23660	sequence030:36589..36759(+)	partial			WP_000494244.1	YncJ family protein	100.0	73.7	98.2
MGA_2395	LOCUS_23790	sequence030:49736..50095(-)	partial			WP_001098532.1	methyl-accepting chemotaxis protein Trg	100.0	21.8	95.8
MGA_2397	LOCUS_23810	sequence030:50937..51533(+)	frameshift		50898,51525	WP_087522250.1	IS3-like element IS150 family transposase	99.0	43.0	99.0
MGA_2398	LOCUS_23820	sequence030:51556..51777(+)	frameshift		51524	WP_000866383.1	IS3 family transposase	100.0	25.8	100.0
MGA_2427	LOCUS_24110	sequence031:33575..34450(-)	frameshift		34452	WP_000036120.1	PTS trehalose transporter subunit IIBC	100.0	61.7	96.9
MGA_2428	LOCUS_24120	sequence031:34411..34995(-)	frameshift		34449	WP_011378955.1	PTS trehalose transporter subunit IIBC	93.8	38.5	100.0
MGA_2438	LOCUS_24220	sequence031:44252..44746(+)	frameshift		44611	WP_000036434.1	protein YjgL	79.3	21.5	80.8
MGA_2439	LOCUS_24230	sequence031:44857..45543(+)	frameshift,internal_stop_codon	45542..45544(+)	45619,44611	WP_000036506.1	protein YjgL	99.1	38.3	96.0
MGA_2440	LOCUS_24240	sequence031:45672..45854(+)	frameshift,internal_stop_codon	45541..45543(+)	45618,45852	WP_000036434.1	protein YjgL	100.0	9.9	83.3
MGA_2445	LOCUS_24290	sequence032:1..1113(+)	partial			WP_000048458.1	exonuclease	99.7	44.8	96.7
MGA_2466	LOCUS_24500	sequence032:22248..22814(-)	partial			WP_001116587.1	thiamine kinase	100.0	68.6	95.7
MGA_2502	LOCUS_24860	sequence032:48724..>49288(-)	partial			WP_000533821.1	DUF3102 domain-containing protein	96.8	59.5	74.6
MGA_2528	LOCUS_25120	sequence033:29249..29392(+)	internal_stop_codon	29390..29392(+)		WP_001078379.1	DUF2509 family protein	100.0	34.8	78.7
MGA_2529	LOCUS_25130	sequence033:29426..29656(+)	internal_stop_codon	29390..29392(+)		WP_001078374.1	DUF2509 family protein	100.0	56.3	98.7
MGA_2540	LOCUS_25220	sequence034:978..1244(+)	partial			WP_047373140.1	GNAT family N-acetyltransferase	94.3	50.9	83.1
MGA_2609	LOCUS_25900	sequence035:13775..16522(+)	partial			WP_001145638.1	hypothetical protein	62.0	68.3	42.3
MGA_2610	LOCUS_25910	sequence035:16522..19911(+)	partial			WP_162182797.1	hypothetical protein	42.5	40.1	21.7
MGA_2614	LOCUS_25950	sequence035:22868..23137(-)	partial			WP_002430757.1	biofilm peroxide resistance protein BsmA	100.0	62.7	86.5
MGA_2630	LOCUS_26110	sequence035:33878..34138(+)	frameshift		34126	WP_001173917.1	HipA domain-containing protein	97.7	19.9	97.6
MGA_2631	LOCUS_26120	sequence035:34138..35145(+)	frameshift		34129	WP_001173917.1	HipA domain-containing protein	100.0	79.4	99.7
MGA_2688	LOCUS_26680	sequence037:12023..12454(-)	frameshift		12684	WP_000920294.1	cell envelope integrity protein CreD	100.0	31.8	97.2
MGA_2689	LOCUS_26690	sequence037:12679..13374(-)	frameshift		12684	WP_000920294.1	cell envelope integrity protein CreD	100.0	51.3	98.3
MGA_2757	LOCUS_27350	sequence038:36946..37266(-)	partial			WP_001309532.1	4Fe-4S dicluster domain-containing protein	100.0	47.7	97.2
MGA_2760	LOCUS_27380	sequence038:40452..40871(-)	partial			WP_001070247.1	ferredoxin-like protein	96.4	64.4	95.5
MGA_2778	LOCUS_27550	sequence039:19911..20210(-)	partial			WP_001444237.1	F-type conjugal transfer protein TrbF	97.0	68.1	67.7
MGA_2807	LOCUS_27840	sequence039:40185..40325(-)	frameshift		40408	WP_000107535.1	hypothetical protein	100.0	48.4	100.0
MGA_2853	LOCUS_28300	sequence041:198..446(+)	partial			WP_000567766.1	transposase	91.5	62.0	94.7
MGA_2883	LOCUS_28600	sequence041:28730..28924(-)	partial			WP_001145139.1	N-glycosidase YbiA	100.0	40.0	90.6
MGA_2893	LOCUS_28700	sequence041:39217..>40251(-)	partial			WP_001267238.1	mechanosensitive channel protein	94.5	43.9	97.5
MGA_2909	LOCUS_28860	sequence042:21487..21855(-)	frameshift		21513	WP_015706074.1	substrate-binding domain-containing protein	94.3	34.1	67.0
MGA_2910	LOCUS_28870	sequence042:21956..22252(+)	partial			WP_015365771.1	SDR family oxidoreductase	100.0	39.4	87.8
MGA_2911	LOCUS_28880	sequence042:22263..23015(+)	internal_stop_codon	23035..23037(+)		WP_015706076.1	FGGY-family carbohydrate kinase	92.8	43.4	70.3
MGA_2912	LOCUS_28890	sequence042:23203..23406(+)	frameshift,internal_stop_codon	23035..23037(+)	23475,23382	WP_015706076.1	FGGY-family carbohydrate kinase	86.6	10.8	82.8
MGA_2913	LOCUS_28900	sequence042:23434..23700(+)	frameshift		23475,23382	WP_015706076.1	FGGY-family carbohydrate kinase	84.1	13.8	54.1
MGA_2937	LOCUS_29140	sequence043:6937..7206(+)	frameshift		6874,7235	WP_000968127.1	iron/manganese ABC transporter permease subunit SitD	64.0	20.0	71.9
MGA_2939	LOCUS_29160	sequence043:10138..10707(-)	internal_stop_codon	10747..10749(-)		WP_000123756.1	ATP-dependent RNA helicase DbpA	100.0	41.4	98.9
MGA_2940	LOCUS_29170	sequence043:10747..11511(-)	internal_stop_codon	10747..10749(-)		WP_000123737.1	ATP-dependent RNA helicase DbpA	100.0	55.6	98.4
MGA_2953	LOCUS_29300	sequence043:25368..25931(-)	partial			WP_000817700.1	DNA-binding transcriptional regulator PgrR	100.0	62.5	98.4
MGA_2956	LOCUS_29330	sequence043:27396..27674(+)	frameshift		27602	WP_000800177.1	SDR family oxidoreductase	76.1	33.0	100.0
MGA_2957	LOCUS_29340	sequence043:27598..28032(+)	frameshift		27602	WP_000800177.1	SDR family oxidoreductase	100.0	67.9	97.9
MGA_2966	LOCUS_29430	sequence043:36960..37616(-)	frameshift		37645	WP_000057985.1	ABC transporter ATP-binding protein	100.0	60.6	97.7
MGA_2967	LOCUS_29440	sequence043:37571..38041(-)	frameshift		37645	WP_005049752.1	ABC transporter ATP-binding protein	88.5	42.9	96.4
MGA_2969	LOCUS_29460	sequence044:101..328(-)	partial			WP_001218868.1	integrase arm-type DNA-binding domain-containing protein	80.0	14.3	95.0
MGA_3025	LOCUS_30010	sequence045:31647..31862(+)	partial			WP_000009890.1	helix-turn-helix transcriptional regulator	83.1	57.8	59.3
MGA_3037	LOCUS_30130	sequence046:6348..6851(+)	partial			WP_000753501.1	StfH/YfcO family fimbrial adhesin	96.4	55.8	65.4
MGA_3168	LOCUS_31430	sequence049:28616..29230(+)	internal_stop_codon	29228..29230(+)		WP_001080787.1	sugar ABC transporter permease	100.0	69.6	96.1
MGA_3169	LOCUS_31440	sequence049:29264..29497(+)	internal_stop_codon	29228..29230(+)		WP_001080790.1	sugar ABC transporter permease	100.0	26.3	93.5
MGA_3196	LOCUS_31700	sequence050:20201..20440(+)	frameshift		20377	WP_001138430.1	PLP-dependent aminotransferase family protein	74.7	13.3	98.3
MGA_3212	LOCUS_31860	sequence050:33385..33765(-)	partial			WP_000491430.1	alpha-amylase family glycosyl hydrolase	84.1	13.9	52.8
MGA_3220	LOCUS_31940	sequence051:6821..7372(-)	internal_stop_codon	7436..7438(-)		WP_000569571.1	M20 aminoacylase family protein	100.0	47.2	97.8
MGA_3221	LOCUS_31950	sequence051:7436..7987(-)	internal_stop_codon	7436..7438(-)		WP_000569571.1	M20 aminoacylase family protein	100.0	47.2	100.0
MGA_3235	LOCUS_32090	sequence051:25578..26972(-)	internal_stop_codon	26976..26978(-)		WP_000184828.1	formate C-acetyltransferase	100.0	60.7	99.8
MGA_3236	LOCUS_32100	sequence051:26976..27875(-)	internal_stop_codon	26976..26978(-)		WP_000184858.1	formate C-acetyltransferase	100.0	39.1	100.0
MGA_3247	LOCUS_32210	sequence052:7279..8277(+)	partial			WP_001018714.1	multidrug efflux MFS transporter permease subunit EmrY	100.0	64.8	94.3
MGA_3249	LOCUS_32230	sequence052:9731..9949(-)	partial			WP_000556028.1	D-serine transporter DsdX	100.0	16.2	88.9
MGA_3255	LOCUS_32290	sequence052:16588..16854(+)	partial			WP_000409798.1	hypothetical protein	55.7	84.5	73.5
MGA_3322	LOCUS_32950	sequence055:163..1230(+)	partial			WP_000804933.1	L-tartrate/succinate antiporter	100.0	72.9	90.1
MGA_3331	LOCUS_33040	sequence055:9764..10909(-)	frameshift		10932	WP_000094725.1	aerotaxis sensor receptor Aer	100.0	75.3	96.1
MGA_3332	LOCUS_33050	sequence055:10885..11283(-)	frameshift		10932	WP_000094725.1	aerotaxis sensor receptor Aer	86.4	22.5	100.0
MGA_3356	LOCUS_33290	sequence056:8793..8966(+)	frameshift		9045,8951	WP_000020617.1	hypothetical protein	93.0	13.0	86.8
MGA_3379	LOCUS_33520	sequence057:5841..6041(+)	partial			WP_000383836.1	YpfN family protein	74.2	74.2	87.8
MGA_3382	LOCUS_33550	sequence057:8924..9094(-)	frameshift		9093	WP_001267506.1	neutral zinc metallopeptidase	100.0	19.5	98.2
MGA_3383	LOCUS_33560	sequence057:9091..9786(-)	frameshift		9093	WP_001267498.1	neutral zinc metallopeptidase	100.0	80.5	94.4
MGA_3406	LOCUS_33790	sequence058:2047..2268(+)	internal_stop_codon	2266..2268(+)		WP_001336325.1	glutathione-specific gamma-glutamylcyclotransferase	100.0	31.6	100.0
MGA_3407	LOCUS_33800	sequence058:2329..2742(+)	internal_stop_codon	2266..2268(+)		WP_001306584.1	glutathione-specific gamma-glutamylcyclotransferase	100.0	57.6	98.5
MGA_3444	LOCUS_34170	sequence059:11783..12262(+)	frameshift		11702	WP_191774878.1	hypothetical protein	63.5	24.8	89.1
MGA_3538	LOCUS_35090	sequence062:27910..28182(-)	partial			WP_000336721.1	IS3 family transposase	96.7	32.0	92.0
MGA_3539	LOCUS_35100	sequence062:28555..28794(+)	internal_stop_codon	28792..28794(+),28867..28869(+)		WP_001260384.1	hypothetical protein	100.0	38.2	84.8
MGA_3575	LOCUS_35440	sequence064:8525..8683(+)	internal_stop_codon	8681..8683(+)		WP_000038456.1	PTS fructose transporter subunit IIB	100.0	48.1	96.2
MGA_3576	LOCUS_35450	sequence064:8717..8851(+)	internal_stop_codon	8681..8683(+)		WP_005047083.1	PTS fructose transporter subunit IIB	100.0	40.7	97.7
MGA_3599	LOCUS_35670	sequence065:4504..6471(-)	frameshift		6488	WP_000099451.1	aconitate hydratase AcnA	100.0	73.5	98.9
MGA_3600	LOCUS_35680	sequence065:6465..7178(-)	frameshift		6488	WP_000099535.1	aconitate hydratase AcnA	97.0	25.8	98.7
MGA_3712	LOCUS_36780	sequence068:25327..25689(-)	partial			WP_001286216.1	gamma carbonic anhydrase family protein	100.0	65.2	99.2
MGA_3731	LOCUS_36970	sequence069:16765..17199(-)	frameshift		16712,16773	WP_000081143.1	type III secretion system effector EspL1	98.6	22.5	88.0
MGA_3741	LOCUS_37060	sequence070:597..1097(-)	partial			WP_001390463.1	autotransporter outer membrane beta-barrel domain-containing protein	77.1	16.6	94.5
MGA_3742	LOCUS_37070	sequence070:1233..1631(-)	frameshift		1297,1675	WP_001309450.1	hypothetical protein	84.8	34.3	92.0
MGA_3743	LOCUS_37080	sequence070:1655..1918(-)	frameshift,internal_stop_codon	1934..1936(-)	1678	WP_001309450.1	hypothetical protein	93.1	26.3	88.4
MGA_3745	LOCUS_37100	sequence070:2855..3541(-)	frameshift		2875	WP_012602364.1	cyclic diguanylate phosphodiesterase	97.8	44.0	93.7
MGA_3746	LOCUS_37110	sequence070:4052..4228(-)	partial			WP_001065750.1	protein YmgC	100.0	70.7	100.0
MGA_3766	LOCUS_37310	sequence070:21646..21843(-)	partial			WP_001132157.1	T3SS effector guanine nucleotide exchange factor EspM2	98.5	32.7	82.8
MGA_3769	LOCUS_37340	sequence070:24336..24518(-)	frameshift		24353	WP_001443810.1	DUF1076 domain-containing protein	91.7	26.3	90.9
MGA_3809	LOCUS_37740	sequence072:11027..11806(-)	partial			WP_000534813.1	hypothetical protein	51.7	84.1	50.4
MGA_3821	LOCUS_37860	sequence072:21413..21562(+)	frameshift,internal_stop_codon	21560..21562(+)	21646	WP_000194575.1	hypothetical protein	100.0	25.0	93.9
MGA_3822	LOCUS_37870	sequence072:21576..21851(+)	frameshift,internal_stop_codon	21560..21562(+)	21646	WP_000194575.1	hypothetical protein	72.5	36.2	53.5
MGA_3847	LOCUS_38120	sequence074:1195..1995(-)	internal_stop_codon	2029..2031(-)		WP_014640107.1	cyclic-guanylate-specific phosphodiesterase PdeB	100.0	51.6	99.6
MGA_3848	LOCUS_38130	sequence074:2029..2751(-)	internal_stop_codon	2029..2031(-)		WP_014640107.1	cyclic-guanylate-specific phosphodiesterase PdeB	99.2	46.1	95.0
MGA_3880	LOCUS_38450	sequence075:12349..14007(-)	partial			WP_011205650.1	PilN family type IVB pilus formation outer membrane protein	67.4	66.7	25.2
MGA_3887	LOCUS_38520	sequence075:20444..20665(+)	internal_stop_codon	20663..20665(+)		WP_000085319.1	IS3 family transposase	100.0	26.2	94.5
MGA_3889	LOCUS_38540	sequence075:21149..21367(-)	partial			WP_000194542.1	hypothetical protein	73.6	31.4	90.6
MGA_3904	LOCUS_38690	sequence076:12135..12569(+)	partial			WP_097398211.1	cell division protein ZipA	100.0	43.9	100.0
MGA_3911	LOCUS_38760	sequence076:18831..19199(+)	internal_stop_codon	19197..19199(+)		WP_000020390.1	xanthosine/proton symporter XapB	100.0	29.2	96.7
MGA_3912	LOCUS_38770	sequence076:19215..20087(+)	internal_stop_codon	19197..19199(+)		WP_000020390.1	xanthosine/proton symporter XapB	100.0	69.4	97.2
MGA_3916	LOCUS_38810	sequence077:1712..2386(-)	partial			WP_000097390.1	D-lactate dehydrogenase	100.0	39.2	98.2
MGA_3950	LOCUS_39150	sequence079:4030..4248(-)	partial			WP_014640136.1	hypothetical protein	100.0	73.5	94.4
MGA_3959	LOCUS_39240	sequence079:14093..14293(-)	internal_stop_codon	14093..14095(-)		WP_000967595.1	YciI family protein	100.0	67.3	100.0
MGA_3960	LOCUS_39250	sequence079:14517..15233(+)	partial			WP_000171273.1	TonB system transport protein TonB	58.0	58.2	89.9
MGA_4038	LOCUS_40020	sequence084:2811..3383(+)	partial			WP_001301527.1	protein bax	100.0	69.3	100.0
MGA_4053	LOCUS_40170	sequence085:3713..3877(-)	frameshift		3896	WP_000719011.1	fimbria/pilus periplasmic chaperone	100.0	22.6	98.1
MGA_4054	LOCUS_40180	sequence085:3891..4388(-)	frameshift		3899	WP_000677332.1	fimbria/pilus periplasmic chaperone	99.4	73.2	99.4
MGA_4061	LOCUS_40250	sequence085:16747..16932(+)	frameshift		16926	WP_000636923.1	protein YehK	98.4	57.1	98.3
MGA_4062	LOCUS_40260	sequence086:1..577(+)	partial			WP_001301901.1	flagellar biosynthesis protein FlhA	100.0	33.0	91.6
MGA_4085	LOCUS_40490	sequence087:5838..6896(+)	frameshift,internal_stop_codon	7128..7130(+)	6839	WP_000547185.1	IS4-like element IS4 family transposase	96.0	76.5	94.7
MGA_4086	LOCUS_40500	sequence087:6851..7129(+)	frameshift,internal_stop_codon	7128..7130(+)	6839	WP_000547185.1	IS4-like element IS4 family transposase	100.0	20.8	93.5
MGA_4096	LOCUS_40600	sequence087:15499..15732(-)	partial			WP_013098812.1	tyrosine-type recombinase/integrase	87.0	18.6	74.6
MGA_4097	LOCUS_40610	sequence087:15985..16335(+)	partial			WP_001115524.1	phage tail protein	100.0	65.2	96.6
MGA_4099	LOCUS_40630	sequence088:197..403(+)	partial			WP_010891287.1	IS3 family transposase	100.0	24.9	100.0
MGA_4109	LOCUS_40730	sequence088:12014..12196(-)	partial			WP_000039887.1	phenylacetic acid degradation operon negative regulatory protein PaaX	83.3	15.8	88.0
MGA_4110	LOCUS_40740	sequence088:12185..12373(+)	partial			WP_001067514.1	transcriptional regulator FeaR	100.0	20.6	96.8
MGA_4145	LOCUS_41080	sequence091:1449..1730(+)	partial			WP_000301956.1	TonB family protein	100.0	73.8	72.0
MGA_4166	LOCUS_41280	sequence092:4727..5083(-)	frameshift,internal_stop_codon	5086..5088(-),5087..5089(-)	5241,4746	WP_010723107.1	inverse autotransporter adhesin YeeJ	96.6	4.8	84.2
MGA_4167	LOCUS_41290	sequence092:5233..5517(-)	frameshift,internal_stop_codon	5086..5088(-)	5241	WP_014714124.1	inverse autotransporter adhesin-like protein YeeJ	88.3	3.1	91.6
MGA_4177	LOCUS_41390	sequence092:14441..14767(-)	partial			WP_000824389.1	porin	100.0	30.7	99.1
MGA_4179	LOCUS_41410	sequence093:137..3004(+)	partial			WP_015704642.1	autotransporter outer membrane beta-barrel domain-containing protein	97.9	40.7	29.2
MGA_4244	LOCUS_42040	sequence098:5347..5607(+)	partial			WP_001306826.1	hemolysin HlyE	100.0	28.4	96.5
MGA_4253	LOCUS_42130	sequence098:11197..11508(-)	partial			WP_012779382.1	adhesin-like autotransporter YpjA/EhaD	84.5	5.7	98.9
MGA_4268	LOCUS_42270	sequence100:7682..7855(-)	partial			WP_000951026.1	type III secretion system effector kinase NleH1-1	94.7	18.4	100.0
MGA_4276	LOCUS_42340	sequence101:1116..1925(+)	partial			WP_000891328.1	DUF551 domain-containing protein	29.7	36.5	85.0
MGA_4277	LOCUS_42350	sequence101:1925..2497(+)	partial			WP_001515375.1	exonuclease	96.8	21.7	60.3
MGA_4292	LOCUS_42500	sequence102:3405..3833(-)	partial			WP_000185340.1	biotin sulfoxide reductase	100.0	18.3	97.2
MGA_4293	LOCUS_42510	sequence102:3742..5502(-)	partial			WP_005052317.1	biotin sulfoxide reductase	91.6	70.8	98.0
MGA_4325	LOCUS_42800	sequence106:1..1594(+)	partial			WP_014640147.1	oxygen-sensing cyclic-di-GMP phosphodiesterase	100.0	66.3	99.8
MGA_4337	LOCUS_42910	sequence107:2057..2317(-)	frameshift		2319	WP_001188549.1	IS91 family transposase	100.0	19.2	90.7
MGA_4338	LOCUS_42920	sequence107:2311..2505(-)	frameshift		2319	WP_001188549.1	IS91 family transposase	87.5	12.5	94.6
MGA_4340	LOCUS_42940	sequence107:2996..3742(+)	frameshift		2825	WP_152858326.1	IS3 family transposase	100.0	63.3	99.2
MGA_4341	LOCUS_42950	sequence107:3746..4027(-)	partial			WP_000937577.1	IS91 family transposase	98.9	24.1	93.7
MGA_4347	LOCUS_43000	sequence108:96..365(-)	partial			WP_011971054.1	IS110 family transposase	82.0	21.5	49.3
MGA_4353	LOCUS_43060	sequence108:3917..4153(-)	internal_stop_codon	4247..4249(-)		WP_000071962.1	IS256 family transposase	65.4	17.6	92.2
MGA_4354	LOCUS_43070	sequence108:4247..4699(-)	internal_stop_codon	4247..4249(-)		WP_025246912.1	IS256-like element ISSoEn2 family transposase	100.0	37.3	88.0
MGA_4374	LOCUS_43230	sequence112:1386..1640(+)	partial			WP_001280954.1	type IV toxin-antitoxin system YeeU family antitoxin	100.0	67.7	91.7
MGA_4392	LOCUS_43390	sequence115:3566..3778(+)	partial			WP_000426265.1	diguanylate cyclase DosC	77.1	11.7	98.1
MGA_4445	LOCUS_43780	sequence130:393..809(-)	partial			WP_000544830.1	IS21-like element IS21 family helper ATPase IstB	58.7	30.6	93.8
MGA_4446	LOCUS_43790	sequence130:819..1286(-)	frameshift		830	WP_000952372.1	IS21-like element IS21 family transposase	98.1	39.0	96.7
