{
    "type": "genome",
    "identifier": "GCA_022769585.1",
    "organism": "Christensenella sp.",
    "title": "Christensenella sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "AAFC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022769585.1",
        "bioproject": "PRJNA629856",
        "biosample": "SAMN26525284",
        "wgs_master": "JALEJL000000000.1",
        "refseq_category": "na",
        "taxid": "1935934",
        "species_taxid": "1935934",
        "organism_name": "Christensenella sp.",
        "infraspecific_name": "",
        "isolate": "SUG60",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/31",
        "asm_name": "ASM2276958v1",
        "submitter": "AAFC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/769/585/GCA_022769585.1_ASM2276958v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-31",
    "dateModified": "2022-03-31",
    "datePublished": "2022-03-31",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Christensenella sp."
        ],
        "sample_taxid": [
            "1935934"
        ],
        "sample_host_organism": [
            "Sus scrofa domesticus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada:Lacombe"
        ],
        "sample_host_location_id": [],
        "data_size": "0.690 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 6.25,
        "strain_heterogeneity": 50.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2436349",
        "Number of Sequences": "42",
        "Longest Sequences (bp)": "203647",
        "N50 (bp)": "95465",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "55.5",
        "Number of CDSs": "2305",
        "Average Protein Length": "313.2",
        "Coding Ratio (%)": "88.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "53",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 6.25,
            "strain_heterogeneity": 50.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002320595.1",
                "gtdb_species": "s__UBA1685 sp002320595",
                "ani": 97.9386,
                "matched_fragments": 657,
                "total_fragments": 791,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-138;g__UBA1685",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.25",
                "min_intra_species_ani": "96.45",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 7,
                "status": "conclusive"
            },
            {
                "accession": "GCA_004560435.1",
                "gtdb_species": "s__UBA1685 sp004560435",
                "ani": 82.8262,
                "matched_fragments": 417,
                "total_fragments": 791,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-138;g__UBA1685",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.01",
                "min_intra_species_ani": "95.84",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_900546845.1",
                "gtdb_species": "s__UBA1685 sp900546845",
                "ani": 82.7295,
                "matched_fragments": 480,
                "total_fragments": 791,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-138;g__UBA1685",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.42",
                "min_intra_species_ani": "97.42",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017435905.1",
                "gtdb_species": "s__UBA1685 sp017435905",
                "ani": 78.6887,
                "matched_fragments": 239,
                "total_fragments": 791,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-138;g__UBA1685",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.49",
                "min_intra_species_ani": "98.49",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_015056105.1",
                "gtdb_species": "s__UBA1685 sp015056105",
                "ani": 78.6318,
                "matched_fragments": 204,
                "total_fragments": 791,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-138;g__UBA1685",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_004558525.1",
                "gtdb_species": "s__Phil1 sp004558525",
                "ani": 77.5154,
                "matched_fragments": 77,
                "total_fragments": 791,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-138;g__Phil1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.96",
                "min_intra_species_ani": "98.54",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_002482435.1",
                "gtdb_species": "s__UBA7707 sp002482435",
                "ani": 76.7205,
                "matched_fragments": 54,
                "total_fragments": 791,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-138;g__UBA7707",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900543475.1",
                "gtdb_species": "s__Pelethousia gallinarum",
                "ani": 76.5962,
                "matched_fragments": 51,
                "total_fragments": 791,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-138;g__Pelethousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.78",
                "min_intra_species_ani": "98.45",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 5,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.398,
        "cell_length": -0.097,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": 37.0,
        "optimum_ph": 7.5,
        "genome_size": 2745730.0,
        "gc_content": 50.4,
        "coding_genes": 2428.0,
        "rRNA16S_genes": 3.0,
        "tRNA_genes": 51.0,
        "gram_stain": null,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Christensenellales",
        "f__CAG-138",
        "g__UBA1685",
        "s__UBA1685 sp002320595"
    ],
    "_genome_taxon": [
        "Christensenella",
        "sp.",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Christensenellales",
        "f__CAG-138",
        "g__UBA1685",
        "s__UBA1685 sp002320595",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Christensenellales",
        "CAG-138",
        "UBA1685",
        "UBA1685",
        "sp002320595"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}