{
    "type": "genome",
    "identifier": "GCA_022784615.1",
    "organism": "Thomasclavelia ramosa",
    "title": "Thomasclavelia ramosa",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "AAFC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022784615.1",
        "bioproject": "PRJNA629856",
        "biosample": "SAMN26927395",
        "wgs_master": "JALFWG000000000.1",
        "refseq_category": "na",
        "taxid": "1547",
        "species_taxid": "1547",
        "organism_name": "Thomasclavelia ramosa",
        "infraspecific_name": "",
        "isolate": "SUG1069",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/01",
        "asm_name": "ASM2278461v1",
        "submitter": "AAFC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/784/615/GCA_022784615.1_ASM2278461v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-01",
    "dateModified": "2022-04-01",
    "datePublished": "2022-04-01",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Thomasclavelia ramosa"
        ],
        "sample_taxid": [
            "1547"
        ],
        "sample_host_organism": [
            "Sus scrofa domesticus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada:Lacombe"
        ],
        "sample_host_location_id": [],
        "data_size": "0.997 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3589800",
        "Number of Sequences": "62",
        "Longest Sequences (bp)": "320266",
        "N50 (bp)": "107456",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "31.3",
        "Number of CDSs": "3459",
        "Average Protein Length": "305.3",
        "Coding Ratio (%)": "88.3",
        "Number of rRNAs": "0",
        "Number of tRNAs": "40",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Erysipelatoclostridium ramosum",
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                "taxid": 1547,
                "species_taxid": 1547,
                "relation_to_type": "type",
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                "matched_fragments": 1009,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Erysipelatoclostridium ramosum",
                "strain": "",
                "accession": "GCA_900660185.1",
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                "species_taxid": 1547,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
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            },
            {
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                "status": "conclusive"
            },
            {
                "organism_name": "Erysipelatoclostridium ramosum",
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                "accession": "GCA_016027135.1",
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                "relation_to_type": "type",
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            },
            {
                "organism_name": "[Clostridium] cocleatum",
                "strain": "strain=I50",
                "accession": "GCA_010206155.1",
                "taxid": 69824,
                "species_taxid": 69824,
                "relation_to_type": "type",
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                "ani": 81.0162,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "[Clostridium] spiroforme",
                "strain": "strain=DSM 1552",
                "accession": "GCA_025149465.1",
                "taxid": 29348,
                "species_taxid": 29348,
                "relation_to_type": "type",
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                "ani": 80.0087,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "[Clostridium] spiroforme",
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                "accession": "GCA_000154805.1",
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                "species_taxid": 29348,
                "relation_to_type": "type",
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                "ani": 79.9834,
                "matched_fragments": 385,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Tannockella kyphosi",
                "strain": "strain=BP52G",
                "accession": "GCA_021054785.1",
                "taxid": 2899121,
                "species_taxid": 2899121,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Longibaculum muris",
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                "accession": "GCA_024622235.1",
                "taxid": 1796628,
                "species_taxid": 1796628,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Longibaculum muris",
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                "accession": "GCA_004343035.1",
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                "matched_fragments": 231,
                "total_fragments": 1161,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Coprobacillaceae;g__Erysipelatoclostridium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.66",
                "min_intra_species_ani": "99.35",
                "mean_intra_species_af": "0.93",
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            },
            {
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                "min_intra_species_ani": "98.04",
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                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCF_000686665.1",
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                "mean_intra_species_ani": "100.00",
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Coprobacillaceae;g__Erysipelatoclostridium",
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_ani": "N/A",
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            {
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            {
                "accession": "GCF_003480255.1",
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            },
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                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
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        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
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        "genome_size": null,
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        "coding_genes": null,
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        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
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        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
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        "p__Bacillota_I",
        "c__Bacilli_A",
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        "f__Coprobacillaceae",
        "g__Thomasclavelia",
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    ],
    "_genome_taxon": [
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        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
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        "s__Thomasclavelia ramosa",
        "Bacteria",
        "Bacillota",
        "I",
        "Bacilli",
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        "Erysipelotrichales",
        "Coprobacillaceae",
        "Thomasclavelia",
        "Thomasclavelia",
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    ],
    "_meo": [
        {
            "id": "MEO_0000054",
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        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}