{ "tc_result": [ { "organism_name": "Treponema porcinum", "strain": "strain=ATCC BAA-908", "accession": "GCA_900167145.1", "taxid": 261392, "species_taxid": 261392, "relation_to_type": "type", "validated": true, "ani": 77.6181, "matched_fragments": 115, "total_fragments": 681, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Treponema berlinense", "strain": "strain=ATCC BAA-909", "accession": "GCA_900167025.1", "taxid": 225004, "species_taxid": 225004, "relation_to_type": "type", "validated": true, "ani": 77.3057, "matched_fragments": 74, "total_fragments": 681, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Treponema rectale", "strain": "strain=DSM 103679", "accession": "GCA_014202035.1", "taxid": 744512, "species_taxid": 744512, "relation_to_type": "suspected-type", "validated": true, "ani": 76.8944, "matched_fragments": 84, "total_fragments": 681, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Treponema 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"mean_intra_species_ani": "97.14", "min_intra_species_ani": "97.14", "mean_intra_species_af": "0.75", "min_intra_species_af": "0.75", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCA_017392945.1", "gtdb_species": "s__Treponema_D sp017392945", "ani": 79.0693, "matched_fragments": 252, "total_fragments": 681, "gtdb_taxonomy": "d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Treponematales;f__Treponemataceae;g__Treponema_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017386165.1", "gtdb_species": "s__Treponema_D sp017386165", "ani": 78.4954, "matched_fragments": 165, "total_fragments": 681, "gtdb_taxonomy": "d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Treponematales;f__Treponemataceae;g__Treponema_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000260795.1", "gtdb_species": "s__Treponema_D sp000260795", "ani": 78.1138, "matched_fragments": 120, "total_fragments": 681, "gtdb_taxonomy": "d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Treponematales;f__Treponemataceae;g__Treponema_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000619925.1", "gtdb_species": "s__Treponema_D sp000619925", "ani": 78.0972, "matched_fragments": 126, "total_fragments": 681, "gtdb_taxonomy": "d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Treponematales;f__Treponemataceae;g__Treponema_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": 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