{
    "type": "genome",
    "identifier": "GCA_022776465.1",
    "organism": "Anaerobiospirillum succiniciproducens",
    "title": "Anaerobiospirillum succiniciproducens",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "AAFC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022776465.1",
        "bioproject": "PRJNA629856",
        "biosample": "SAMN26525928",
        "wgs_master": "JALFIF000000000.1",
        "refseq_category": "na",
        "taxid": "13335",
        "species_taxid": "13335",
        "organism_name": "Anaerobiospirillum succiniciproducens",
        "infraspecific_name": "",
        "isolate": "SUG704",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/01",
        "asm_name": "ASM2277646v1",
        "submitter": "AAFC",
        "gbrs_paired_asm": "GCF_022776465.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/776/465/GCA_022776465.1_ASM2277646v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-01",
    "dateModified": "2022-04-01",
    "datePublished": "2022-04-01",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Anaerobiospirillum succiniciproducens"
        ],
        "sample_taxid": [
            "13335"
        ],
        "sample_host_organism": [
            "Sus scrofa domesticus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada:Lacombe"
        ],
        "sample_host_location_id": [],
        "data_size": "0.978 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 2.08,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3426557",
        "Number of Sequences": "273",
        "Longest Sequences (bp)": "57847",
        "N50 (bp)": "17841",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "43.4",
        "Number of CDSs": "2001",
        "Average Protein Length": "381.7",
        "Coding Ratio (%)": "66.9",
        "Number of rRNAs": "5",
        "Number of tRNAs": "58",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Anaerobiospirillum succiniciproducens",
                "strain": "strain=DSM 6400",
                "accession": "GCA_000482845.1",
                "taxid": 13335,
                "species_taxid": 13335,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.0101,
                "matched_fragments": 908,
                "total_fragments": 998,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Anaerobiospirillum thomasii",
                "strain": "strain=NCTC12467",
                "accession": "GCA_900445255.1",
                "taxid": 179995,
                "species_taxid": 179995,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6843,
                "matched_fragments": 76,
                "total_fragments": 998,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Succinivibrio dextrinosolvens",
                "strain": "strain=DSM 3072",
                "accession": "GCA_900167015.1",
                "taxid": 83771,
                "species_taxid": 83771,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2769,
                "matched_fragments": 67,
                "total_fragments": 998,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 2.08,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000482845.1",
                "gtdb_species": "s__Anaerobiospirillum succiniciproducens",
                "ani": 97.0255,
                "matched_fragments": 907,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Succinivibrionaceae;g__Anaerobiospirillum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900543125.1",
                "gtdb_species": "s__Anaerobiospirillum sp900543125",
                "ani": 79.5038,
                "matched_fragments": 232,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Succinivibrionaceae;g__Anaerobiospirillum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.86",
                "min_intra_species_ani": "99.86",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_019113025.1",
                "gtdb_species": "s__Anaerobiospirillum stercoravium",
                "ani": 78.458,
                "matched_fragments": 110,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Succinivibrionaceae;g__Anaerobiospirillum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_019114785.1",
                "gtdb_species": "s__Anaerobiospirillum pullistercoris",
                "ani": 77.8242,
                "matched_fragments": 179,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Succinivibrionaceae;g__Anaerobiospirillum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018884035.1",
                "gtdb_species": "s__Anaerobiospirillum pullicola",
                "ani": 77.7744,
                "matched_fragments": 119,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Succinivibrionaceae;g__Anaerobiospirillum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900316175.1",
                "gtdb_species": "s__Succinivibrio sp900316175",
                "ani": 77.1376,
                "matched_fragments": 63,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Succinivibrionaceae;g__Succinivibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.29",
                "min_intra_species_ani": "98.66",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 9,
                "status": "-"
            },
            {
                "accession": "GCA_905186145.1",
                "gtdb_species": "s__Succinivibrio sp905186145",
                "ani": 77.1057,
                "matched_fragments": 73,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Succinivibrionaceae;g__Succinivibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002449335.1",
                "gtdb_species": "s__Succinivibrio sp002449335",
                "ani": 76.7698,
                "matched_fragments": 64,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Succinivibrionaceae;g__Succinivibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.89",
                "min_intra_species_ani": "95.86",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.222,
        "cell_length": 0.477,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": 3801392.5,
        "gc_content": 43.6,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": null,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 1.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Enterobacterales",
        "f__Succinivibrionaceae",
        "g__Anaerobiospirillum",
        "s__Anaerobiospirillum succiniciproducens"
    ],
    "_genome_taxon": [
        "Anaerobiospirillum",
        "succiniciproducens",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Enterobacterales",
        "f__Succinivibrionaceae",
        "g__Anaerobiospirillum",
        "s__Anaerobiospirillum succiniciproducens",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Enterobacterales",
        "Succinivibrionaceae",
        "Anaerobiospirillum",
        "Anaerobiospirillum",
        "succiniciproducens"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}