{ "type": "genome", "identifier": "GCA_022752295.1", "organism": "Lactobacillus jensenii", "title": "Lactobacillus jensenii", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Massachusetts General Hospital", "publication": [ {} ], "properties": { "assembly_accession": "GCA_022752295.1", "bioproject": "PRJNA799445", "biosample": "SAMN25166376", "wgs_master": "JALBNS000000000.1", "refseq_category": "na", "taxid": "109790", "species_taxid": "109790", "organism_name": "Lactobacillus jensenii", "infraspecific_name": "", "isolate": "MHKL_MAG_00074", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/03/29", "asm_name": "ASM2275229v1", "submitter": "Massachusetts General Hospital", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/752/295/GCA_022752295.1_ASM2275229v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-03-29", "dateModified": "2022-03-29", "datePublished": "2022-03-29", "_annotation": { "sample_count": 1, "sample_organism": [ "Lactobacillus jensenii" ], "sample_taxid": [ "109790" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA" ], "sample_host_location_id": [], "data_size": "0.405 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1441592", "Number of Sequences": "73", "Longest Sequences (bp)": "78932", "N50 (bp)": "36004", "Gap Ratio (%)": "0.032603", "GCcontent (%)": "34.2", "Number of CDSs": "1376", "Average Protein Length": "306.7", "Coding Ratio (%)": "87.8", "Number of rRNAs": "0", "Number of tRNAs": "25", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Lactobacillus jensenii", "strain": "strain=ATCC 25258", "accession": "GCA_018094625.1", "taxid": 109790, "species_taxid": 109790, "relation_to_type": "type", "validated": true, "ani": 99.9384, "matched_fragments": 437, "total_fragments": 445, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Lactobacillus jensenii", "strain": "strain=DSM 20557", "accession": "GCA_001436455.1", "taxid": 109790, "species_taxid": 109790, "relation_to_type": "type", "validated": true, "ani": 99.872, "matched_fragments": 427, "total_fragments": 445, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Lactobacillus mulieris", "strain": "strain=c10Ua161M", "accession": "GCA_007095465.1", "taxid": 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