{
    "type": "genome",
    "identifier": "GCA_022735935.1",
    "organism": "Thermincola sp.",
    "title": "Thermincola sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University Duisburg-Essen",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022735935.1",
        "bioproject": "PRJNA767587",
        "biosample": "SAMN22209347",
        "wgs_master": "DYZV00000000.1",
        "refseq_category": "na",
        "taxid": "2883545",
        "species_taxid": "2883545",
        "organism_name": "Thermincola sp.",
        "infraspecific_name": "",
        "isolate": "AfrMine_TT107_48_379",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/28",
        "asm_name": "ASM2273593v1",
        "submitter": "University Duisburg-Essen",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/735/935/GCA_022735935.1_ASM2273593v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-28",
    "dateModified": "2022-03-28",
    "datePublished": "2022-03-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Thermincola sp."
        ],
        "sample_taxid": [
            "2883545"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "South Africa: Tau Tona mine in Carletonville district"
        ],
        "sample_host_location_id": [],
        "data_size": "0.459 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 75.0,
        "contamination": 0.52,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1600388",
        "Number of Sequences": "140",
        "Longest Sequences (bp)": "40097",
        "N50 (bp)": "12805",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "48.1",
        "Number of CDSs": "1505",
        "Average Protein Length": "295.0",
        "Coding Ratio (%)": "83.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "17",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 75.0,
            "contamination": 0.52,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002339745.1",
                "gtdb_species": "s__UBA2595 sp002339745",
                "ani": 99.3556,
                "matched_fragments": 320,
                "total_fragments": 457,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Thermincolia;o__Thermincolales;f__UBA2595;g__UBA2595",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002840275.1",
                "gtdb_species": "s__W-Firmicutes-14 sp002840275",
                "ani": 76.798,
                "matched_fragments": 67,
                "total_fragments": 457,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Thermincolia;o__Thermincolales;f__UBA2595;g__W-Firmicutes-14",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002840165.1",
                "gtdb_species": "s__GW-Firmicutes-8 sp002840165",
                "ani": 75.8521,
                "matched_fragments": 61,
                "total_fragments": 457,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Thermincolia;o__Thermincolales;f__UBA2595;g__GW-Firmicutes-8",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.35,
        "cell_length": 0.127,
        "doubling_h": null,
        "growth_tmp": 57.5,
        "optimum_tmp": 57.5,
        "optimum_ph": 8.0,
        "genome_size": 3181036.0,
        "gc_content": 45.691,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 0.0,
        "thermophilic_range_tmp": 1.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_B",
        "c__Thermincolia",
        "o__Thermincolales",
        "f__UBA2595",
        "g__UBA2595",
        "s__UBA2595 sp002339745"
    ],
    "_genome_taxon": [
        "Thermincola",
        "sp.",
        "d__Bacteria",
        "p__Bacillota_B",
        "c__Thermincolia",
        "o__Thermincolales",
        "f__UBA2595",
        "g__UBA2595",
        "s__UBA2595 sp002339745",
        "Bacteria",
        "Bacillota",
        "B",
        "Thermincolia",
        "Thermincolales",
        "UBA2595",
        "UBA2595",
        "UBA2595",
        "sp002339745"
    ],
    "_meo": [
        {
            "id": "MEO_0000366",
            "label": "ground water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}