{
    "type": "genome",
    "identifier": "GCA_022741925.1",
    "organism": "Streptococcaceae bacterium",
    "title": "Streptococcaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Georgia Institute of Technology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022741925.1",
        "bioproject": "PRJNA747761",
        "biosample": "SAMN20301304",
        "wgs_master": "JAIINB000000000.1",
        "refseq_category": "na",
        "taxid": "2291322",
        "species_taxid": "2291322",
        "organism_name": "Streptococcaceae bacterium",
        "infraspecific_name": "",
        "isolate": "Map_142_012",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/28",
        "asm_name": "ASM2274192v1",
        "submitter": "Georgia Institute of Technology",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/741/925/GCA_022741925.1_ASM2274192v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-28",
    "dateModified": "2022-03-28",
    "datePublished": "2022-03-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Streptococcaceae bacterium"
        ],
        "sample_taxid": [
            "2291322"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Mozambique"
        ],
        "sample_host_location_id": [],
        "data_size": "0.884 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3068224",
        "Number of Sequences": "760",
        "Longest Sequences (bp)": "44845",
        "N50 (bp)": "7370",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "38.6",
        "Number of CDSs": "2765",
        "Average Protein Length": "255.4",
        "Coding Ratio (%)": "69.1",
        "Number of rRNAs": "1",
        "Number of tRNAs": "58",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Lactococcus petauri",
                "strain": "strain=159469",
                "accession": "GCA_002154895.1",
                "taxid": 1940789,
                "species_taxid": 1940789,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.6562,
                "matched_fragments": 461,
                "total_fragments": 632,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Lactococcus garvieae",
                "strain": "strain=NBRC 100934",
                "accession": "GCA_000739975.1",
                "taxid": 1363,
                "species_taxid": 1363,
                "relation_to_type": "type",
                "validated": true,
                "ani": 93.4293,
                "matched_fragments": 418,
                "total_fragments": 632,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lactococcus garvieae subsp. garvieae",
                "strain": "strain=CCUG 32208T",
                "accession": "GCA_008692985.1",
                "taxid": 1890280,
                "species_taxid": 1363,
                "relation_to_type": "type",
                "validated": true,
                "ani": 93.3076,
                "matched_fragments": 425,
                "total_fragments": 632,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lactococcus garvieae",
                "strain": "strain=DSM 20684",
                "accession": "GCA_002441675.1",
                "taxid": 1363,
                "species_taxid": 1363,
                "relation_to_type": "type",
                "validated": true,
                "ani": 93.3073,
                "matched_fragments": 426,
                "total_fragments": 632,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lactococcus garvieae",
                "strain": "strain=FDAARGOS_929",
                "accession": "GCA_016026695.1",
                "taxid": 1363,
                "species_taxid": 1363,
                "relation_to_type": "type",
                "validated": true,
                "ani": 93.2971,
                "matched_fragments": 428,
                "total_fragments": 632,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lactococcus formosensis subsp. bovis",
                "strain": "strain=LMG 30663",
                "accession": "GCA_018403725.1",
                "taxid": 1850438,
                "species_taxid": 1281486,
                "relation_to_type": "type",
                "validated": true,
                "ani": 92.6973,
                "matched_fragments": 440,
                "total_fragments": 632,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lactococcus formosensis",
                "strain": "strain=NBRC 109475",
                "accession": "GCA_018403745.1",
                "taxid": 1281486,
                "species_taxid": 1281486,
                "relation_to_type": "type",
                "validated": true,
                "ani": 92.6057,
                "matched_fragments": 432,
                "total_fragments": 632,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_002154895.1",
                "gtdb_species": "s__Lactococcus petauri",
                "ani": 97.6562,
                "matched_fragments": 461,
                "total_fragments": 632,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.05",
                "min_intra_species_ani": "96.82",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 32,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000739975.1",
                "gtdb_species": "s__Lactococcus garvieae",
                "ani": 93.4293,
                "matched_fragments": 418,
                "total_fragments": 632,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.37",
                "min_intra_species_ani": "97.58",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 26,
                "status": "-"
            },
            {
                "accession": "GCF_018403745.1",
                "gtdb_species": "s__Lactococcus formosensis",
                "ani": 92.6057,
                "matched_fragments": 432,
                "total_fragments": 632,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.20",
                "min_intra_species_ani": "97.52",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
                "accession": "GCF_016758115.1",
                "gtdb_species": "s__Lactococcus sp002492185",
                "ani": 83.4415,
                "matched_fragments": 334,
                "total_fragments": 632,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.71",
                "min_intra_species_ani": "98.67",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCF_016027715.1",
                "gtdb_species": "s__Lactococcus garvieae_A",
                "ani": 82.5543,
                "matched_fragments": 350,
                "total_fragments": 632,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.53",
                "min_intra_species_ani": "98.50",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_001591705.1",
                "gtdb_species": "s__Lactococcus cremoris",
                "ani": 78.0137,
                "matched_fragments": 115,
                "total_fragments": 632,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.76",
                "min_intra_species_ani": "97.45",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 70,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.157,
        "cell_length": -0.166,
        "doubling_h": -0.187,
        "growth_tmp": 36.129,
        "optimum_tmp": 35.805,
        "optimum_ph": 6.657,
        "genome_size": 2105147.665,
        "gc_content": 39.138,
        "coding_genes": 1966.735,
        "rRNA16S_genes": 4.786,
        "tRNA_genes": 61.771,
        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": 0.25,
        "facultative_respiration": 0.373,
        "anaerobic_respiration": 0.131,
        "aerobic_respiration": 0.494,
        "mesophilic_range_tmp": 0.972,
        "thermophilic_range_tmp": 0.027,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 0.935,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.064,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota",
        "c__Bacilli",
        "o__Lactobacillales",
        "f__Streptococcaceae",
        "g__Lactococcus",
        "s__Lactococcus petauri"
    ],
    "_genome_taxon": [
        "Streptococcaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota",
        "c__Bacilli",
        "o__Lactobacillales",
        "f__Streptococcaceae",
        "g__Lactococcus",
        "s__Lactococcus petauri",
        "Bacteria",
        "Bacillota",
        "Bacilli",
        "Lactobacillales",
        "Streptococcaceae",
        "Lactococcus",
        "Lactococcus",
        "petauri"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}