{ "type": "genome", "identifier": "GCA_022758925.1", "organism": "Burkholderiales bacterium", "title": "Burkholderiales bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Montana State University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_022758925.1", "bioproject": "PRJNA669531", "biosample": "SAMN16495501", "wgs_master": "JAEMQF000000000.1", "refseq_category": "na", "taxid": "1891238", "species_taxid": "1891238", "organism_name": "Burkholderiales bacterium", "infraspecific_name": "", "isolate": "2017_B01_C_4", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/03/29", "asm_name": "ASM2275892v1", "submitter": "Montana State University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/758/925/GCA_022758925.1_ASM2275892v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-03-29", "dateModified": "2022-03-29", "datePublished": "2022-03-29", "_annotation": { "sample_count": 1, "sample_organism": [ "Burkholderiales bacterium" ], "sample_taxid": [ "1891238" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: Yellowstone Lake, Wyoming" ], "sample_host_location_id": [], "data_size": "1.276 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 99.62, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "4618347", "Number of Sequences": "422", "Longest Sequences (bp)": "56570", "N50 (bp)": "13806", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "65.8", "Number of CDSs": "3991", "Average Protein Length": "311.5", "Coding Ratio (%)": "80.8", "Number of rRNAs": "0", "Number of tRNAs": "38", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Rubrivivax benzoatilyticus", "strain": "strain=JA2", "accession": "GCA_000190375.2", "taxid": 316997, "species_taxid": 316997, "relation_to_type": "type", "validated": true, "ani": 78.0738, "matched_fragments": 382, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrivivax benzoatilyticus", "strain": "strain=JA2", "accession": "GCA_000420125.1", "taxid": 316997, "species_taxid": 316997, "relation_to_type": "type", "validated": true, "ani": 78.0429, "matched_fragments": 395, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Schlegelella thermodepolymerans", "strain": "strain=DSM 15344", "accession": "GCA_003349825.1", "taxid": 215580, "species_taxid": 215580, "relation_to_type": "type", "validated": true, "ani": 77.9904, "matched_fragments": 348, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Schlegelella thermodepolymerans", "strain": "strain=DSM 15344", "accession": "GCA_002933415.1", "taxid": 215580, "species_taxid": 215580, "relation_to_type": "type", "validated": true, "ani": 77.9806, "matched_fragments": 352, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Schlegelella thermodepolymerans", "strain": "strain=DSM 15344", "accession": "GCA_015476235.1", "taxid": 215580, "species_taxid": 215580, "relation_to_type": "type", "validated": true, "ani": 77.9684, "matched_fragments": 362, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobacter gummiphilus", "strain": "strain=NBRC 109400", "accession": "GCA_002762215.1", "taxid": 946333, "species_taxid": 946333, "relation_to_type": "type", "validated": true, "ani": 77.7801, "matched_fragments": 360, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobacter gummiphilus", "strain": "strain=NS21", "accession": "GCA_002116905.1", "taxid": 946333, "species_taxid": 946333, "relation_to_type": "type", "validated": true, "ani": 77.7693, "matched_fragments": 361, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azohydromonas caseinilytica", "strain": "strain=G-1-1-14", "accession": "GCA_012927045.1", "taxid": 2728836, "species_taxid": 2728836, "relation_to_type": "type", "validated": true, "ani": 77.6496, "matched_fragments": 348, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paucibacter toxinivorans", "strain": "strain=DSM 16998", "accession": "GCA_004362525.1", "taxid": 270368, "species_taxid": 270368, "relation_to_type": "type", "validated": true, "ani": 77.6326, "matched_fragments": 354, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerotilus natans", "strain": "strain=ATCC 13338", "accession": "GCA_900156335.1", "taxid": 34103, "species_taxid": 34103, "relation_to_type": "type", "validated": true, "ani": 77.6188, "matched_fragments": 305, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ideonella azotifigens", "strain": "strain=DSM 21438", "accession": "GCA_006519715.1", "taxid": 513160, "species_taxid": 513160, "relation_to_type": "type", "validated": true, "ani": 77.4661, "matched_fragments": 268, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelomonas puraquae", "strain": "strain=CCUG 52769", "accession": "GCA_002205845.1", "taxid": 431059, "species_taxid": 431059, "relation_to_type": "type", "validated": true, "ani": 77.327, "matched_fragments": 294, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azohydromonas lata", "strain": "strain=NBRC 102462", "accession": "GCA_001571085.1", "taxid": 45677, "species_taxid": 45677, "relation_to_type": "type", "validated": true, "ani": 77.2127, "matched_fragments": 337, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mitsuaria chitinivorans", "strain": "strain=HWN-4", "accession": "GCA_002761755.1", "taxid": 2917965, "species_taxid": 2917965, "relation_to_type": "type", "validated": true, "ani": 77.1441, "matched_fragments": 336, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelomonas saccharophila", "strain": "strain=DSM 654", "accession": "GCA_004342485.1", "taxid": 304, "species_taxid": 304, "relation_to_type": "type", "validated": true, "ani": 77.1237, "matched_fragments": 339, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ideonella livida", "strain": "strain=TBM-1", "accession": "GCA_010499455.1", "taxid": 2707176, "species_taxid": 2707176, "relation_to_type": "type", "validated": true, "ani": 77.0019, "matched_fragments": 235, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter agri", "strain": "strain=G-1-2-2", "accession": "GCA_012927085.1", "taxid": 2728837, "species_taxid": 2728837, "relation_to_type": "type", "validated": true, "ani": 76.9702, "matched_fragments": 362, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseateles terrae", "strain": "strain=CECT 7247", "accession": "GCA_014192155.1", "taxid": 431060, "species_taxid": 431060, "relation_to_type": "type", "validated": true, "ani": 76.8792, "matched_fragments": 223, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia terrae", "strain": "strain=JCM 31606", "accession": "GCA_024753145.1", "taxid": 1811224, "species_taxid": 1811224, "relation_to_type": "type", "validated": true, "ani": 76.2682, "matched_fragments": 185, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia flava", "strain": "strain=LD6", "accession": "GCA_004359985.1", "taxid": 2547393, "species_taxid": 2547393, "relation_to_type": "type", "validated": true, "ani": 76.0802, "matched_fragments": 155, "total_fragments": 1322, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.62, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_016706565.1", "gtdb_species": "s__Piscinibacter sp016706565", "ani": 79.2724, "matched_fragments": 520, "total_fragments": 1322, "gtdb_taxonomy": 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