{
    "type": "genome",
    "identifier": "GCA_022738055.1",
    "organism": "Barnesiella sp.",
    "title": "Barnesiella sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Georgia Institute of Technology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022738055.1",
        "bioproject": "PRJNA747761",
        "biosample": "SAMN20301435",
        "wgs_master": "JAIISC000000000.1",
        "refseq_category": "na",
        "taxid": "2033407",
        "species_taxid": "2033407",
        "organism_name": "Barnesiella sp.",
        "infraspecific_name": "",
        "isolate": "Map_172_020",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/28",
        "asm_name": "ASM2273805v1",
        "submitter": "Georgia Institute of Technology",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/738/055/GCA_022738055.1_ASM2273805v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-28",
    "dateModified": "2022-03-28",
    "datePublished": "2022-03-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Barnesiella sp."
        ],
        "sample_taxid": [
            "2033407"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Mozambique"
        ],
        "sample_host_location_id": [],
        "data_size": "0.900 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.52,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3142510",
        "Number of Sequences": "201",
        "Longest Sequences (bp)": "121311",
        "N50 (bp)": "32854",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "43.5",
        "Number of CDSs": "2313",
        "Average Protein Length": "379.8",
        "Coding Ratio (%)": "83.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "50",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Barnesiella intestinihominis",
                "strain": "strain=YIT 11860",
                "accession": "GCA_000296465.1",
                "taxid": 487174,
                "species_taxid": 487174,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.4977,
                "matched_fragments": 921,
                "total_fragments": 949,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Barnesiella viscericola",
                "strain": "strain=C46, DSM 18177",
                "accession": "GCA_000512915.1",
                "taxid": 397865,
                "species_taxid": 397865,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.6607,
                "matched_fragments": 276,
                "total_fragments": 949,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Coprobacter secundus subsp. similis",
                "strain": "strain=2CBH44",
                "accession": "GCA_015097275.1",
                "taxid": 2751153,
                "species_taxid": 1501392,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9374,
                "matched_fragments": 59,
                "total_fragments": 949,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Coprobacter fastidiosus",
                "strain": "strain=NSB1",
                "accession": "GCA_003634345.1",
                "taxid": 1099853,
                "species_taxid": 1099853,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8849,
                "matched_fragments": 73,
                "total_fragments": 949,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Coprobacter fastidiosus",
                "strain": "strain=NSB1",
                "accession": "GCA_000473955.1",
                "taxid": 1099853,
                "species_taxid": 1099853,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8523,
                "matched_fragments": 74,
                "total_fragments": 949,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.52,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000296465.1",
                "gtdb_species": "s__Barnesiella intestinihominis",
                "ani": 98.4977,
                "matched_fragments": 921,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Barnesiellaceae;g__Barnesiella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.49",
                "min_intra_species_ani": "98.18",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 27,
                "status": "conclusive"
            },
            {
                "accession": "GCA_019114445.1",
                "gtdb_species": "s__Barnesiella excrementigallinarum",
                "ani": 79.574,
                "matched_fragments": 395,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Barnesiellaceae;g__Barnesiella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_019115485.1",
                "gtdb_species": "s__Barnesiella excrementavium",
                "ani": 78.7285,
                "matched_fragments": 266,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Barnesiellaceae;g__Barnesiella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000512915.1",
                "gtdb_species": "s__Barnesiella viscericola",
                "ani": 78.6809,
                "matched_fragments": 275,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Barnesiellaceae;g__Barnesiella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.37",
                "min_intra_species_ani": "97.37",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_002159975.1",
                "gtdb_species": "s__Barnesiella merdigallinarum",
                "ani": 78.6594,
                "matched_fragments": 289,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Barnesiellaceae;g__Barnesiella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.77",
                "min_intra_species_ani": "95.24",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCF_002161555.1",
                "gtdb_species": "s__Barnesiella merdipullorum",
                "ani": 78.6529,
                "matched_fragments": 293,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Barnesiellaceae;g__Barnesiella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.43",
                "min_intra_species_ani": "99.43",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017462265.1",
                "gtdb_species": "s__UBA11471 sp017462265",
                "ani": 76.7637,
                "matched_fragments": 54,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA11471;g__UBA11471",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.16,
        "cell_length": 0.458,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": 34.75,
        "optimum_ph": 7.0,
        "genome_size": 3255281.5,
        "gc_content": 47.805,
        "coding_genes": 2473.667,
        "rRNA16S_genes": 5.0,
        "tRNA_genes": 62.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Barnesiellaceae",
        "g__Barnesiella",
        "s__Barnesiella intestinihominis"
    ],
    "_genome_taxon": [
        "Barnesiella",
        "sp.",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Barnesiellaceae",
        "g__Barnesiella",
        "s__Barnesiella intestinihominis",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Barnesiellaceae",
        "Barnesiella",
        "Barnesiella",
        "intestinihominis"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}