{ "type": "genome", "identifier": "GCA_022767845.1", "organism": "Fusobacterium sp.", "title": "Fusobacterium sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "AAFC", "publication": [ {} ], "properties": { "assembly_accession": "GCA_022767845.1", "bioproject": "PRJNA629856", "biosample": "SAMN26525385", "wgs_master": "JALENI000000000.1", "refseq_category": "na", "taxid": "68766", "species_taxid": "68766", "organism_name": "Fusobacterium sp.", "infraspecific_name": "", "isolate": "SUG161", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/03/31", "asm_name": "ASM2276784v1", "submitter": "AAFC", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/767/845/GCA_022767845.1_ASM2276784v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-03-31", "dateModified": "2022-03-31", "datePublished": "2022-03-31", "_annotation": { "sample_count": 1, "sample_organism": [ "Fusobacterium sp." ], "sample_taxid": [ "68766" ], "sample_host_organism": [ "Sus scrofa domesticus" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Canada:Lacombe" ], "sample_host_location_id": [], "data_size": "0.459 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 1.85, "strain_heterogeneity": 75.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1683869", "Number of Sequences": "207", "Longest Sequences (bp)": "41689", "N50 (bp)": "10733", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "28.1", "Number of CDSs": "1439", "Average Protein Length": "315.2", "Coding Ratio (%)": "80.8", "Number of rRNAs": "1", "Number of tRNAs": "47", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Fusobacterium russii", "strain": "strain=593A", "accession": "GCA_000381725.1", "taxid": 854, "species_taxid": 854, "relation_to_type": "type", "validated": true, "ani": 79.9854, "matched_fragments": 262, "total_fragments": 456, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fusobacterium canifelinum", "strain": "strain=FDAARGOS_1126", "accession": "GCA_016724785.1", "taxid": 285729, "species_taxid": 285729, "relation_to_type": "type", "validated": true, "ani": 79.4091, "matched_fragments": 231, "total_fragments": 456, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fusobacterium hwasookii", "strain": "strain=KCOM 1249", "accession": "GCA_014217355.1", "taxid": 1583098, "species_taxid": 1583098, "relation_to_type": "type", 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