{ "type": "genome", "identifier": "GCA_022735985.1", "organism": "Anaerolinea sp.", "title": "Anaerolinea sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "University Duisburg-Essen", "publication": [ {} ], "properties": { "assembly_accession": "GCA_022735985.1", "bioproject": "PRJNA767587", "biosample": "SAMN22209343", "wgs_master": "DYZZ00000000.1", "refseq_category": "na", "taxid": "1872519", "species_taxid": "1872519", "organism_name": "Anaerolinea sp.", "infraspecific_name": "", "isolate": "AfrMine_TT107_55_11_2", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/03/28", "asm_name": "ASM2273598v1", "submitter": "University Duisburg-Essen", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/735/985/GCA_022735985.1_ASM2273598v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-03-28", "dateModified": "2022-03-28", "datePublished": "2022-03-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Anaerolinea sp." ], "sample_taxid": [ "1872519" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Africa: Tau Tona mine in Carletonville district" ], "sample_host_location_id": [], "data_size": "0.714 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 83.33, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2506792", "Number of Sequences": "234", "Longest Sequences (bp)": "44826", "N50 (bp)": "12943", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "54.7", "Number of CDSs": "2113", "Average Protein Length": "320.6", "Coding Ratio (%)": "81.1", "Number of rRNAs": "0", "Number of tRNAs": "25", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Bellilinea caldifistulae", "strain": "strain=GOMI-1", "accession": "GCA_001306055.1", "taxid": 360411, "species_taxid": 360411, "relation_to_type": "type", "validated": true, "ani": 81.9435, "matched_fragments": 514, "total_fragments": 726, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bellilinea caldifistulae", "strain": "strain=GOMI-1", "accession": "GCA_001050215.2", "taxid": 360411, "species_taxid": 360411, "relation_to_type": "type", "validated": true, "ani": 81.8749, "matched_fragments": 527, "total_fragments": 726, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaerolinea thermophila", "strain": "strain=UNI-1", "accession": "GCA_000199675.1", 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"Chloroflexota", "Anaerolineae", "Anaerolineales", "Anaerolineaceae", "Bellilinea", "Bellilinea", "sp003448875" ], "_meo": [ { "id": "MEO_0000366", "label": "ground water" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }