# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_16	LOCUS_00150	sequence01:15551..15739(+)	partial			WP_011860793.1	relaxase/mobilization nuclease domain-containing protein	87.1	13.1	53.4
MGA_20	LOCUS_00190	sequence01:19667..19915(-)	internal_stop_codon	19667..19669(-)		WP_011861369.1	AAA family ATPase	100.0	14.8	50.0
MGA_22	LOCUS_00210	sequence01:20270..20575(-)	partial			WP_011861368.1	single-strand DNA-binding protein	95.0	44.3	53.6
MGA_59	LOCUS_00580	sequence01:66734..67396(-)	partial			WP_003549662.1	cytochrome C5	84.5	56.9	37.1
MGA_64	LOCUS_00630	sequence01:71981..72406(-)	partial			WP_003703249.1	type I 3-dehydroquinate dehydratase	80.9	45.6	27.6
MGA_116	LOCUS_01150	sequence01:127778..128281(+)	partial			WP_002385065.1	folate family ECF transporter S component	76.0	70.3	38.8
MGA_127	LOCUS_01260	sequence01:140030..140992(+)	frameshift		140968	WP_003546459.1	hydroxymethylglutaryl-CoA reductase	98.1	78.2	57.5
MGA_131	LOCUS_01300	sequence02:105..875(-)	partial			WP_012583055.1	zinc-dependent alcohol dehydrogenase family protein	78.1	63.0	29.2
MGA_136	LOCUS_01350	sequence02:4957..6105(-)	partial			WP_000701298.1	peptidase domain-containing ABC transporter	94.8	52.4	27.4
MGA_138	LOCUS_01370	sequence02:7066..7383(+)	frameshift		7377	WP_011861371.1	relaxase/mobilization nuclease domain-containing protein	95.2	22.6	91.0
MGA_139	LOCUS_01380	sequence02:7373..7954(+)	frameshift		7377	WP_011861371.1	relaxase/mobilization nuclease domain-containing protein	99.0	43.1	80.1
MGA_142	LOCUS_01410	sequence02:9001..9171(-)	internal_stop_codon	9001..9003(-)		WP_011861367.1	DEAD/DEAH box helicase family protein	100.0	1.9	94.6
MGA_151	LOCUS_01500	sequence02:17058..17480(+)	frameshift,internal_stop_codon	16991..16993(+),16910..16912(+)	16984,17029	WP_141741171.1	IS3 family transposase	69.3	20.1	62.9
MGA_174	LOCUS_01730	sequence02:40340..41236(-)	frameshift		41421	WP_002356719.1	nucleobase:cation symporter-2 family protein	97.0	65.0	45.3
MGA_175	LOCUS_01740	sequence02:41398..41679(-)	frameshift		41421	WP_002356719.1	nucleobase:cation symporter-2 family protein	87.1	18.3	54.3
MGA_208	LOCUS_02070	sequence02:76843..77223(+)	partial			WP_003548701.1	helix-turn-helix transcriptional regulator	93.7	43.9	39.8
MGA_210	LOCUS_02090	sequence02:78589..78888(+)	internal_stop_codon	78886..78888(+),79069..79071(+)		WP_003549316.1	phage integrase SAM-like domain-containing protein	100.0	24.1	90.9
MGA_211	LOCUS_02100	sequence02:79144..79350(+)	internal_stop_codon	78886..78888(+),79069..79071(+),79348..79350(+)		WP_003549316.1	phage integrase SAM-like domain-containing protein	100.0	16.5	92.6
MGA_249	LOCUS_02480	sequence03:12689..13624(-)	partial			WP_003550055.1	DNA/RNA non-specific endonuclease	67.2	73.3	53.3
MGA_284	LOCUS_02830	sequence03:46968..47411(-)	partial			WP_004080548.1	PAS domain-containing protein	83.0	63.6	28.2
MGA_295	LOCUS_02940	sequence03:59258..60274(-)	partial			WP_004791496.1	HesA/MoeB/ThiF family protein	34.3	39.1	35.3
MGA_299	LOCUS_02980	sequence03:62421..62852(+)	partial			WP_011222015.1	AAA family ATPase	100.0	54.1	56.2
MGA_306	LOCUS_03050	sequence03:67937..68446(+)	partial			WP_003549021.1	30S ribosomal protein S7	71.0	76.9	85.0
MGA_323	LOCUS_03220	sequence03:88014..88523(+)	partial			WP_011254204.1	hypothetical protein	74.0	75.8	40.0
MGA_328	LOCUS_03270	sequence03:91440..92156(-)	partial			WP_000080028.1	response regulator	68.9	67.5	33.9
MGA_356	LOCUS_03540	sequence04:15925..16509(+)	partial			WP_003563024.1	hydrolase	45.9	39.0	74.2
MGA_379	LOCUS_03770	sequence04:39181..39768(-)	partial			WP_010890088.1	restriction endonuclease subunit S	96.9	45.4	26.6
MGA_381	LOCUS_03790	sequence04:40942..42132(+)	partial			WP_011022386.1	restriction endonuclease subunit S	68.7	70.1	30.9
MGA_383	LOCUS_03810	sequence04:42317..42820(-)	partial			WP_045861227.1	restriction endonuclease subunit S	77.8	27.0	52.3
MGA_386	LOCUS_03840	sequence04:46311..46649(+)	frameshift		46634	WP_015613286.1	nucleoside 2-deoxyribosyltransferase	92.0	65.2	75.7
MGA_394	LOCUS_03920	sequence04:53842..54753(-)	partial			WP_003234757.1	sodium ABC transporter ATP-binding protein NatA	67.7	83.7	42.0
MGA_396	LOCUS_03940	sequence04:55731..60236(-)	partial			WP_003549917.1	type I pullulanase	64.4	81.9	47.8
MGA_421	LOCUS_04180	sequence05:5342..9616(+)	frameshift,internal_stop_codon	5297..5299(+),5336..5338(+)	5277	WP_013399748.1	Rib/alpha-like domain-containing protein	74.3	34.1	23.4
MGA_422	LOCUS_04190	sequence05:9858..10118(+)	partial			WP_011016071.1	carboxylating nicotinate-nucleotide diphosphorylase	94.2	28.3	53.1
MGA_423	LOCUS_04200	sequence05:10390..12120(-)	partial			WP_012870273.1	type I restriction endonuclease subunit R	91.7	49.9	58.6
MGA_449	LOCUS_04460	sequence05:40918..41523(+)	frameshift		41496	WP_003549162.1	DNA mismatch repair endonuclease MutL	96.0	30.6	71.0
MGA_450	LOCUS_04470	sequence05:41520..42812(+)	frameshift		41496	WP_003549162.1	DNA mismatch repair endonuclease MutL	100.0	68.8	41.5
MGA_469	LOCUS_04660	sequence05:60210..60539(+)	partial			WP_003549212.1	hypothetical protein	84.4	74.6	44.1
MGA_477	LOCUS_04740	sequence05:67913..68104(+)	partial			WP_011254154.1	TIGR01906 family membrane protein	93.7	29.2	55.9
MGA_492	LOCUS_04880	sequence06:2167..3606(-)	partial			WP_011254051.1	CAP domain-containing protein	74.1	84.7	48.7
MGA_502	LOCUS_04980	sequence06:15257..16120(-)	partial			WP_003549642.1	helix-turn-helix transcriptional regulator	70.4	73.2	24.9
MGA_523	LOCUS_05190	sequence06:38312..39013(-)	partial			WP_013399434.1	anchored repeat-type ABC transporter ATP-binding subunit	81.1	72.5	37.2
MGA_612	LOCUS_06070	sequence07:37430..38518(+)	partial			WP_000873739.1	M15 family metallopeptidase	36.2	48.0	30.5
MGA_637	LOCUS_06310	sequence08:16690..17301(+)	partial			WP_003546273.1	glycoside hydrolase family 73 protein	75.9	71.6	56.5
MGA_638	LOCUS_06320	sequence08:17403..19013(+)	frameshift		18998	WP_003546275.1	DNA helicase PcrA	98.3	70.6	68.1
MGA_639	LOCUS_06330	sequence08:18979..19641(+)	frameshift		18998	WP_003546275.1	DNA helicase PcrA	96.8	29.1	62.9
MGA_646	LOCUS_06400	sequence08:27010..27681(+)	partial			WP_003548465.1	L,D-transpeptidase	72.2	70.7	61.7
MGA_650	LOCUS_06440	sequence08:31873..32814(+)	partial			WP_041272556.1	recombinase family protein	89.5	53.0	37.1
MGA_652	LOCUS_06460	sequence08:34300..34542(-)	frameshift,internal_stop_codon	34624..34626(-)	34311	WP_002680630.1	ABC transporter ATP-binding protein	96.2	16.4	70.1
MGA_653	LOCUS_06470	sequence08:34624..35070(-)	internal_stop_codon	35116..35118(-),34624..34626(-)		WP_002680630.1	ABC transporter ATP-binding protein	98.6	31.1	58.2
MGA_654	LOCUS_06480	sequence08:35116..35568(-)	internal_stop_codon	35116..35118(-)		WP_002680630.1	ABC transporter ATP-binding protein	100.0	32.3	60.5
MGA_685	LOCUS_06770	sequence09:22570..23715(+)	partial			WP_197693007.1	site-specific DNA-methyltransferase	87.1	55.6	39.9
MGA_688	LOCUS_06800	sequence09:24993..25304(+)	frameshift		25355,25259	WP_011861353.1	DUF6017 domain-containing protein	83.5	25.6	91.9
MGA_689	LOCUS_06810	sequence09:25660..25974(+)	internal_stop_codon	25624..25626(+)		WP_011861353.1	DUF6017 domain-containing protein	100.0	30.7	66.3
MGA_691	LOCUS_06830	sequence09:26213..26458(+)	frameshift		26123	WP_011860783.1	PcfB family protein	100.0	50.3	74.1
MGA_692	LOCUS_06840	sequence09:26455..26814(+)	frameshift		26796	WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	95.8	19.2	88.6
MGA_693	LOCUS_06850	sequence09:26781..28121(+)	frameshift		26796	WP_011861117.1	type IV secretory system conjugative DNA transfer family protein	96.6	78.8	72.5
MGA_727	LOCUS_07170	sequence11:14306..14560(+)	partial			WP_003547810.1	ribosomal L7Ae/L30e/S12e/Gadd45 family protein	90.5	74.8	51.9
MGA_752	LOCUS_07390	sequence13:176..1036(-)	frameshift		202	WP_003643484.1	Mur ligase family protein	94.8	61.0	40.5
MGA_773	LOCUS_07590	sequence14:1072..1572(-)	partial			WP_000227333.1	polymorphic toxin type 50 domain-containing protein	83.7	31.0	31.7
MGA_774	LOCUS_07600	sequence14:1482..1901(-)	partial			WP_013389859.1	phage antirepressor Ant	75.5	40.5	48.6
MGA_780	LOCUS_07660	sequence14:4149..4868(+)	partial			WP_010905339.1	S24 family peptidase	66.5	56.1	35.8
MGA_781	LOCUS_07670	sequence14:4911..5228(+)	partial			WP_000580488.1	XRE family transcriptional regulator	96.2	43.9	34.9
MGA_791	LOCUS_07770	sequence14:16339..>17254(-)	partial			WP_003548513.1	MDR family MFS transporter	98.7	61.9	53.0
MGA_799	LOCUS_07840	sequence15:3641..4048(+)	frameshift		4024	WP_021721658.1	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	94.8	56.9	64.1
MGA_800	LOCUS_07850	sequence15:4105..4317(+)	frameshift		4036	WP_021721658.1	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	100.0	31.1	77.1
MGA_814	LOCUS_07980	sequence16:1..531(+)	partial			WP_117530778.1	cytosine deaminase	100.0	42.8	65.3
MGA_830	LOCUS_08130	sequence17:1..537(+)	partial			WP_003242595.1	RNA polymerase factor sigma-54	91.6	38.1	36.7
MGA_858	LOCUS_08370	sequence19:1579..1749(-)	frameshift		1732	WP_029779745.1	F0F1 ATP synthase subunit C	100.0	75.7	71.4
MGA_871	LOCUS_08490	sequence20:526..912(+)	frameshift		888	WP_011254490.1	YqeG family HAD IIIA-type phosphatase	93.8	69.0	62.5
MGA_874	LOCUS_08520	sequence20:2786..3262(+)	frameshift		3229	WP_003548313.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	93.7	73.9	64.9
MGA_875	LOCUS_08530	sequence20:3228..3392(+)	frameshift		3229	WP_003548313.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	85.2	23.1	65.2
MGA_886	LOCUS_08630	sequence21:1..1182(+)	partial			WP_003546854.1	DNA internalization-related competence protein ComEC/Rec2	94.7	49.1	50.0
MGA_907	LOCUS_08820	sequence22:6243..6764(-)	partial			WP_003644407.1	lipoprotein	100.0	59.2	32.8
MGA_915	LOCUS_08900	sequence22:11152..>11882(-)	partial			WP_003547931.1	DNA repair protein RecN	100.0	43.2	60.3
MGA_926	LOCUS_09000	sequence24:174..758(-)	frameshift,internal_stop_codon	210..212(-)	230	WP_010942532.1	RNA polymerase factor sigma-54	51.5	20.8	33.0
MGA_936	LOCUS_09100	sequence24:10625..>11147(-)	partial			WP_003548294.1	phenylalanine--tRNA ligase subunit beta	100.0	21.9	56.2
MGA_942	LOCUS_09150	sequence25:2748..3152(-)	partial			WP_075917325.1	translation initiation factor IF-3	94.8	72.3	75.0
MGA_946	LOCUS_09190	sequence25:7182..7916(-)	frameshift		7208	WP_003548343.1	DnaD domain protein	95.9	52.2	44.4
MGA_950	LOCUS_09230	sequence25:9824..>11033(-)	partial			WP_003548351.1	DNA polymerase I	100.0	45.4	72.4
MGA_957	LOCUS_09290	sequence26:8464..9444(-)	partial			WP_003547594.1	hypothetical protein	71.2	69.2	32.8
MGA_962	LOCUS_09310	sequence27:3640..5511(+)	partial			WP_003549917.1	type I pullulanase	96.3	51.2	55.8
MGA_973	LOCUS_09410	sequence28:7368..7502(+)	frameshift		7469	WP_003546366.1	amino acid ABC transporter ATP-binding protein	75.0	13.4	84.8
MGA_974	LOCUS_09420	sequence28:7522..8115(+)	frameshift		7469	WP_003546366.1	amino acid ABC transporter ATP-binding protein	99.0	79.3	79.5
MGA_992	LOCUS_09560	sequence30:1703..2254(+)	frameshift		2221	WP_011254531.1	ABC transporter ATP-binding protein	94.5	47.9	78.6
MGA_993	LOCUS_09570	sequence30:2214..2813(+)	frameshift		2221	WP_011254531.1	ABC transporter ATP-binding protein	96.5	52.4	63.5
MGA_1000	LOCUS_09640	sequence30:8349..8708(-)	partial			WP_003546611.1	Cof-type HAD-IIB family hydrolase	100.0	41.2	55.8
MGA_1015	LOCUS_09780	sequence33:141..1643(+)	partial			WP_010989477.1	helix-turn-helix domain-containing protein	44.8	44.7	22.9
MGA_1021	LOCUS_09840	sequence33:7510..>8430(-)	partial			WP_011254584.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	99.7	58.3	73.4
MGA_1048	LOCUS_10070	sequence36:6335..6577(-)	frameshift		6648	WP_002262593.1	acyl-CoA thioester hydrolase/BAAT C-terminal domain-containing protein	83.8	20.1	38.2
MGA_1049	LOCUS_10080	sequence36:6640..7020(-)	frameshift,internal_stop_codon	7045..7047(-)	6648	WP_002262593.1	acyl-CoA thioester hydrolase/BAAT C-terminal domain-containing protein	98.4	35.4	45.2
MGA_1077	LOCUS_10320	sequence40:896..1081(+)	partial			WP_011861845.1	helix-turn-helix transcriptional regulator	78.7	72.7	72.9
MGA_1078	LOCUS_10330	sequence40:1276..1452(-)	frameshift,internal_stop_codon	1430..1432(-)	1414	WP_108806778.1	recombinase family protein	81.0	9.0	91.5
MGA_1086	LOCUS_10410	sequence40:5313..5927(+)	frameshift		5305,5110	WP_000837499.1	XRE/MutR family transcriptional regulator	99.5	71.8	73.5
MGA_1087	LOCUS_10420	sequence40:5981..6316(-)	internal_stop_codon	6449..6451(-),6350..6352(-)		WP_168549381.1	SAG1250 family conjugative relaxase	98.2	17.6	67.9
MGA_1092	LOCUS_10450	sequence41:3727..4188(+)	frameshift		4164	WP_011254249.1	30S ribosomal protein S4	92.8	70.0	81.7
MGA_1100	LOCUS_10530	sequence42:3613..4395(-)	frameshift		4415	WP_003547116.1	CCA tRNA nucleotidyltransferase	99.2	64.7	55.8
MGA_1101	LOCUS_10540	sequence42:4410..5000(-)	frameshift		4430	WP_003547116.1	CCA tRNA nucleotidyltransferase	63.3	31.1	75.8
MGA_1103	LOCUS_10560	sequence42:5918..>6580(-)	partial			WP_002263274.1	amidase	96.4	44.4	37.7
MGA_1112	LOCUS_10640	sequence43:3868..>6566(-)	partial			WP_101886507.1	InlB B-repeat-containing protein	18.4	6.0	25.3
MGA_1113	LOCUS_10650	sequence44:1..579(+)	partial			WP_003547131.1	ribosome biogenesis GTPase YlqF	99.0	66.9	65.3
MGA_1126	LOCUS_10760	sequence46:1331..1516(+)	internal_stop_codon	1262..1264(+)		WP_004117505.1	type II toxin-antitoxin system RelB/DinJ family antitoxin	100.0	67.0	93.4
MGA_1130	LOCUS_10800	sequence46:4115..4309(+)	internal_stop_codon	4067..4069(+)		WP_002665927.1	type II toxin-antitoxin system RelB/DinJ family antitoxin	96.9	68.9	69.4
MGA_1139	LOCUS_10860	sequence48:297..1082(-)	frameshift		311	WP_003547037.1	histidine--tRNA ligase	96.6	58.9	73.0
MGA_1145	LOCUS_10910	sequence49:1..520(+)	partial			WP_011254246.1	F0F1 ATP synthase subunit alpha	97.7	33.4	76.2
MGA_1154	LOCUS_10990	sequence50:9..323(-)	partial			WP_003546772.1	HAD family phosphatase	97.1	44.9	48.5
MGA_1158	LOCUS_11020	sequence50:4761..>5509(-)	partial			WP_003546762.1	tRNA 4-thiouridine(8) synthase ThiI	100.0	61.2	83.9
MGA_1161	LOCUS_11040	sequence51:3778..4452(+)	frameshift		4413	WP_003546123.1	amino acid permease	91.5	44.2	63.9
MGA_1162	LOCUS_11050	sequence51:4425..5156(+)	frameshift		4413	WP_003546123.1	amino acid permease	93.4	49.9	61.8
MGA_1173	LOCUS_11130	sequence53:1490..2395(-)	frameshift		2487	WP_003547544.1	asparagine--tRNA ligase	100.0	69.7	80.4
MGA_1174	LOCUS_11140	sequence53:2473..2805(-)	frameshift		2487	WP_003547544.1	asparagine--tRNA ligase	95.5	24.3	70.5
MGA_1176	LOCUS_11160	sequence53:3376..>4815(-)	partial			WP_011254365.1	helicase C-terminal domain-containing protein	99.2	50.8	45.0
MGA_1188	LOCUS_11250	sequence56:1..855(+)	partial			WP_011254392.1	plasma-membrane proton-efflux P-type ATPase	98.6	37.0	59.3
MGA_1189	LOCUS_11260	sequence56:861..2798(-)	partial			WP_003549917.1	type I pullulanase	97.2	52.7	48.0
MGA_1190	LOCUS_11270	sequence56:2916..>3454(-)	partial			WP_000129141.1	ABC transporter permease/substrate-binding protein	100.0	35.4	36.5
MGA_1197	LOCUS_11310	sequence58:1219..>3178(-)	partial			WP_011254366.1	helicase-exonuclease AddAB subunit AddA	99.7	54.3	51.6
MGA_1209	LOCUS_11390	sequence62:1027..1578(-)	partial			WP_153437736.1	ISNCY family transposase	64.5	24.6	39.0
