{
    "type": "genome",
    "identifier": "GCA_022771245.1",
    "organism": "Rikenellaceae bacterium",
    "title": "Rikenellaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "AAFC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022771245.1",
        "bioproject": "PRJNA629856",
        "biosample": "SAMN26525774",
        "wgs_master": "JALFCH000000000.1",
        "refseq_category": "na",
        "taxid": "2049048",
        "species_taxid": "2049048",
        "organism_name": "Rikenellaceae bacterium",
        "infraspecific_name": "",
        "isolate": "SUG550",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/03/31",
        "asm_name": "ASM2277124v1",
        "submitter": "AAFC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/771/245/GCA_022771245.1_ASM2277124v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-03-31",
    "dateModified": "2022-03-31",
    "datePublished": "2022-03-31",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Rikenellaceae bacterium"
        ],
        "sample_taxid": [
            "2049048"
        ],
        "sample_host_organism": [
            "Sus scrofa domesticus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada:Lacombe"
        ],
        "sample_host_location_id": [],
        "data_size": "0.594 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 96.97,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2073222",
        "Number of Sequences": "176",
        "Longest Sequences (bp)": "69262",
        "N50 (bp)": "17101",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "49.7",
        "Number of CDSs": "1493",
        "Average Protein Length": "379.9",
        "Coding Ratio (%)": "82.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "34",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 96.97,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900545245.1",
                "gtdb_species": "s__Cryptobacteroides sp900545245",
                "ani": 78.98,
                "matched_fragments": 117,
                "total_fragments": 602,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.89",
                "min_intra_species_ani": "96.83",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002440085.1",
                "gtdb_species": "s__Cryptobacteroides sp002440085",
                "ani": 78.482,
                "matched_fragments": 107,
                "total_fragments": 602,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002439805.1",
                "gtdb_species": "s__Cryptobacteroides sp002439805",
                "ani": 78.307,
                "matched_fragments": 106,
                "total_fragments": 602,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.45",
                "min_intra_species_ani": "99.16",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_002438905.1",
                "gtdb_species": "s__Cryptobacteroides sp002438905",
                "ani": 77.9979,
                "matched_fragments": 88,
                "total_fragments": 602,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_910585445.1",
                "gtdb_species": "s__Cryptobacteroides sp910585445",
                "ani": 77.8027,
                "matched_fragments": 60,
                "total_fragments": 602,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.74",
                "min_intra_species_ani": "96.72",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_009774765.1",
                "gtdb_species": "s__Cryptobacteroides sp009774765",
                "ani": 77.6582,
                "matched_fragments": 55,
                "total_fragments": 602,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.21",
                "min_intra_species_ani": "97.21",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_004554455.1",
                "gtdb_species": "s__Cryptobacteroides sp004554455",
                "ani": 77.4443,
                "matched_fragments": 72,
                "total_fragments": 602,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.35",
                "min_intra_species_ani": "97.49",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.75",
                "num_clustered_genomes": 12,
                "status": "-"
            },
            {
                "accession": "GCA_017938925.1",
                "gtdb_species": "s__Cryptobacteroides sp017938925",
                "ani": 77.0676,
                "matched_fragments": 75,
                "total_fragments": 602,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.18",
                "min_intra_species_ani": "96.33",
                "mean_intra_species_af": "0.77",
                "min_intra_species_af": "0.70",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_017694845.1",
                "gtdb_species": "s__Cryptobacteroides intestinavium",
                "ani": 76.7091,
                "matched_fragments": 51,
                "total_fragments": 602,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900760425.1",
                "gtdb_species": "s__Cryptobacteroides sp900760425",
                "ani": 76.6588,
                "matched_fragments": 62,
                "total_fragments": 602,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017560825.1",
                "gtdb_species": "s__Cryptobacteroides sp017560825",
                "ani": 76.3826,
                "matched_fragments": 58,
                "total_fragments": 602,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.79",
                "min_intra_species_ani": "95.07",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.69",
                "num_clustered_genomes": 4,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.6,
        "cell_length": -0.098,
        "doubling_h": null,
        "growth_tmp": 35.714,
        "optimum_tmp": 39.571,
        "optimum_ph": 7.0,
        "genome_size": 3089903.768,
        "gc_content": 53.851,
        "coding_genes": 2830.888,
        "rRNA16S_genes": 2.0,
        "tRNA_genes": 43.5,
        "gram_stain": 0.142,
        "sporulation": 0.0,
        "motility": 0.142,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 0.75,
        "thermophilic_range_tmp": 0.25,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.857,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.142,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__UBA932",
        "g__Cryptobacteroides",
        "s__Cryptobacteroides sp022771245"
    ],
    "_genome_taxon": [
        "Rikenellaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__UBA932",
        "g__Cryptobacteroides",
        "s__Cryptobacteroides sp022771245",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "UBA932",
        "Cryptobacteroides",
        "Cryptobacteroides",
        "sp022771245"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}