{
    "type": "genome",
    "identifier": "GCA_022767025.1",
    "organism": "Anaerostipes sp.",
    "title": "Anaerostipes sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "AAFC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022767025.1",
        "bioproject": "PRJNA629856",
        "biosample": "SAMN26525436",
        "wgs_master": "JALEPH000000000.1",
        "refseq_category": "na",
        "taxid": "1872530",
        "species_taxid": "1872530",
        "organism_name": "Anaerostipes sp.",
        "infraspecific_name": "",
        "isolate": "SUG212",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/31",
        "asm_name": "ASM2276702v1",
        "submitter": "AAFC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/767/025/GCA_022767025.1_ASM2276702v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-31",
    "dateModified": "2022-03-31",
    "datePublished": "2022-03-31",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Anaerostipes sp."
        ],
        "sample_taxid": [
            "1872530"
        ],
        "sample_host_organism": [
            "Sus scrofa domesticus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada:Lacombe"
        ],
        "sample_host_location_id": [],
        "data_size": "0.620 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2207289",
        "Number of Sequences": "184",
        "Longest Sequences (bp)": "75990",
        "N50 (bp)": "16076",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "36.5",
        "Number of CDSs": "2006",
        "Average Protein Length": "302.0",
        "Coding Ratio (%)": "82.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "42",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Anaerostipes faecalis",
                "strain": "strain=AGMB03513",
                "accession": "GCA_018982945.1",
                "taxid": 2738446,
                "species_taxid": 2738446,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.4481,
                "matched_fragments": 597,
                "total_fragments": 643,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Anaerostipes hadrus",
                "strain": "strain=DSM 3319",
                "accession": "GCA_000332875.2",
                "taxid": 649756,
                "species_taxid": 649756,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.3921,
                "matched_fragments": 252,
                "total_fragments": 643,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerostipes butyraticus",
                "strain": "strain=JCM 17466",
                "accession": "GCA_016586355.1",
                "taxid": 645466,
                "species_taxid": 645466,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.9801,
                "matched_fragments": 243,
                "total_fragments": 643,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerostipes rhamnosivorans",
                "strain": "strain=1y2",
                "accession": "GCA_005280655.1",
                "taxid": 1229621,
                "species_taxid": 1229621,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6543,
                "matched_fragments": 91,
                "total_fragments": 643,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerostipes hominis",
                "strain": "strain=BG01",
                "accession": "GCA_002270485.1",
                "taxid": 2025494,
                "species_taxid": 2025494,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.213,
                "matched_fragments": 99,
                "total_fragments": 643,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerobutyricum hallii",
                "strain": "strain=DSM 3353",
                "accession": "GCA_000173975.1",
                "taxid": 39488,
                "species_taxid": 39488,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1425,
                "matched_fragments": 64,
                "total_fragments": 643,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Blautia hansenii",
                "strain": "strain=DSM 20583",
                "accession": "GCA_002222595.2",
                "taxid": 1322,
                "species_taxid": 1322,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5349,
                "matched_fragments": 53,
                "total_fragments": 643,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Blautia hansenii",
                "strain": "strain=DSM 20583",
                "accession": "GCA_000156675.1",
                "taxid": 1322,
                "species_taxid": 1322,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.525,
                "matched_fragments": 52,
                "total_fragments": 643,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Blautia hansenii",
                "strain": "strain=DSM 20583",
                "accession": "GCA_025147655.1",
                "taxid": 1322,
                "species_taxid": 1322,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.525,
                "matched_fragments": 52,
                "total_fragments": 643,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_001940315.1",
                "gtdb_species": "s__Anaerostipes sp001940315",
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                "matched_fragments": 603,
                "total_fragments": 643,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.20",
                "min_intra_species_ani": "99.20",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCF_018918155.1",
                "gtdb_species": "s__Anaerostipes sp018918155",
                "ani": 79.5525,
                "matched_fragments": 287,
                "total_fragments": 643,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001404655.1",
                "gtdb_species": "s__Anaerostipes hadrus_A",
                "ani": 79.392,
                "matched_fragments": 252,
                "total_fragments": 643,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.11",
                "min_intra_species_ani": "98.66",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 9,
                "status": "-"
            },
            {
                "accession": "GCA_902362875.1",
                "gtdb_species": "s__Anaerostipes sp900066705",
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                "matched_fragments": 250,
                "total_fragments": 643,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.16",
                "min_intra_species_ani": "98.31",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_016586355.1",
                "gtdb_species": "s__Anaerostipes butyraticus",
                "ani": 78.9692,
                "matched_fragments": 243,
                "total_fragments": 643,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.19",
                "min_intra_species_ani": "99.02",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_900756035.1",
                "gtdb_species": "s__Anaerostipes sp900756035",
                "ani": 78.8606,
                "matched_fragments": 214,
                "total_fragments": 643,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_019114985.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes",
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                "mean_intra_species_ani": "99.16",
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                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 3,
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            },
            {
                "accession": "GCA_019119895.1",
                "gtdb_species": "s__Anaerostipes avistercoris",
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                "total_fragments": 643,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_905215045.1",
                "gtdb_species": "s__Anaerostipes sp905215045",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001940245.1",
                "gtdb_species": "s__Fimousia sp001940245",
                "ani": 77.5031,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Fimousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.44",
                "min_intra_species_ani": "99.44",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.97",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": 0.181,
        "cell_length": 0.5,
        "doubling_h": null,
        "growth_tmp": 37.75,
        "optimum_tmp": 39.5,
        "optimum_ph": 5.75,
        "genome_size": 3351944.437,
        "gc_content": 40.613,
        "coding_genes": 2835.5,
        "rRNA16S_genes": 9.0,
        "tRNA_genes": 70.0,
        "gram_stain": 1.0,
        "sporulation": 0.333,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
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        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
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        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
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    },
    "_gtdb_taxon": [
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        "p__Bacillota_A",
        "c__Clostridia",
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        "f__Lachnospiraceae",
        "g__Anaerostipes",
        "s__Anaerostipes faecalis"
    ],
    "_genome_taxon": [
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        "sp.",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Lachnospiraceae",
        "g__Anaerostipes",
        "s__Anaerostipes faecalis",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Lachnospirales",
        "Lachnospiraceae",
        "Anaerostipes",
        "Anaerostipes",
        "faecalis"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}