{
    "type": "genome",
    "identifier": "GCA_022767655.1",
    "organism": "Acholeplasmatales bacterium",
    "title": "Acholeplasmatales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "AAFC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022767655.1",
        "bioproject": "PRJNA629856",
        "biosample": "SAMN26525353",
        "wgs_master": "JALEMC000000000.1",
        "refseq_category": "na",
        "taxid": "2053494",
        "species_taxid": "2053494",
        "organism_name": "Acholeplasmatales bacterium",
        "infraspecific_name": "",
        "isolate": "SUG129",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/31",
        "asm_name": "ASM2276765v1",
        "submitter": "AAFC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/767/655/GCA_022767655.1_ASM2276765v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-31",
    "dateModified": "2022-03-31",
    "datePublished": "2022-03-31",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acholeplasmatales bacterium"
        ],
        "sample_taxid": [
            "2053494"
        ],
        "sample_host_organism": [
            "Sus scrofa domesticus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada:Lacombe"
        ],
        "sample_host_location_id": [],
        "data_size": "0.401 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 8.33,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1453586",
        "Number of Sequences": "64",
        "Longest Sequences (bp)": "84605",
        "N50 (bp)": "35833",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "29.5",
        "Number of CDSs": "1286",
        "Average Protein Length": "328.9",
        "Coding Ratio (%)": "87.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "36",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 8.33,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_003539625.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__ML615J-28;f__CAG-313;g__CAG-313",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.86",
                "min_intra_species_ani": "98.71",
                "mean_intra_species_af": "0.90",
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                "num_clustered_genomes": 5,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900538885.1",
                "gtdb_species": "s__UMGS75 sp900538885",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__ML615J-28;f__CAG-313;g__UMGS75",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.02",
                "min_intra_species_ani": "99.02",
                "mean_intra_species_af": "0.78",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900760745.1",
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                "matched_fragments": 134,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__ML615J-28;f__CAG-313;g__CAG-313",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900752975.1",
                "gtdb_species": "s__UMGS75 sp900752975",
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                "matched_fragments": 85,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__ML615J-28;f__CAG-313;g__UMGS75",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.98",
                "min_intra_species_ani": "99.98",
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                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900539265.1",
                "gtdb_species": "s__CAG-313 sp900539265",
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                "matched_fragments": 120,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__ML615J-28;f__CAG-313;g__CAG-313",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.57",
                "min_intra_species_ani": "99.54",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_000433035.1",
                "gtdb_species": "s__CAG-313 sp000433035",
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                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__ML615J-28;f__CAG-313;g__CAG-313",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.43",
                "min_intra_species_ani": "99.23",
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                "num_clustered_genomes": 6,
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            },
            {
                "accession": "GCA_900548675.1",
                "gtdb_species": "s__UMGS1109 sp900548675",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__ML615J-28;f__CAG-313;g__UMGS1109",
                "ani_circumscription_radius": 95.0,
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_015059015.1",
                "gtdb_species": "s__UBA1737 sp015059015",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__ML615J-28;f__CAG-313;g__UBA1737",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_017398545.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__ML615J-28;f__CAG-313;g__UBA1737",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_017937305.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900317575.1",
                "gtdb_species": "s__UBA1737 sp900317575",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__ML615J-28;f__CAG-313;g__UBA1737",
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                "mean_intra_species_ani": "100.00",
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                "num_clustered_genomes": 2,
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            },
            {
                "accession": "GCA_017411715.1",
                "gtdb_species": "s__UMGS1109 sp017411715",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__ML615J-28;f__CAG-313;g__UMGS1109",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 35.133,
        "optimum_tmp": 32.333,
        "optimum_ph": null,
        "genome_size": 1129154.375,
        "gc_content": 29.459,
        "coding_genes": 1029.45,
        "rRNA16S_genes": 2.222,
        "tRNA_genes": 35.428,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": 0.0,
        "facultative_respiration": 0.5,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.5,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 1.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__ML615J-28",
        "f__CAG-313",
        "g__CAG-313",
        "s__CAG-313 sp003539625"
    ],
    "_genome_taxon": [
        "Acholeplasmatales",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__ML615J-28",
        "f__CAG-313",
        "g__CAG-313",
        "s__CAG-313 sp003539625",
        "Bacteria",
        "Bacillota",
        "I",
        "Bacilli",
        "A",
        "ML615J-28",
        "CAG-313",
        "CAG-313",
        "CAG-313",
        "sp003539625"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}