{
    "type": "genome",
    "identifier": "GCA_022783145.1",
    "organism": "Clostridium sp.",
    "title": "Clostridium sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "AAFC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022783145.1",
        "bioproject": "PRJNA629856",
        "biosample": "SAMN26526100",
        "wgs_master": "JALFOV000000000.1",
        "refseq_category": "na",
        "taxid": "1506",
        "species_taxid": "1506",
        "organism_name": "Clostridium sp.",
        "infraspecific_name": "",
        "isolate": "SUG876",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/01",
        "asm_name": "ASM2278314v1",
        "submitter": "AAFC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/783/145/GCA_022783145.1_ASM2278314v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-01",
    "dateModified": "2022-04-01",
    "datePublished": "2022-04-01",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Clostridium sp."
        ],
        "sample_taxid": [
            "1506"
        ],
        "sample_host_organism": [
            "Sus scrofa domesticus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada:Lacombe"
        ],
        "sample_host_location_id": [],
        "data_size": "0.963 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 4.17,
        "strain_heterogeneity": 50.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3507587",
        "Number of Sequences": "454",
        "Longest Sequences (bp)": "129242",
        "N50 (bp)": "11377",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "28.3",
        "Number of CDSs": "3253",
        "Average Protein Length": "265.4",
        "Coding Ratio (%)": "73.8",
        "Number of rRNAs": "4",
        "Number of tRNAs": "58",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Terrisporobacter othiniensis",
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                "accession": "GCA_000808015.1",
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                "species_taxid": 1577792,
                "relation_to_type": "type",
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                "total_fragments": 920,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Terrisporobacter petrolearius",
                "strain": "strain=LAM0A37",
                "accession": "GCA_020748185.1",
                "taxid": 1460447,
                "species_taxid": 1460447,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 499,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "accession": "GCA_000439105.1",
                "taxid": 36841,
                "species_taxid": 36841,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 83.7247,
                "matched_fragments": 511,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Terrisporobacter mayombei",
                "strain": "strain=DSM 6539",
                "accession": "GCA_020748465.1",
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                "species_taxid": 1541,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.6692,
                "matched_fragments": 516,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Terrisporobacter glycolicus",
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                "species_taxid": 36841,
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                "ani": 83.6259,
                "matched_fragments": 515,
                "total_fragments": 920,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Romboutsia hominis",
                "strain": "strain=FRIFI",
                "accession": "GCA_900002575.1",
                "taxid": 1507512,
                "species_taxid": 1507512,
                "relation_to_type": "type",
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                "ani": 78.8112,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paraclostridium dentum",
                "strain": "strain=SKVG24",
                "accession": "GCA_012922555.1",
                "taxid": 2662455,
                "species_taxid": 2662455,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3974,
                "matched_fragments": 206,
                "total_fragments": 920,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paraclostridium bifermentans",
                "strain": "strain=ATCC 638",
                "accession": "GCA_006802875.1",
                "taxid": 1490,
                "species_taxid": 1490,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3852,
                "matched_fragments": 210,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paraclostridium bifermentans",
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                "accession": "GCA_000452245.2",
                "taxid": 1490,
                "species_taxid": 1490,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3594,
                "matched_fragments": 213,
                "total_fragments": 920,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paraclostridium bifermentans",
                "strain": "strain=DSM 14991",
                "accession": "GCA_019916025.1",
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                "species_taxid": 1490,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3168,
                "matched_fragments": 218,
                "total_fragments": 920,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 4.17,
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            {
                "accession": "GCA_900557165.1",
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                "total_fragments": 920,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Terrisporobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.06",
                "min_intra_species_ani": "99.06",
                "mean_intra_species_af": "0.78",
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                "num_clustered_genomes": 2,
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            },
            {
                "accession": "GCF_000808015.1",
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                "matched_fragments": 537,
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.48",
                "min_intra_species_ani": "99.45",
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                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_902363255.1",
                "gtdb_species": "s__Terrisporobacter sp902363255",
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                "matched_fragments": 535,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Terrisporobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_000439105.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Terrisporobacter",
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                "mean_intra_species_ani": "99.67",
                "min_intra_species_ani": "99.35",
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                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 3,
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            },
            {
                "accession": "GCF_900114105.1",
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                "matched_fragments": 503,
                "total_fragments": 920,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Terrisporobacter",
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                "min_intra_species_ani": "98.07",
                "mean_intra_species_af": "0.91",
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            },
            {
                "accession": "GCF_014333445.1",
                "gtdb_species": "s__Terrisporobacter mayombei",
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                "matched_fragments": 250,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Terrisporobacter",
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                "mean_intra_species_ani": "N/A",
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            {
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            {
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            },
            {
                "accession": "GCF_000452245.2",
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                "num_clustered_genomes": 7,
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            },
            {
                "accession": "GCF_017590215.1",
                "gtdb_species": "s__CCUG-7971 sp017590215",
                "ani": 78.1406,
                "matched_fragments": 284,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__CCUG-7971",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.16,
        "cell_length": 0.434,
        "doubling_h": 0.353,
        "growth_tmp": 33.457,
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        "genome_size": 4165901.003,
        "gc_content": 29.49,
        "coding_genes": 3796.985,
        "rRNA16S_genes": 9.374,
        "tRNA_genes": 78.312,
        "gram_stain": 0.945,
        "sporulation": 0.967,
        "motility": 0.92,
        "range_salinity": 0.0,
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        "mesophilic_range_tmp": 0.944,
        "thermophilic_range_tmp": 0.055,
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        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
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    "_gtdb_taxon": [
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        "p__Bacillota_A",
        "c__Clostridia",
        "o__Peptostreptococcales",
        "f__Peptostreptococcaceae",
        "g__Terrisporobacter",
        "s__Terrisporobacter sp022782605"
    ],
    "_genome_taxon": [
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        "sp.",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Peptostreptococcales",
        "f__Peptostreptococcaceae",
        "g__Terrisporobacter",
        "s__Terrisporobacter sp022782605",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Peptostreptococcales",
        "Peptostreptococcaceae",
        "Terrisporobacter",
        "Terrisporobacter",
        "sp022782605"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}